FFCP PHASE1:Hg19::chr12:54519919..54519965,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENST00000508564_5end | |||
|cluster_id=chr12:54519919..54519965,+ | |||
|description=CAGE_peak_2_at_ENST00000508564_5end | |||
|id=chr12:54519919..54519965,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.60e-10!180;CL:1000507!8.67e-08!12;CL:1000494!8.67e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.85e-12;10!CL:1000494;8.85e-12;10!CL:1000449;2.31e-08;15!CL:1000497;4.20e-08;17!CL:0002518;4.20e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.51e-11,10;CL:1000494,1.51e-11,10;CL:1000449,3.57e-08,15;CL:0000136,4.06e-08,15;CL:1000497,7.11e-08,17;CL:0002518,7.11e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.44e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.78e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.48e-08!45;UBERON:0002416!2.48e-08!45;UBERON:0009773!8.67e-08!12;UBERON:0001231!8.67e-08!12;UBERON:0004810!8.67e-08!12;UBERON:0002097!4.64e-07!40;UBERON:0000489!9.20e-07!32;UBERON:0006555!9.95e-07!17;UBERON:0005103!9.95e-07!17;UBERON:0000083!9.95e-07!17;UBERON:0009201!9.95e-07!17;UBERON:0004819!9.95e-07!17;UBERON:0006553!9.95e-07!17;UBERON:0003074!9.95e-07!17;UBERON:0003060!9.95e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.85e-12;10!UBERON:0009773;8.85e-12;10!UBERON:0001231;8.85e-12;10!UBERON:0004810;8.85e-12;10!UBERON:0000489;2.67e-10;29!UBERON:0002113;2.28e-08;24!UBERON:0011143;2.28e-08;24!UBERON:0006555;2.31e-08;15!UBERON:0004819;2.31e-08;15!UBERON:0001285;2.31e-08;15!UBERON:0007684;2.31e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.51e-11,10;UBERON:0000489,3.53e-10,31;UBERON:0006555,1.20e-08,16;UBERON:0004819,1.20e-08,16;UBERON:0002113,3.37e-08,26;UBERON:0003918,3.37e-08,26;UBERON:0011143,3.37e-08,26;UBERON:0005095,3.37e-08,26;UBERON:0007687,3.37e-08,26;UBERON:0004211,3.57e-08,15;UBERON:0009773,3.57e-08,15;UBERON:0001231,3.57e-08,15;UBERON:0001285,3.57e-08,15;UBERON:0007684,3.57e-08,15;UBERON:0004208,3.57e-08,15 | |||
|phase1_expression=1.99846217197612,2.35510576280081,1.40954404095971,1.0007329835313,2.68176656656373,1.74467704820074,0,2.52687949370732,4.96252693579693,1.47440361900905,0,0.436882744260345,2.90143676051299,1.73272894144065,0.994192127183747,0,0,0,0,0.246242116153576,0.612002073732759,0.940364164434263,0,0,0,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,2.00535164254356,2.02785126545153,0,3.40644409211845,0,0,0,1.44076983047484,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89853131913626,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0,0,0.134710672069688,0,0,0,2.57753575017176,0,1.1409436430889,5.38015249986484,5.40198693761318,4.37056949793955,3.51127016755621,0.204154171254893,0,0.206651562351531,0,0,5.46096817162816,5.74894513452991,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0.85422955527427,1.48352330811693,0.600182192168805,1.44273540933814,1.03056216018252,1.30281799432113,0.337552664482532,0.779496041289589,1.51460264546469,2.94559675655358,2.26304479546337,1.06502877754984,1.10827308050404,0.67824236924195,0,0,0,0,0,0.929551542956147,0.518305275076852,0.252320850875628,0,0,0.643240938192885,0,5.10804720835177,5.77503585335668,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,2.94017422771084,0,0,0,0,0,0.343135620597051,0.439001141634502,1.1240175325762,1.40740561376283,0,0.977424915930974,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,1.79117045405697,4.06887513919547,3.83382679165211,0,0,0,0.576479813667846,0.25248486685276,2.03193261734941,0.763976851116555,5.86087236050235,0,1.54241239054985,2.70308752059526,3.71574362419752,0.112131084345361,0,0.1466765716419,0.387815147273333,14.3062578340753,0.845302752556,0,0,4.37252536245642,8.5109479213967,2.66422179016