FFCP PHASE1:Hg19::chr12:54688606..54688642,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:54688606..54688642,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr12:54688606..54688642,- | |||
|id=chr12:54688606..54688642,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.22e-17;2!CL:0000558;6.22e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.97e-17,2;CL:0000765,5.97e-17,2;CL:0000050,5.97e-17,2;CL:0000038,5.97e-17,2;CL:0000558,5.97e-17,2;CL:0000547,5.97e-17,2;CL:0000549,5.97e-17,2;CL:0000550,5.97e-17,2;CL:0000552,5.97e-17,2;CL:0000763,6.16e-10,108;CL:0000049,6.16e-10,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!7.03e-11!8;DOID:8692!2.49e-10!31;DOID:1240!6.92e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.74e-35;8!DOID:8692;2.51e-28;31!DOID:1240;1.17e-17;39!DOID:2531;1.98e-11;51!DOID:0060083;1.98e-11;51!DOID:8552;3.98e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.18e-35,8;DOID:8692,7.46e-29,31;DOID:1240,1.42e-22,39;DOID:2531,7.65e-17,51;DOID:0060083,7.65e-17,51;DOID:8552,4.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.95e-25!115;UBERON:0000178!4.15e-15!15;UBERON:0000179!4.15e-15!15;UBERON:0000463!4.15e-15!15;UBERON:0002308!2.82e-11!9;UBERON:0000125!2.82e-11!9;UBERON:0009663!3.28e-11!7;UBERON:0001049!2.48e-09!57;UBERON:0005068!2.48e-09!57;UBERON:0006241!2.48e-09!57;UBERON:0007135!2.48e-09!57;UBERON:0000369!2.95e-09!4;UBERON:0002435!2.95e-09!4;UBERON:0000204!2.95e-09!4;UBERON:0010082!2.95e-09!4;UBERON:0002420!1.55e-08!9;UBERON:0007245!1.55e-08!9;UBERON:0010009!1.55e-08!9;UBERON:0010011!1.55e-08!9;UBERON:0000454!1.55e-08!9;UBERON:0001893!1.94e-08!34;UBERON:0002780!1.12e-07!41;UBERON:0001890!1.12e-07!41;UBERON:0006240!1.12e-07!41;UBERON:0002791!1.52e-07!33;UBERON:0005383!1.55e-07!3;UBERON:0005382!1.55e-07!3;UBERON:0003080!2.03e-07!42;UBERON:0001017!2.64e-07!82;UBERON:0002020!3.50e-07!34;UBERON:0003528!3.50e-07!34;UBERON:0002616!9.27e-07!59;UBERON:0005743!9.73e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.35e-43;15!UBERON:0000179;2.35e-43;15!UBERON:0000463;2.35e-43;15!UBERON:0002390;2.14e-22;32!UBERON:0002193;2.87e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.35e-43,15;UBERON:0000179,2.35e-43,15;UBERON:0000463,2.35e-43,15;UBERON:0007023,7.20e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,10.5244740790049,11.5031598450956,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,112.145921640309,132.282236835631,72.9148399582928,44.5493420106065,43.6044009471366,81.0591638990897,90.1852500187652,88.8300197449583,0.640944426764839,0,0,0,0,0,0.637705090915289,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,18.4631098421569,4.8682022125677,0,8.45922030527097,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,38.3172947755104,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,2.49317522850235,14.4381222794996,16.4692528826901,14.0970133059708,1.70778359451767,1.27149263184303,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0.604651252380536,0,0,0.393915911536118,0.247247575143499,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0.5085370753095,0,0,0,0,10.0152875314194,0,0,0,1.32506888912221,0.129282956361551,0,0,0,0.320362237703084,4.08731193259131,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0,1.86927875123374,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0.267964130156178,0,0.413731983447581,0,0.476128862927481,0.129177819672012,0.186224142887574,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:54688606..54688642,- | |||
}} |
Latest revision as of 10:00, 24 July 2015
Short description: | p@chr12:54688606..54688642, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54688606..54688642, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.97e-17 | 2 |
erythroblast | 5.97e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 5.97e-17 | 2 |
erythroid progenitor cell | 5.97e-17 | 2 |
reticulocyte | 5.97e-17 | 2 |
proerythroblast | 5.97e-17 | 2 |
basophilic erythroblast | 5.97e-17 | 2 |
polychromatophilic erythroblast | 5.97e-17 | 2 |
orthochromatic erythroblast | 5.97e-17 | 2 |
myeloid cell | 6.16e-10 | 108 |
common myeloid progenitor | 6.16e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 2.35e-43 | 15 |
haemolymphatic fluid | 2.35e-43 | 15 |
organism substance | 2.35e-43 | 15 |
adult organism | 7.20e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.18e-35 | 8 |
myeloid leukemia | 7.46e-29 | 31 |
leukemia | 1.42e-22 | 39 |
hematologic cancer | 7.65e-17 | 51 |
immune system cancer | 7.65e-17 | 51 |
chronic myeloid leukemia | 4.15e-09 | 1 |