FFCP PHASE1:Hg19::chr12:13065686..13065702,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:13065686..13065702,+ | |||
|coexpression_cluster_id=C814 | |||
|description=CAGE_peak_at_chr12:13065686..13065702,+ | |||
|id=chr12:13065686..13065702,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.76e-28!254;CL:0000077!1.42e-10!19;CL:0000220!4.38e-09!246;CL:0002321!1.07e-08!248;CL:0000076!3.68e-08!62;CL:0000222!9.06e-08!119;CL:0000548!6.32e-07!679;CL:0000004!6.32e-07!679;CL:0000255!6.32e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.06e-14;19!CL:1000507;1.05e-07;10!CL:1000494;1.05e-07;10!CL:1000497;1.30e-07;17!CL:0002518;1.30e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.06e-29,253;CL:0000077,5.14e-14,19;CL:0000076,1.09e-08,63;CL:1000507,6.13e-08,10;CL:1000494,6.13e-08,10;CL:1000497,9.61e-08,17;CL:0002518,9.61e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.47e-14;29 | |||
|ontology_enrichment_disease=DOID:305!1.61e-21!106;DOID:0050687!8.29e-17!143;DOID:14566!2.12e-08!239;DOID:299!2.95e-08!25;DOID:1749!1.07e-07!14;DOID:162!1.60e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.86e-08;14!DOID:299;1.90e-07;25!DOID:305;7.91e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.69e-24,106;DOID:0050687,8.20e-19,143;DOID:14566,7.10e-12,239;DOID:162,5.15e-11,235;DOID:1749,2.64e-08,14;DOID:299,3.17e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.73e-14!238;UBERON:0009142!1.73e-14!238;UBERON:0004119!1.95e-14!169;UBERON:0000925!1.95e-14!169;UBERON:0006595!1.95e-14!169;UBERON:0001007!1.98e-12!155;UBERON:0001555!1.98e-12!155;UBERON:0007026!1.98e-12!155;UBERON:0004921!5.91e-12!129;UBERON:0004185!5.91e-12!129;UBERON:0002100!8.55e-12!216;UBERON:0000077!3.80e-10!130;UBERON:0003064!6.21e-10!37;UBERON:0001008!8.91e-10!45;UBERON:0006554!1.64e-09!44;UBERON:0000481!2.20e-09!347;UBERON:0008947!2.43e-09!38;UBERON:0003258!2.43e-09!38;UBERON:0000464!3.68e-09!104;UBERON:0000065!4.07e-09!53;UBERON:0000466!3.69e-08!126;UBERON:0005153!4.60e-08!37;UBERON:0000490!4.76e-08!138;UBERON:0005911!5.98e-08!82;UBERON:0001048!7.67e-08!168;UBERON:0005177!9.53e-08!107;UBERON:0004122!1.34e-07!15;UBERON:0001737!1.50e-07!9;UBERON:0009569!1.60e-07!113;UBERON:0005156!2.61e-07!59;UBERON:0000990!2.61e-07!59;UBERON:0000162!2.71e-07!14;UBERON:0001353!2.71e-07!14;UBERON:0000163!2.71e-07!14;UBERON:0006866!2.71e-07!14;UBERON:0000164!2.71e-07!14;UBERON:0000931!2.71e-07!14;UBERON:0005256!4.40e-07!143;UBERON:0000926!4.45e-07!448;UBERON:0004120!4.45e-07!448;UBERON:0006603!4.45e-07!448;UBERON:0000072!5.64e-07!46;UBERON:0000915!7.56e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-10;9!UBERON:0001557;2.90e-10;9!UBERON:0000065;2.33e-09;44!UBERON:0000072;5.46e-08;37!UBERON:0002367;8.40e-08;11!UBERON:0010147;8.40e-08;11!UBERON:0004211;1.05e-07;10!UBERON:0009773;1.05e-07;10!UBERON:0001231;1.05e-07;10!UBERON:0004810;1.05e-07;10!UBERON:0003937;6.42e-07;12!UBERON:0005399;6.42e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.00e-12,118;UBERON:0004119,3.24e-12,160;UBERON:0000925,3.24e-12,160;UBERON:0006595,3.24e-12,160;UBERON:0008947,3.60e-12,38;UBERON:0003258,3.60e-12,38;UBERON:0000065,4.91e-11,54;UBERON:0001737,2.57e-10,9;UBERON:0001007,3.15e-10,145;UBERON:0001555,3.15e-10,145;UBERON:0007026,3.15e-10