FFCP PHASE1:Hg19::chr12:6716569..6716581,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1108 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1919 | |||
|TSSclassifier=strong | |||
|UniProt=F5GWX5 | |||
|association_with_transcript=8bp_to_ENST00000544040_5end | |||
|cluster_id=chr12:6716569..6716581,- | |||
|description=CAGE_peak_2_at_CHD4_5end | |||
|id=chr12:6716569..6716581,- | |||
|ontology_enrichment_celltype=CL:0002319!4.65e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.27e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.65e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!6.05e-08!31;DOID:1240!1.62e-07!39;DOID:3095!5.62e-07!22;DOID:2994!5.62e-07!22;DOID:162!6.86e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.27e-08;31!DOID:3095;6.18e-07;22!DOID:2994;6.18e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.05e-08,31;DOID:1240,1.62e-07,39;DOID:3095,5.62e-07,22;DOID:2994,5.62e-07,22;DOID:162,6.86e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@CHD4 | |||
}} |
Latest revision as of 00:50, 20 September 2015
Short description: | p2@CHD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000544040_5end |
EntrezGene: | CHD4 |
HGNC: | 1919 |
UniProt: | F5GWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.65e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.05e-08 | 31 |
leukemia | 1.62e-07 | 39 |
germ cell and embryonal cancer | 5.62e-07 | 22 |
germ cell cancer | 5.62e-07 | 22 |
cancer | 6.86e-07 | 235 |