FFCP PHASE1:Hg19::chr12:56730616..56730631,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:56730616..56730631,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:56730616..56730631,+ | |||
|id=chr12:56730616..56730631,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.31e-63!42;CL:0000860!7.81e-58!45;CL:0002009!4.72e-55!65;CL:0002194!1.75e-54!63;CL:0000576!1.75e-54!63;CL:0000040!1.75e-54!63;CL:0000559!1.75e-54!63;CL:0000763!4.25e-51!112;CL:0000049!4.25e-51!112;CL:0000037!6.57e-50!172;CL:0000566!6.57e-50!172;CL:0000557!3.74e-49!71;CL:0002032!3.40e-48!165;CL:0000837!3.40e-48!165;CL:0000839!1.37e-47!70;CL:0002087!1.98e-47!119;CL:0000766!8.87e-47!76;CL:0000988!6.22e-46!182;CL:0000738!4.45e-45!140;CL:0002031!5.56e-40!124;CL:0000134!5.63e-14!358;CL:0002320!2.62e-13!365;CL:0000219!1.17e-12!390;CL:0000034!8.82e-11!444;CL:0000048!1.07e-08!430;CL:0002322!2.60e-08!5;CL:0000723!2.62e-08!436;CL:0000945!5.32e-08!24;CL:0000826!5.32e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-83;33!CL:0002057;2.23e-83;33!CL:0000473;4.09e-56;39!CL:0000234;4.09e-56;39!CL:0000576;2.41e-45;48!CL:0000766;2.92e-26;69!CL:0000763;1.60e-16;100!CL:0002087;6.51e-15;104!CL:0000738;9.11e-09;136!CL:0000039;2.80e-08;7!CL:0000586;2.80e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-84,42;CL:0002057,1.32e-84,42;CL:0000473,5.16e-73,48;CL:0000234,5.16e-73,48;CL:0002009,2.05e-58,61;CL:0002194,8.78e-57,59;CL:0000576,8.78e-57,59;CL:0000040,8.78e-57,59;CL:0000559,8.78e-57,59;CL:0000557,1.59e-52,67;CL:0000839,5.32e-50,66;CL:0000763,4.98e-49,108;CL:0000049,4.98e-49,108;CL:0000766,3.19e-45,72;CL:0002032,2.53e-37,161;CL:0000837,2.53e-37,161;CL:0000037,3.13e-37,168;CL:0002087,1.30e-35,115;CL:0000988,7.91e-35,177;CL:0002031,8.02e-34,120;CL:0000738,1.17e-30,136;CL:0000134,2.52e-12,354;CL:0002320,6.90e-12,361;CL:0000219,2.38e-10,386;CL:0000034,3.48e-09,441;CL:0000048,1.79e-08,427;CL:0000723,3.24e-08,433;CL:0000039,3.25e-08,7;CL:0000586,3.25e-08,7;CL:0000785,4.21e-08,2;CL:0000955,4.21e-08,2;CL:0000818,4.21e-08,2;CL:0000954,4.21e-08,2;CL:0000816,4.21e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.85e-63;42!CL:0000049;8.80e-13;108!CL:0000954;4.29e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!8.32e-11!51;DOID:0060083!8.32e-11!51;DOID:8692!8.75e-09!31;DOID:1240!2.57e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.80e-42!80;UBERON:0001474!5.24e-38!86;UBERON:0002390!7.42e-38!102;UBERON:0003061!7.42e-38!102;UBERON:0002193!1.99e-34!112;UBERON:0004765!3.43e-30!101;UBERON:0001434!3.43e-30!101;UBERON:0002405!8.76e-29!115;UBERON:0002384!5.78e-13!375;UBERON:0002204!8.13e-13!167;UBERON:0003081!7.99e-12!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.99e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.05e-45,76;UBERON:0001474,1.57e-41,82;UBERON:0002390,3.05e-38,98;UBERON:0003061,3.05e-38,98;UBERON:0002405,3.08e-38,93;UBERON:0004765,3.77e-37,90;UBERON:0002193,6.13e-34,108;UBERON:0001434,1.18e-32,100;UBERON:0002204,2.20e-16,167;UBERON:0003081,3.57e-14,203;UBERON:0002384,2.72e-11,371;UBERON:0000926,6.47e-09,315;UBERON:0004120,6.47e-09,315;UBERON:0006603,6.47e-09,315;UBERON:0000473,3.40e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.157421562627358,0.393364276848904,0,0.464448369948228,0,0,0,0.619737604642413,0.710846162437108,0,2.76997704265939,1.40381113229099,2.38711957787437,0.223915474239924,0,0.515151135268373,0.581592955118259,1.13362783106643,3.15359279544161,3.0215774797739,2.87817521615278,5.57471467611186,4.89077066947656,3.33008918487831,5.20260905754887,13.1003358679915,23.2374486090177,4.06279459783025,1.31769637679823,1.91034305040492,2.47195832889593,18.0589496498833,14.7627352455003,20.4587880255693,0.659702600373432,1.19678194572979,0.852449501065388,33.0838532036586,36.3126543802329,49.2029576706504,1.25624332628372,3.12889751052121,2.38907729175628,22.3997815974346,43.4567610465326,52.8492187026277,0.211255286311942,0.425208599930087,0.419317291016752,1.68492946719743,1.05123824989054,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.265059536642971,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.245040215981032,0.743212700502875,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0,0.642352300414798,2.01799707191048,2.55507742614196,9.96165499791718,0.921722292925374,0.223676107892416,0.667396566847634,1.9538809540204,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,2.55786185113436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0.54323685961004,0,0,0,0,0,0,11.279783030859,9.01887657861602,10.4049383925022,0,0,0,0,0,0,1.99052386215701,0,0,0,0,0,0,0,0,2.37191225980366,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72562661089452,0,0,0,0.137539436597234,0,2.4747128070665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59788161329744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,1.01988829741982,1.3360870263278,1.37842349302267,3.50990555009325,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,2.56454793842586 | |||
|short_description=p@chr12:56730616..56730631,+ | |||
}} |
Latest revision as of 10:25, 24 July 2015
Short description: | p@chr12:56730616..56730631, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56730616..56730631, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.05e-45 | 76 |
bone element | 1.57e-41 | 82 |
hematopoietic system | 3.05e-38 | 98 |
blood island | 3.05e-38 | 98 |
immune system | 3.08e-38 | 93 |
skeletal element | 3.77e-37 | 90 |
hemolymphoid system | 6.13e-34 | 108 |
skeletal system | 1.18e-32 | 100 |
musculoskeletal system | 2.20e-16 | 167 |
lateral plate mesoderm | 3.57e-14 | 203 |
connective tissue | 2.72e-11 | 371 |
mesoderm | 6.47e-09 | 315 |
mesoderm-derived structure | 6.47e-09 | 315 |
presumptive mesoderm | 6.47e-09 | 315 |
testis | 3.40e-07 | 8 |