FFCP PHASE1:Hg19::chr12:51785393..51785469,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4128 | |||
|TSSclassifier=strong | |||
|UniProt=F5H5H1 | |||
|association_with_transcript=0bp_to_ENST00000546163,uc010snh.1_5end | |||
|cluster_id=chr12:51785393..51785469,- | |||
|description=CAGE_peak_1_at_GALNT6_5end | |||
|id=chr12:51785393..51785469,- | |||
|ontology_enrichment_celltype=CL:0000839!2.82e-10!70;CL:0000557!1.52e-09!71;CL:0002139!3.83e-09!24;CL:0000071!1.29e-08!18;CL:0002546!1.29e-08!18;CL:0000115!2.14e-08!35;CL:0000766!2.72e-08!76;CL:0002057!5.59e-08!42;CL:0002009!6.44e-08!65;CL:0002194!1.12e-07!63;CL:0000576!1.12e-07!63;CL:0000040!1.12e-07!63;CL:0000559!1.12e-07!63;CL:0000763!8.71e-07!112;CL:0000049!8.71e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.43e-09;39!CL:0000234;1.43e-09;39!CL:0000860;1.97e-09;33!CL:0002057;1.97e-09;33!CL:0002139;2.08e-09;24!CL:0000071;7.47e-09;18!CL:0000115;7.45e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.40e-12,66;CL:0000557,3.10e-11,67;CL:0000766,7.92e-10,72;CL:0000473,1.08e-09,48;CL:0000234,1.08e-09,48;CL:0002009,1.83e-09,61;CL:0002139,2.76e-09,24;CL:0002194,3.25e-09,59;CL:0000576,3.25e-09,59;CL:0000040,3.25e-09,59;CL:0000559,3.25e-09,59;CL:0000071,9.49e-09,18;CL:0002546,9.49e-09,18;CL:0000115,1.03e-08,36;CL:0000860,6.13e-08,42;CL:0002057,6.13e-08,42;CL:0000763,9.40e-08,108;CL:0000049,9.40e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002546;7.47e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.27e-11!216;UBERON:0005631!2.95e-09!14;UBERON:0000158!2.95e-09!14;UBERON:0002193!6.96e-09!112;UBERON:0000480!1.06e-08!626;UBERON:0001986!1.29e-08!18;UBERON:0004638!1.29e-08!18;UBERON:0004852!1.29e-08!18;UBERON:0000467!1.31e-08!625;UBERON:0002371!4.66e-08!80;UBERON:0000487!2.17e-07!22;UBERON:0002390!3.11e-07!102;UBERON:0003061!3.11e-07!102;UBERON:0000468!5.74e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.47e-09;18!UBERON:0001986;7.47e-09;18!UBERON:0004852;7.47e-09;18!UBERON:0000487;1.02e-07;22!UBERON:0005631;4.22e-07;10!UBERON:0000158;4.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.60e-10,93;UBERON:0003081,2.25e-10,203;UBERON:0002193,8.28e-10,108;UBERON:0002371,1.52e-09,76;UBERON:0005631,2.12e-09,14;UBERON:0000158,2.12e-09,14;UBERON:0004638,9.49e-09,18;UBERON:0001986,9.49e-09,18;UBERON:0004852,9.49e-09,18;UBERON:0002390,4.67e-08,98;UBERON:0003061,4.67e-08,98;UBERON:0000487,1.26e-07,22;UBERON:0001474,2.99e-07,82 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,5.06599756336621,2.52687949370732,0,3.68600904752263,2.79120467188971,50.6783983342,38.2462118431258,0.247532705920093,0.331397375727916,4.70627602516243,4.21886169616784,2.19093027116212,1.46379839637152,1.23121058076788,2.24400760368678,0,0.85870796139317,3.14811177667634,2.76193807108566,2.52164238968239,2.29881650459848,1.8890587515283,3.14691421479123,2.68680578668049,5.10893206943051,11.0330546937471,18.3735610454733,10.7228662948368,0.0774672005803016,0.426507697462265,2.05520307534393,3.32397245119126,6.41742231904453,5.4252717678963,5.15005590751826,5.83008598834163,4.89393578504954,6.83371722263954,10.2026504795979,7.03493777444667,9.52959051313307,11.9238687526329,15.7950249156503,4.60307827715441,9.22178543504762,7.09446689665756,4.13694816883942,9.68227025375739,6.77132432971709,8.47090527941721,11.4620583024295,7.41587498668779,11.3251040177234,8.98601275813062,10.2293940127847,4.61791820261403,7.38015533200038,4.26224750532694,9.57690487474327,10.7803192691317,21.7987787148451,7.78870862295904,8.86520961314342,7.16723187526885,14.5295880632009,8.83866326370155,9.49387162322653,2.5350634357433,2.76385589954557,2.09658645508376,3.48218756554135,2.4028302854641,3.53596290733576,0.855038231223746,1.19350006319454,1.46131323011707,1.75996244461323,1.63841583378639,2.66852776159066,2.13365111283254,2.80277190925209,2.29900975981793,3.30522436392431,2.86216126360609,9.10740750575117,9.39579502993502,7.26319133437935,3.96513985737078,2.24203425192614,1.58030450865046,4.72103448273199,6.28817220398664,3.90642848099067,1.5046784585161,0.977766799900771,0.473447805734733,3.89653456815823,2.00538822393312,1.76763544484902,0.886135578334485,1.35401931882508,1.5370958367081,2.08094956095805,6.57751618414705,6.07970039128866,5.21645554323094,1.77943875794473,1.60524496853828,3.1360657141493,2.83273356743915,0.766440987203842,2.06176467289578,1.77113784413652,1.27426165729639,1.95325036156926,3.8018081777935,2.40920190524436,2.04778577847069,2.49861453104692,2.36777252044017,0.821127996921047,4.43534835094411,9.