FFCP PHASE1:Hg19::chr12:128108552..128108561,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-136bp_to_ENST00000537470_5end | |||
|cluster_id=chr12:128108552..128108561,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_1_at_ENST00000537470_5end | |||
|id=chr12:128108552..128108561,+ | |||
|ontology_enrichment_celltype=CL:0000167!7.03e-13!1;CL:0000164!7.03e-13!1;CL:0000502!7.03e-13!1;CL:0000172!7.03e-13!1;CL:0000173!7.03e-13!1;CL:0002351!7.03e-13!1;CL:1000415!6.07e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.23e-66;1!CL:0000164;1.23e-66;1!CL:0000502;1.23e-66;1!CL:0000172;1.23e-66;1!CL:0000173;1.23e-66;1!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.23e-66,1;CL:0000164,1.23e-66,1;CL:0000502,1.23e-66,1;CL:0000172,1.23e-66,1;CL:0000173,1.23e-66,1;CL:0002351,1.23e-66,1;CL:0000150,1.04e-08,9;CL:0000163,1.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002351;1.23e-66;1!UBERON:0005754;2.39e-66;1!UBERON:0007297;5.04e-34;2!UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease=DOID:4430!7.03e-13!1;DOID:5662!1.96e-12!1;DOID:4074!5.41e-07!2;DOID:4905!5.41e-07!2;DOID:3498!5.41e-07!2;DOID:3493!7.20e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.23e-66;1!DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.23e-66,1;DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0006947!3.18e-16!3;UBERON:0004054!3.18e-16!3;UBERON:0000998!7.89e-13!1;UBERON:0006868!7.89e-13!1;UBERON:0001000!8.85e-13!1;UBERON:0005352!8.85e-13!1;UBERON:0005904!2.08e-12!4;UBERON:0002336!4.81e-12!1;UBERON:0001018!4.81e-12!1;UBERON:0002473!4.81e-12!1;UBERON:0005340!4.81e-12!1;UBERON:0002316!4.81e-12!1;UBERON:0003544!4.81e-12!1;UBERON:0001020!4.81e-12!1;UBERON:0005970!4.81e-12!1;UBERON:0002437!4.81e-12!1;UBERON:0005172!6.53e-07!55;UBERON:0005173!6.53e-07!55;UBERON:0002113!8.07e-07!27;UBERON:0003918!8.07e-07!27;UBERON:0005095!8.07e-07!27;UBERON:0007687!8.07e-07!27;UBERON:0002148!8.52e-07!2;UBERON:0009662!8.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.52e-87;3!UBERON:0004054;1.52e-87;3!UBERON:0000998;2.39e-66;1!UBERON:0006868;2.39e-66;1!UBERON:0001000;4.66e-66;1!UBERON:0005352;4.66e-66;1!UBERON:0005904;4.67e-66;4!UBERON:0000058;2.72e-27;10!UBERON:0003135;6.20e-25;11!UBERON:0004175;1.16e-13;21!UBERON:0003101;4.26e-13;22!UBERON:0000079;4.26e-13;22!UBERON:0000473;1.35e-09;8!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.52e-87,3;UBERON:0004054,1.52e-87,3;UBERON:0000998,2.39e-66,1;UBERON:0006868,2.39e-66,1;UBERON:0001000,4.66e-66,1;UBERON:0005352,4.66e-66,1;UBERON:0005904,4.67e-66,4;UBERON:0003135,6.20e-25,11;UBERON:0000058,5.66e-15,19;UBERON:0003101,4.26e-13,22;UBERON:0000079,4.26e-13,22;UBERON:0004175,1.15e-11,25;UBERON:0000473,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0004876,2.47e-07,11;UBERON:0003937,7.92e-07,12;UBERON:0005399,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,10.1612892045823,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3762693731992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000537470 | |||
}} |
Latest revision as of 06:37, 24 July 2015
Short description: | p1@ENST00000537470 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000537470_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | -136bp_to_ENST00000537470_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.23e-66 | 1 |
enteroendocrine cell | 1.23e-66 | 1 |
type D enteroendocrine cell | 1.23e-66 | 1 |
somatostatin secreting cell | 1.23e-66 | 1 |
pancreatic D cell | 1.23e-66 | 1 |
progenitor cell of endocrine pancreas | 1.23e-66 | 1 |
glandular epithelial cell | 1.04e-08 | 9 |
endocrine cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.52e-87 | 3 |
internal male genitalia | 1.52e-87 | 3 |
seminal vesicle | 2.39e-66 | 1 |
seminal fluid secreting gland | 2.39e-66 | 1 |
vas deferens | 4.66e-66 | 1 |
spermatic cord | 4.66e-66 | 1 |
duct of male reproductive system | 4.67e-66 | 4 |
male reproductive organ | 6.20e-25 | 11 |
duct | 5.66e-15 | 19 |
male organism | 4.26e-13 | 22 |
male reproductive system | 4.26e-13 | 22 |
internal genitalia | 1.15e-11 | 25 |
testis | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
urogenital ridge | 2.47e-07 | 11 |
sex gland | 7.92e-07 | 12 |
male reproductive gland | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.23e-66 | 1 |
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |