FFCP PHASE1:Hg19::chr12:24191311..24191322,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:24191311..24191322,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:24191311..24191322,- | |||
|id=chr12:24191311..24191322,- | |||
|ontology_enrichment_celltype=CL:0000181!3.05e-49!12;CL:0000417!3.05e-49!12;CL:0000668!3.05e-49!12;CL:0000414!3.05e-49!12;CL:0000412!3.05e-49!12;CL:0000182!3.05e-49!12;CL:0000223!2.29e-17!59;CL:0002231!9.64e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.97e-44;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.97e-44,12;CL:0000223,1.16e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.84e-27;11!UBERON:0009497;2.21e-23;13!UBERON:0001041;1.33e-10;30!UBERON:0003104;4.48e-10;31!CL:0000223;2.28e-07;58 | |||
|ontology_enrichment_disease=DOID:5662!1.70e-17!1;DOID:7!4.29e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:7;1.05e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.54e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!4.03e-42!19;UBERON:0006925!4.03e-42!19;UBERON:0008836!4.03e-42!19;UBERON:0008835!2.34e-36!22;UBERON:0003894!2.34e-36!22;UBERON:0009854!9.04e-35!23;UBERON:0007499!5.65e-32!25;UBERON:0009497!5.65e-32!25;UBERON:0000015!5.65e-32!25;UBERON:0002423!5.65e-32!25;UBERON:0006235!5.65e-32!25;UBERON:0004161!5.65e-32!25;UBERON:0005057!9.75e-31!26;UBERON:0009856!9.75e-31!26;UBERON:0002365!9.58e-26!31;UBERON:0002330!9.58e-26!31;UBERON:0003929!4.72e-24!54;UBERON:0002368!8.95e-23!35;UBERON:0000949!1.19e-17!45;UBERON:0002530!2.24e-17!59;UBERON:0005911!1.24e-15!82;UBERON:0005172!2.22e-14!55;UBERON:0005173!2.22e-14!55;UBERON:0002417!6.26e-13!61;UBERON:0000916!6.26e-13!61;UBERON:0004921!1.35e-09!129;UBERON:0004185!1.35e-09!129;UBERON:0000490!5.40e-09!138;UBERON:0003914!2.14e-08!118;UBERON:0001041!6.91e-08!98;UBERON:0001007!7.29e-08!155;UBERON:0001555!7.29e-08!155;UBERON:0007026!7.29e-08!155;UBERON:0000077!1.45e-07!130;UBERON:0005177!3.50e-07!107;UBERON:0004119!3.79e-07!169;UBERON:0000925!3.79e-07!169;UBERON:0006595!3.79e-07!169;UBERON:0005256!8.16e-07!143;UBERON:0009569!8.94e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.54e-28;19!UBERON:0006925;3.54e-28;19!UBERON:0002423;1.35e-21;25!UBERON:0002365;1.27e-16;31!UBERON:0002330;1.27e-16;31!UBERON:0002368;7.05e-16;33!UBERON:0000949;2.93e-12;43!UBERON:0002530;1.54e-08;57!UBERON:0002417;2.87e-07;58!UBERON:0000916;2.87e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.54e-28,19;UBERON:0006925,3.54e-28,19;UBERON:0008836,3.54e-28,19;UBERON:0008835,1.93e-24,22;UBERON:0003894,1.93e-24,22;UBERON:0009854,2.07e-23,23;UBERON:0007499,1.35e-21,25;UBERON:0009497,1.35e-21,25;UBERON:0000015,1.35e-21,25;UBERON:0002423,1.35e-21,25;UBERON:0006235,1.35e-21,25;UBERON:0004161,1.35e-21,25;UBERON:0009856,8.56e-21,26;UBERON:0002365,1.49e-17,31;UBERON:0002330,1.49e-17,31;UBERON:0002368,1.27e-15,35;UBERON:0000949,2.74e-12,45;UBERON:0003929,2.46e-10,54;UBERON:0005172,2.46e-10,54;UBERON:0005173,2.46e-10,54;UBERON:0002530,1.66e-09,59;UBERON:0002417,2.35e-09,60;UBERON:0000916,2.35e-09,60;UBERON:0005911,5.63e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.564214628977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62402638613229,3.70871362715249,3.43758073656343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:24191311..24191322,- | |||
}} |
Latest revision as of 07:38, 24 July 2015
Short description: | p@chr12:24191311..24191322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24191311..24191322, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.97e-44 | 12 |
endodermal cell | 1.16e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.54e-28 | 19 |
digestive gland | 3.54e-28 | 19 |
liver bud | 3.54e-28 | 19 |
hepatic diverticulum | 1.93e-24 | 22 |
liver primordium | 1.93e-24 | 22 |
digestive tract diverticulum | 2.07e-23 | 23 |
epithelial sac | 1.35e-21 | 25 |
epithelium of foregut-midgut junction | 1.35e-21 | 25 |
anatomical boundary | 1.35e-21 | 25 |
hepatobiliary system | 1.35e-21 | 25 |
foregut-midgut junction | 1.35e-21 | 25 |
septum transversum | 1.35e-21 | 25 |
sac | 8.56e-21 | 26 |
exocrine gland | 1.49e-17 | 31 |
exocrine system | 1.49e-17 | 31 |
endocrine gland | 1.27e-15 | 35 |
endocrine system | 2.74e-12 | 45 |
gut epithelium | 2.46e-10 | 54 |
abdomen element | 2.46e-10 | 54 |
abdominal segment element | 2.46e-10 | 54 |
gland | 1.66e-09 | 59 |
abdominal segment of trunk | 2.35e-09 | 60 |
abdomen | 2.35e-09 | 60 |
endo-epithelium | 5.63e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.54e-08 | 39 |