,145;UBERON:0001008,3.47e-10,48;UBERON:0002100,6.89e-10,199;UBERON:0006554,7.89e-10,47;UBERON:0005911,8.43e-10,82;UBERON:0005153,8.58e-10,37;UBERON:0004122,1.64e-09,15;UBERON:0000162,4.64e-09,14;UBERON:0001353,4.64e-09,14;UBERON:0000163,4.64e-09,14;UBERON:0006866,4.64e-09,14;UBERON:0000164,4.64e-09,14;UBERON:0000931,4.64e-09,14;UBERON:0000072,1.08e-08,47;UBERON:0005157,4.42e-08,47;UBERON:0001046,5.23e-08,19;UBERON:0004810,6.13e-08,10;UBERON:0002367,1.04e-07,11;UBERON:0010147,1.04e-07,11;UBERON:0009846,1.04e-07,11;UBERON:0003353,1.04e-07,11;UBERON:0004902,1.04e-07,11;UBERON:0003820,1.04e-07,11;UBERON:0009847,1.04e-07,11;UBERON:0005177,1.11e-07,101;UBERON:0003064,1.20e-07,28;UBERON:0000915,6.71e-07,52;UBERON:0003937,7.78e-07,12;UBERON:0005399,7.78e-07,12 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0,0,19.1672470471177,40.4724677424008,0.655324116390517,1.31883489114227,1.23766352960047,2.31978163009541,0.672325146451775,0,0,0.487932798790507,0.369363174230364,1.22400414746552,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0,0,1.29096936716765,0,0,0.272906150057846,0.449446968890169,0.918251677112708,0.320929027076094,0,0,0,0,0,0,0,0.75374599577023,0,0,1.21079900526674,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,3.70801429346238,7.22878304769133,0,3.18662341713812,0,0,0.472674085820339,2.66075276955077,0.527008714158756,1.5062593682237,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,1.67799774483962,2.75118041940067,0.208994966536811,0,0,0,0,0,0,1.47065232138347,0.81014194788176,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,1.3082821564276,0.993943903390637,0.886413581652058,1.05927344650575,0,0,1.12135520028461,0,0.98667019366864,0.311211035399766,0.538842688278752,0.490385709340376,1.05950199351452,1.15235184896,0,0,0,0,0,0,0,0.61246251376468,0.491337269247072,0,0,0.247266929278557,2.73048408581408,0.718618141816238,0.168336113954066,0,0.554128230968366,0,0,0.150238058906597,1.24775401476023,4.12596162084383,0.213557388818567,0.423863802319124,2.10063767259082,0.824420233907511,2.06112432036503,0.37223371266318,0.168776332241266,0.194874010322397,1.26216887122057,0.184099797284599,1.61646056818812,1.77504796258307,0.906768884048762,1.18692414617341,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,8.04486240270938,4.55178663210875,5.54325368732009,13.7867465915492,6.972142210957,9.72809538355496,10.7865046528132,6.67152981426177,7.69494313892781,0,0,0,4.41026134156626,0,0,0,0,5.90344505006945,9.95093299731448,0.329250856225877,0,0,0.0925884451585296,0,0,14.4331342025273,0.115930404975077,3.63966952131047,0.144366447761074,0,0.190254152234598,2.37061319387782,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0,0,0.288239906833923,0,0.380987365753014,0,1.17217447210047,0,0.514137463516618,1.8020583470635,0.285826432630578,2.91540819297938,4.3596006883328,0.51336800074665,0.258543431515556,0,0.845302752556,0.797814349754612,4.16029747645464,0.514414748524284,1.41849132023278,0,1.14382394926518,0.542621605391443,0,0,0.710783897485092,3.95975936466715,6.63166629531089,3.48613383440118,6.29829844446959,0,0,0,0.239624855491583,0,0,0.434343920002738,1.64381058040307,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.47229790062968,1.00034