099,0.714889968290738,0,1.64648067356154,0.65147236858747,0,2.37585561880029,1.50719688529793,0,0.699810938274399,0,0,0,0,0,2.85273810081437,0.579125226670317,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.96306386750624,4.00136416847742,4.88277042659524,0,0,0,0,2.10662269809403,2.27407504055985,3.10419213877515,0,1.10621501125022,1.99832313276591,0.195801157462741,0,0,0,0,0.909382714338778,0,4.5358543999452,0.744323423456331,0.767309866440312,2.52594084989766,1.15325234330131,1.02341449813341,0.482561763430822,1.48418066444991,2.15893571323718,2.13074070375753,1.47828880824856,2.59627214591811,2.44041794765914,0,0,0,0,0,0,4.06079651616671,3.23464415838542,10.1965469992991,7.30696123266303,3.16654886678627,0,0.170093705276516,0.215915916102139,3.08454505380579,2.43851793789468,8.52872615553251,2.29388645740534,4.15538004464362,3.1342465661105,0,0,0,0,0,0.9273691048295,0,0,2.29706215198469,1.30012049207304,1.6068392984416,2.80345083047154,1.3864375540318,0.614014698904518,2.75673144969061,3.22260734604821,4.49551751134108,2.38634556765083,0.445160178233687,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0.869932992075073,0,0,0,0,0,0.511795582622668,0.42793898803392,0,0,0.719489830333259,1.37268514868027,1.29593642580255,0.606547444719948,0,0,0.975267478179181,3.41198885483798,1.05650146756755,0.136499911407986,0,1.13008116620243,0,0,0,1.15755106853338,0.655894752046633,2.23201414658974,1.239293992399,0.281695602532241,1.57752487424457,0.491245205065606,1.426684205925,1.06428319221179,2.9555068941673,2.63435914367922,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0.63337622438398,0.996239941255349,0.828851746593443,5.03865495708552,1.53403023753232,6.27732507851454,0.622079175323615,0,0,0,1.28236427328014,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0.295547618953547,0.438770794307945,0,0.278847488557207,1.53900517007594,0,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.707660516026713,1.22206028986725,3.55825354416746,4.07760998523459,4.9078316267564,0.808813595768125,1.60515529459758,0.468528891450678,0,0,0,0.394584402849391,2.41981432097328,0,1.01098527405581,1.35291077473043,1.45163467956146,0,0,0,0,2.56148591426813,0,0,0,0,1.39781334593624,0.687944129886466,0,0,0,1.74580229679155,1.1473296469895,0.677942222341597,0,0.397429223405979,0.379864775735272,0.586654148204409,0,1.70762395791482,0.19980960958213,2.88180834308212,0,0,0,2.73355578243952,0,0,0,0,0,0,0.547621515567972,0,1.28929632425987,0.262887354279314,0.837847203816763,0.687481272035051,0,0.599037001496973,0,0,0.134366944973453,1.4411995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| |||
|short_description=p2@ENST00000508564 | |||
}} |
Latest revision as of 09:59, 24 July 2015
Short description: | p2@ENST00000508564 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000508564_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000508564_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.51e-11 | 10 |
nephron tubule epithelial cell | 1.51e-11 | 10 |
epithelial cell of nephron | 3.57e-08 | 15 |
fat cell | 4.06e-08 | 15 |
kidney cell | 7.11e-08 | 17 |
kidney epithelial cell | 7.11e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.51e-11 | 10 |
cavitated compound organ | 3.53e-10 | 31 |
excretory tube | 1.20e-08 | 16 |
kidney epithelium | 1.20e-08 | 16 |
kidney | 3.37e-08 | 26 |
kidney mesenchyme | 3.37e-08 | 26 |
upper urinary tract | 3.37e-08 | 26 |
kidney rudiment | 3.37e-08 | 26 |
kidney field | 3.37e-08 | 26 |
nephron epithelium | 3.57e-08 | 15 |
renal tubule | 3.57e-08 | 15 |
nephron tubule | 3.57e-08 | 15 |
nephron | 3.57e-08 | 15 |
uriniferous tubule | 3.57e-08 | 15 |
nephrogenic mesenchyme | 3.57e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.78e-07 | 14 |