FFCP PHASE1:Hg19::chr12:27581768..27581772,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:27581768..27581772,+ | |||
|description=CAGE_peak_at_chr12:27581768..27581772,+ | |||
|id=chr12:27581768..27581772,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.34e-08;3!UBERON:0003353;6.34e-08;3!UBERON:0009497;4.80e-07;13 | |||
|ontology_enrichment_disease=DOID:14566!1.82e-12!239;DOID:162!2.36e-12!235;DOID:305!7.51e-12!106;DOID:0050687!3.24e-11!143;DOID:1749!4.33e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5662;4.22e-21;1!DOID:4929;3.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,7.72e-21,1;DOID:4929,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.64e-09!22;UBERON:0000956!6.21e-09!25;UBERON:0000203!6.21e-09!25;UBERON:0001869!2.17e-08!32;UBERON:0001950!5.30e-08!20;UBERON:0002020!1.23e-07!34;UBERON:0003528!1.23e-07!34;UBERON:0001893!1.49e-07!34;UBERON:0002791!2.86e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.53e-21;1!UBERON:0005056;1.53e-21;1!UBERON:0004176;1.53e-21;1!UBERON:0004913;4.22e-21;1!UBERON:0003703;4.22e-21;1!UBERON:0001174;4.22e-21;1!UBERON:0004914;4.22e-21;1!UBERON:0002394;9.44e-21;4!UBERON:0003928;9.44e-21;4!UBERON:0002294;2.66e-12;7!UBERON:0001173;2.66e-12;7!UBERON:0000058;6.80e-09;10!UBERON:0002114;6.34e-08;2!UBERON:0002423;9.02e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.53e-21,1;UBERON:0005056,1.53e-21,1;UBERON:0004913,4.22e-21,1;UBERON:0003703,4.22e-21,1;UBERON:0001174,4.22e-21,1;UBERON:0004914,4.22e-21,1;UBERON:0002394,3.71e-14,6;UBERON:0003928,3.71e-14,6;UBERON:0002294,9.24e-10,9;UBERON:0001173,9.24e-10,9;UBERON:0004912,9.24e-10,9;UBERON:0008835,1.05e-08,22;UBERON:0003894,1.05e-08,22;UBERON:0009854,2.36e-08,23;UBERON:0002114,6.34e-08,2;UBERON:0007499,9.91e-08,25;UBERON:0009497,9.91e-08,25;UBERON:0000015,9.91e-08,25;UBERON:0002423,9.91e-08,25;UBERON:0006235,9.91e-08,25;UBERON:0004161,9.91e-08,25;UBERON:0009856,1.87e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0.130059347559878,0.657751618414705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0.61417158655884,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0.462942225792648,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0.246217006087397,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,0,0,0,0.40101294060657,0.644566922551274,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.384888450902048,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.445773537109913,0.568272293612826,0,0,0,0,0.562677665642051,0,0.659215496907038,0,0,0,0,1.02268682502155,0.246169610922139,0,1.16828856491525,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.455173793141999,0,0,1.37897349296586,0,0.520874984799877,0,0,0,0.331737779793674,0.295547618953547,0,0,0.557694977114413,0,0.113942055847001,0,0.269272933229316,0.217294743844016,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0.421996129056054,0,0,0,0,0,0,1.48260564340311,0.123563938946503,0.417687798021821,0,0,0,0.547364367646998,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,1.42304773014896,0,0,2.05784034570193,0.609414446062818,0,0,0.19351266257817,0.219267951258557,0.410577285266046,0,0,0,0.411125773940253,0.596143835108969,0.126621591911757,0,0.561111741760736,0,0.19980960958213,0,0.114536596165916,0,0.288109595976299,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.196854963029498,0.169346664131569,0.795229689809303,0.272406812223151,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0.242998226632099,0,0,0,0.844802692155252,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.221858103073705,0,0.138348634936231,0,0,0,0.941063278792687,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65882483136342,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0.453411851024545,0,0,0.358177682162975,0,0,0.176689145945881,0.38582807654183,0,0,0,0,0.276516872303462,0,0,0.327130788511688,0,0.245772908753719,0.211312123358627,0,0.320075189082423,0,0,0.736423801007363,0,0,0.255788742607303,0,0,0,0,0,0.123935764259002,0,0,0.23658523500376,0,0,0,0,0,0.638535436228605,0.41023272848151,0.504143392443436,0.0691572524642179,0,0,0.392590874004102,0.235939446695481,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0,0.20170506870352,0,0.261906694481422,0,1.18284868973636,0.0675375846183947,0.781078098613847,0.413373593002368,0.0634158101939068,0,0,0,0,0.383287282918786,0,0.336283722218824,0,0,0,0.115233987555779,1.02892805662451,0,0.263091094251396,0,1.11231401892069,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0.196300467230486,0.243835849964539,0,0,0,0,0.467878926924211,0.596852325484105,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0.471353094203252,0,0,0,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| |||
|short_description=p@chr12:27581768..27581772,+ | |||
}} |
Latest revision as of 07:53, 24 July 2015
Short description: | p@chr12:27581768..27581772, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:27581768..27581772, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.53e-21 | 1 |
external female genitalia | 1.53e-21 | 1 |
hepatopancreatic ampulla | 4.22e-21 | 1 |
extrahepatic bile duct | 4.22e-21 | 1 |
common bile duct | 4.22e-21 | 1 |
duodenal papilla | 4.22e-21 | 1 |
bile duct | 3.71e-14 | 6 |
digestive system duct | 3.71e-14 | 6 |
biliary system | 9.24e-10 | 9 |
biliary tree | 9.24e-10 | 9 |
biliary bud | 9.24e-10 | 9 |
hepatic diverticulum | 1.05e-08 | 22 |
liver primordium | 1.05e-08 | 22 |
digestive tract diverticulum | 2.36e-08 | 23 |
duodenum | 6.34e-08 | 2 |
epithelial sac | 9.91e-08 | 25 |
epithelium of foregut-midgut junction | 9.91e-08 | 25 |
anatomical boundary | 9.91e-08 | 25 |
hepatobiliary system | 9.91e-08 | 25 |
foregut-midgut junction | 9.91e-08 | 25 |
septum transversum | 9.91e-08 | 25 |
sac | 1.87e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 7.72e-21 | 1 |
tubular adenocarcinoma | 3.02e-11 | 2 |