104211935,0.271265023699736,0.831883446123229,1.42743191037729,0.946214490203608,0.468565659970853,0,0,0,0,0,0.521301686808497,0.783204629850962,0.343143423810856,0,0,0,3.94065842880137,0,0,0.248107807818777,0.153461973288062,0,0.512556597022804,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.232420756919918,5.19695633243976,11.4288688072872,2.3941057123333,4.13332013392584,3.45973219212762,2.36023946926963,19.8527829679261,14.863960061152,1.56869953835371,2.92278449306521,3.79985864014353,0,1.02056223165909,0.647747748306418,0,2.98041081298238,0.501689773854853,8.92066955657634,13.2972161428596,4.47749509444357,0,0,4.35965212697862,9.51242472529147,0.325378394664303,2.7821073144885,0,0,0,1.30012049207304,1.6068392984416,0,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0.267096106940212,1.65284915360978,0.960950336825531,2.16941611240793,1.2138933702666,0,1.25924938732256,1.3940745403212,0.308033580176089,0,1.73986598415015,0.74129687641568,0.572499546967965,1.116475108079,2.53103539774981,0.38126038784765,1.535386747868,0,0.318203247925937,1.56989728039846,1.61885211824983,1.37268514868027,0.471249609382746,0.808729926293264,7.92551605865041,0.421258456238981,2.92580243453754,5.60541026151954,6.33900880540533,3.27599787379166,2.54529777516683,1.13008116620243,0.551365343546124,5.97095077717098,5.69986150829892,0.578775534266688,0,1.21746226177622,0.30982349809975,0.845086807596724,0.286822704408103,2.16147890228867,0,1.06428319221179,0.633322905892992,2.63435914367922,0,0,0.865999014529609,1.34060455107157,0,2.91845782408015,2.15252686335615,0,3.10401107475673,1.83778720165568,0,0,0,0,0,0,0,0,0.427296284509893,0,6.37104561550682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.293016358543788,0,0,1.13654458722565,7.1623345421307,3.26661148915902,7.98617825458003,0,0,0.111308705022906,0,0.844501632511974,0.398495976502139,0,0,1.32949287252801,0,0,14.1991994812776,4.47552936689023,0,1.479651084554,0,0,0,0.0927680981618513,0,2.08342208868187,0.0874599999961957,1.44999915086959,1.70690172428249,6.86484855790469,1.18193840883968,0,0,0,0,0,0,0,0,0,0.871507708151921,3.48559360696508,0.538651809526579,0.797594390929008,0.23056390438806,0.179515288819544,1.62971057883012,11.1650405906172,1.74035427463538,14.3919389525031,0,0,0,0,0,0,0,0,1.05499032264014,3.7543545876604,1.27217764290547,0,0,0.796118080530053,7.33236173920351,0,0,0,0,0,0,0,4.10895699757388,4.12726645207958,0,0,0,0.063186579628488,0.150323419414493,0.414752765588989,5.31723098165748,2.64793564700399,0.941798755221676,1.19472429772959,1.13843818411917,0,0.867798691675654,3.72371110174635,9.40239431068348,0.52418000472609,0,6.19240520250145,3.94682312265402,7.1440447636292,0.678923115418936,0,0.451961481561065,1.37041924646751,0.596143835108969,0,5.86654148204409,0.721429382263803,1.28071796843612,0.39961921916426,5.04316460039371,0,0,3.88947954568004,0.621262677827163,2.12124631155116,0.543616824294456,0.836822770498666,0.815985741090574,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,2.15361907373044,1.39775300349294,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.492137407573744,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.314727528809989,1.90080605734932,1.6135860539956,5.37362552494