FFCP PHASE1:Hg19::chr12:119419442..119419453,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84530 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29389 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=46bp_to_uc001txa.1_5end | |||
|cluster_id=chr12:119419442..119419453,+ | |||
|description=CAGE_peak_3_at_SRRM4_5end | |||
|id=chr12:119419442..119419453,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.36e-15;82!UBERON:0006215;5.02e-13;3 | |||
|ontology_enrichment_disease=DOID:171!2.57e-10!10;DOID:169!2.67e-09!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.08e-80!94;UBERON:0001016!3.08e-80!94;UBERON:0001017!8.91e-79!82;UBERON:0001049!1.08e-78!57;UBERON:0005068!1.08e-78!57;UBERON:0006241!1.08e-78!57;UBERON:0007135!1.08e-78!57;UBERON:0005743!9.62e-78!86;UBERON:0000955!7.38e-72!69;UBERON:0006238!7.38e-72!69;UBERON:0002616!6.98e-69!59;UBERON:0002780!1.03e-62!41;UBERON:0001890!1.03e-62!41;UBERON:0006240!1.03e-62!41;UBERON:0003080!5.16e-61!42;UBERON:0002346!3.90e-60!90;UBERON:0003075!3.06e-58!86;UBERON:0007284!3.06e-58!86;UBERON:0001893!5.53e-48!34;UBERON:0002020!5.98e-48!34;UBERON:0003528!5.98e-48!34;UBERON:0001869!1.02e-47!32;UBERON:0002791!1.27e-45!33;UBERON:0003056!1.68e-44!61;UBERON:0007023!2.91e-44!115;UBERON:0000924!2.28e-43!173;UBERON:0006601!2.28e-43!173;UBERON:0001950!1.35e-42!20;UBERON:0002619!1.60e-42!22;UBERON:0004121!2.06e-41!169;UBERON:0000033!1.04e-38!123;UBERON:0000153!6.37e-38!129;UBERON:0007811!6.37e-38!129;UBERON:0000956!6.63e-37!25;UBERON:0000203!6.63e-37!25;UBERON:0003076!5.73e-18!15;UBERON:0003057!5.73e-18!15;UBERON:0000025!1.70e-17!194;UBERON:0000200!1.92e-16!6;UBERON:0001894!2.68e-16!7;UBERON:0006222!2.68e-16!7;UBERON:0004733!8.96e-16!12;UBERON:0002028!8.96e-16!12;UBERON:0007277!8.96e-16!12;UBERON:0004732!2.06e-14!13;UBERON:0002021!5.20e-14!5;UBERON:0001872!7.87e-14!5;UBERON:0004111!3.68e-13!241;UBERON:0002308!2.61e-12!9;UBERON:0000125!2.61e-12!9;UBERON:0001871!9.44e-12!7;UBERON:0000483!2.97e-11!309;UBERON:0000119!5.14e-11!312;UBERON:0003296!1.59e-10!4;UBERON:0010133!1.59e-10!4;UBERON:0000477!1.87e-10!286;UBERON:0002298!1.97e-10!8;UBERON:0000475!2.00e-10!365;UBERON:0002680!3.21e-10!9;UBERON:0001895!3.21e-10!9;UBERON:0010092!3.21e-10!9;UBERON:0000064!3.47e-10!219;UBERON:0002771!3.17e-09!3;UBERON:0002420!4.19e-09!9;UBERON:0007245!4.19e-09!9;UBERON:0010009!4.19e-09!9;UBERON:0010011!4.19e-09!9;UBERON:0000454!4.19e-09!9;UBERON:0009663!2.32e-08!7;UBERON:0000988!3.35e-08!3;UBERON:0001896!1.24e-07!3;UBERON:0005290!1.24e-07!3;UBERON:0010096!1.24e-07!3;UBERON:0000013!1.53e-07!5;UBERON:0002410!1.53e-07!5;UBERON:0000922!4.38e-07!612;UBERON:0001905!7.32e-07!2;UBERON:0002757!7.32e-07!2;UBERON:0010134!7.32e-07!2;UBERON:0002784!7.32e-07!2;UBERON:0005408!7.32e-07!2;UBERON:0001899!7.32e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.60e-63;22!UBERON:0001950;4.57e-63;20!UBERON:0000956;2.82e-55;25!UBERON:0000203;2.82e-55;25!UBERON:0001869;2.48e-54;32!UBERON:0003528;1.69e-53;34!UBERON:0002020;1.69e-53;34!UBERON:0002791;4.61e-50;32!UBERON:0001893;2.56e-49;34!UBERON:0002780;1.10e-40;41!UBERON:0001890;1.10e-40;41!UBERON:0000073;1.61e-39;53!UBERON:0002616;1.61e-39;53!UBERON:0000955;1.07e-31;68!UBERON:0001017;4.07e-29;75!UBERON:0001016;1.06e-24;83!UBERON:0000200;1.44e-23;6!UBERON:0002021;6.13e-20;5!UBERON:0001872;6.37e-20;5!UBERON:0002680;5.65e-15;9!UBERON:0001895;5.65e-15;9!UBERON:0004733;1.06e-14;12!UBERON:0002028;1.06e-14;12!UBERON:0001871;1.66e-13;6!UBERON:0004732;1.71e-13;13!UBERON:0001870;1.50e-12;3!UBERON:0000988;1.57e-11;3!UBERON:0011216;5.63e-11;132!UBERON:0007023;1.76e-10;114!UBERON:0000125;7.61e-10;9!UBERON:0002308;7.61e-10;9!UBERON:0002298;8.05e-10;6!UBERON:0002784;1.49e-09;4!UBERON:0001905;1.78e-09;2!UBERON:0002757;1.78e-09;2!UBERON:0010134;1.78e-09;2!UBERON:0005408;1.78e-09;2!UBERON:0001899;1.78e-09;2!UBERON:0002771;3.80e-09;2!UBERON:0002702;4.19e-09;2!UBERON:0002148;3.50e-08;2!UBERON:0006331;3.50e-08;2!UBERON:0009662;3.50e-08;2!UBERON:0000349;4.83