09296665663925,4.19990771260117,0,2.01210257911091,0.255725123687061,1.44575660953827,0,0.434539556882471,0,1.45990461090791,1.51255707462509,1.10864698731282,0.263504357079378,1.5062593682237,10.5645633604837,10.0111799551796,3.24547393654683,2.96020553408754,7.04677190749985,4.29283123749616,6.29194401858141,2.22874500797739,19.2799535145704,15.4842227119102,13.5384795626962,11.3061588384802,15.5214791397665,11.0047216776027,13.1666828918191,9.8198368484345,11.3845204059747,7.69857409358742,8.45941565929209,8.36299316290364,8.54217201418593,12.8682078121054,12.9622711661082,6.6081798930219,5.38870494302808,6.0810199460994,9.19899824795299,12.3404535743857,10.6257011479636,1.31780417436063,0,12.210633459991,0,0.12663051166458,0.397227542439656,0.573673241497627,1.06400514659507,1.68203280042692,2.1349799145941,0.98667019366864,0.622422070799533,2.42479209725439,1.47115712802113,0,0.576175924479999,3.74914290934075,9.98912245857026,7.41613368007784,6.57574194427925,5.40198693761318,4.37056949793955,6.32028630160118,7.34955016517616,6.01888154827663,3.92637968467909,10.6920257155385,3.21447008062124,10.9219363432563,9.3420358436111,6.73344455816265,5.63033339423839,5.54128230968366,5.26773145057006,4.90380473278431,2.25357088359895,1.02088964844019,12.3778848625315,1.92201649936711,2.54318281391474,27.0081986475962,7.21367704669072,3.86460810068444,4.83903826462134,10.126579934476,2.43592512902997,12.8741224864498,2.57739716198438,3.23292113637624,16.6854508482809,6.85114267947954,10.1736355386293,10.436086070818,9.54611422067921,6.02289650316908,2.31750041646231,2.91565490307268,2.32387885739037,1.34759371519982,1.7662459561294,1.45990943630332,10.9514672630871,4.5026865673502,4.14404764057442,0.464367928031979,2.16563844500876,2.24782920075703,1.34867752062481,3.61516544825223,1.98529150918309,1.74303555273925,3.55905928666645,1.8876383142423,1.37355025587742,1.53898862778556,5.16708818237254,7.01208869017229,1.2347220339942,0,0,0,0.590789906681404,3.97316789473185,13.2827513626563,0.343135620597051,7.13376855156066,16.8602629886429,14.0740561376283,6.20342582562148,3.25808305310325,5.19967392639789,2.88662684050547,0.927443239800615,0.469634776943287,4.33099343283221,4.1668696131895,2.47330397904978,11.0628615714299,7.72637545885385,8.8638122191463,17.5503198854428,12.1877553076757,5.62403003920662,6.04735661515894,9.92425680696705,0.268675568108545,2.90633938513962,4.98397482914775,5.41929561685538,13.1192166679707,20.940139669618,12.2501960404417,21.0824863822055,0.063497894292169,0,0,0,0.822619941626588,0.600686115687835,0,0.224262168690721,0,0.07333828582095,2.97324946242889,0,4.22651376278,6.64845291462176,5.2003718455683,2.82928111688356,0,3.19706614819319,0.142977993658148,1.08524321078289,4.93944202068461,7.49193223875591,0,1.58390374586686,10.8518175741451,9.58686804460323,8.99756920638513,7.29742683847143,8.03611346291402,4.216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| |||
|short_description=p1@GALNT6 | |||
}} |
Latest revision as of 20:18, 18 September 2015
Short description: | p1@GALNT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GALNT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546163, uc010snh.1_5end |
EntrezGene: | GALNT6 |
HGNC: | 4128 |
UniProt: | F5H5H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.40e-12 | 66 |
granulocyte monocyte progenitor cell | 3.10e-11 | 67 |
myeloid leukocyte | 7.92e-10 | 72 |
defensive cell | 1.08e-09 | 48 |
phagocyte | 1.08e-09 | 48 |
macrophage dendritic cell progenitor | 1.83e-09 | 61 |
endothelial cell of vascular tree | 2.76e-09 | 24 |
monopoietic cell | 3.25e-09 | 59 |
monocyte | 3.25e-09 | 59 |
monoblast | 3.25e-09 | 59 |
promonocyte | 3.25e-09 | 59 |
blood vessel endothelial cell | 9.49e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.49e-09 | 18 |
endothelial cell | 1.03e-08 | 36 |
classical monocyte | 6.13e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.13e-08 | 42 |
myeloid cell | 9.40e-08 | 108 |
common myeloid progenitor | 9.40e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.60e-10 | 93 |
lateral plate mesoderm | 2.25e-10 | 203 |
hemolymphoid system | 8.28e-10 | 108 |
bone marrow | 1.52e-09 | 76 |
extraembryonic membrane | 2.12e-09 | 14 |
membranous layer | 2.12e-09 | 14 |
blood vessel endothelium | 9.49e-09 | 18 |
endothelium | 9.49e-09 | 18 |
cardiovascular system endothelium | 9.49e-09 | 18 |
hematopoietic system | 4.67e-08 | 98 |
blood island | 4.67e-08 | 98 |
simple squamous epithelium | 1.26e-07 | 22 |
bone element | 2.99e-07 | 82 |