447,0,0,0,2.71499800876856,7.77799342081141,4.57222304153173,1.19730191562487,0,0,1.24643300672138,0,0,0.129282956361551,0.13223260174269,1.53978154095896,6.34333520085005,8.86335524311866,3.77290332239198,1.24271716604159,0,0,0,1.91502377331055,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0.151649117541648,0,9.41063278792687,0,0,0.74627401443437,0,0,0.189403005275089,0.754703705257725,2.66943366478961,0.457680136793847,0,0.466311601748341,0.295710299979268,0.318593534327405,0,0.465788870628778,0.829412415681711,0.265841714557995,0,1.6528336989694,10.6625459407263,1.22061219961398,0,1.50374779859484,0,3.18476710958893,0.400027764663154,0,0.336749488765919,0,12.1350493156601,2.57329909649911,3.39292579554775,5.44094221229454,11.113078767544,4.16052397660995,5.01448755028165,26.8657259030046,7.45565768567604,11.1314161945905,16.2047792147568,4.39250345697989,0,0.690860683462397,8.20421881678932,0,0,0,0,0,5.16123108382811,6.12805157740018,0,0,0,3.97261167496785,0.368211900503681,1.81843360035278,0.622077260032973,0.383683113910955,0,0,0,0,0,0.123935764259002,0,1.90802610392051,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0.88332946650923,1.88751557356385,2.38457178078183,7.16259130132097,0,0,0,0.451261970095544,0.40341013740704,0,0,12.2828938132573,5.61853127624772,0,0,0,0.0634158101939068,0,0,0,0,1.78867398695433,0,0,0,0,0.266107110487916,0.115233987555779,0.171488009437418,0,0,4.96414131712666,2.22462803784138,0.470958557103084,0,8.96870922604125,0.913158720509496,1.51149313853035,2.8665101273223,0.214429632529969,0,1.27865567904938,0.173858272302579,2.40513409419076,0.207216164163037,0,0,0,0.354996002191696,0.255640214277473,0,8.2478472675858,0.93061915699296,0.955538938977433,1.34226518157351,8.4409200909109,5.60822454918439,0,0.102662806856247,0,0,0,0,0.475680363110274,0,0,0,1.15761237161917,0.655678681511872,0,0,0,0,0.297046400327086,0,0.509781344063451,0,0.128915775947154,0,3.03541695629618,6.35210769088245,2.88868920081006,0,0.458729283404541,0,0,0,0,0,0.371995018166751,2.31087814315709,0.865253124247578,0,0,0,1.01988829741982,3.20660886318673,4.22716537860287,1.50424523575425,0.0757786982182394,0,0,0,0.852935927603924,0.476128862927481,0,0,0.224263725161227,2.41859201457027,0.808468755832877,0.653150243690884,0,0.202056159043763,1.72133292942423,1.33064142618405,2.19788825249631,5.33636729388577,3.8614456457388,1.61685363791856,0,0.122241444182866,0,1.33151354837103,0.201273793591026,0 | |||
|short_description=p@chr12:13065686..13065702,+ | |||
}} |
Latest revision as of 06:44, 24 July 2015
Short description: | p@chr12:13065686..13065702, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13065686..13065702, + |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.06e-29 | 253 |
mesothelial cell | 5.14e-14 | 19 |
squamous epithelial cell | 1.09e-08 | 63 |
kidney tubule cell | 6.13e-08 | 10 |
nephron tubule epithelial cell | 6.13e-08 | 10 |
kidney cell | 9.61e-08 | 17 |
kidney epithelial cell | 9.61e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.69e-24 | 106 |
cell type cancer | 8.20e-19 | 143 |
disease of cellular proliferation | 7.10e-12 | 239 |
cancer | 5.15e-11 | 235 |
squamous cell carcinoma | 2.64e-08 | 14 |
adenocarcinoma | 3.17e-07 | 25 |