e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.04e-75,53;UBERON:0002616,6.04e-75,53;UBERON:0000955,7.25e-71,68;UBERON:0006238,7.25e-71,68;UBERON:0001049,1.48e-70,56;UBERON:0005068,1.48e-70,56;UBERON:0006241,1.48e-70,56;UBERON:0007135,1.48e-70,56;UBERON:0001017,1.03e-68,81;UBERON:0001016,1.61e-67,89;UBERON:0002619,1.69e-63,22;UBERON:0001950,2.07e-63,20;UBERON:0003528,1.26e-62,34;UBERON:0002020,1.26e-62,34;UBERON:0001869,6.87e-62,32;UBERON:0002780,5.51e-61,41;UBERON:0001890,5.51e-61,41;UBERON:0003080,5.51e-61,41;UBERON:0006240,5.51e-61,41;UBERON:0001893,5.41e-58,34;UBERON:0002791,1.78e-56,32;UBERON:0000956,1.45e-55,25;UBERON:0000203,1.45e-55,25;UBERON:0002346,4.71e-49,86;UBERON:0003075,6.82e-49,82;UBERON:0007284,6.82e-49,82;UBERON:0003056,2.62e-42,61;UBERON:0010371,7.67e-37,104;UBERON:0004121,1.06e-34,171;UBERON:0000924,1.06e-34,171;UBERON:0006601,1.06e-34,171;UBERON:0007023,3.94e-33,114;UBERON:0010314,3.53e-29,132;UBERON:0011216,1.19e-28,223;UBERON:0000200,9.09e-24,6;UBERON:0002021,3.93e-20,5;UBERON:0001872,7.32e-20,5;UBERON:0000025,2.64e-17,192;UBERON:0002680,5.95e-15,9;UBERON:0001895,5.95e-15,9;UBERON:0010092,5.95e-15,9;UBERON:0004733,1.25e-14,12;UBERON:0002028,1.25e-14,12;UBERON:0007277,1.25e-14,12;UBERON:0001871,1.06e-13,6;UBERON:0004732,2.00e-13,13;UBERON:0001870,1.45e-12,3;UBERON:0004111,3.63e-12,240;UBERON:0003076,1.68e-11,15;UBERON:0003057,1.68e-11,15;UBERON:0000988,1.82e-11,3;UBERON:0000125,9.35e-10,9;UBERON:0002308,9.35e-10,9;UBERON:0002298,1.02e-09,6;UBERON:0002784,1.33e-09,4;UBERON:0001905,1.78e-09,2;UBERON:0002757,1.78e-09,2;UBERON:0010134,1.78e-09,2;UBERON:0005408,1.78e-09,2;UBERON:0001899,1.78e-09,2;UBERON:0002771,3.24e-09,2;UBERON:0002702,4.11e-09,2;UBERON:0000483,1.65e-08,306;UBERON:0000119,2.40e-08,309;UBERON:0002148,3.92e-08,2;UBERON:0006331,3.92e-08,2;UBERON:0009662,3.92e-08,2;UBERON:0000349,4.21e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,1.54657762555539,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96937182974718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,4.17456441728331,1.99613798001194,0,0,0,0,0,0,0,1.16641845353302,0.868124974666461,0,0.723578631752448,4.5774520895125,21.5629556865888,12.7085476150025,3.29078095730959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,0,1.83643656978294,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03382666702479,0,0,3.48209377757333,0,0,0,0,0,0,3.43189995723929,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49823746722733,0,0,0,0,0.77380195455795,4.31321852271975,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,4.6369980662746,5.38321002037949,0.573409195690071,1.10929051536852,0.993542447062135,1.38348634936231,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22162962682788,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.107824811396682,0.314531883711793,1.63814457288021,0,1.06287460050841,0,0,0,0,2.40171224485641,0,0,3.46837815520881,5.6678630530234,4.62938191265739,4.1023272848151,4.78936222821264,4.97932217742369,4.03689114079628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72763092328763,5.46754669029693,5.37385670903079,4.18544347279785,4.37579847214576,0,0,0.703484977438482,0,27.3207936297926,23.2035768330989,0.606965604236632,0.227662191351298,0,0,0,2.37894065418911,3.8805936402081,0,0,0.078493092850514,1.25692471932802,0,2.73947616152849,0,0,4.36006919477604,0.94808167039636,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0.989464650708862,1.50962843566674,0,0,2.82190377816914,0,0.235676547101626,0.785233868459781,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,4.41944686240946,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SRRM4 | |||
}} |
Latest revision as of 18:21, 16 September 2015
Short description: | p3@SRRM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRRM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_uc001txa.1_5end |
EntrezGene: | SRRM4 |
HGNC: | 29389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data