FFCP PHASE1:Hg19::chr12:10516557..10516570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=189bp_to_ENST00000500682,uc001qya.1_5end | |||
|cluster_id=chr12:10516557..10516570,+ | |||
|description=CAGE_peak_2_at_ENST00000500682_5end,CAGE_peak_2_at_uc001qya.1_5end | |||
|id=chr12:10516557..10516570,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.29e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.46e-16;13!CL:0002076;1.42e-09;42!CL:0002328;3.51e-09;3!CL:0000319;1.03e-07;1!CL:0000222;2.65e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.64e-16,13;CL:0002076,5.81e-13,42;CL:0000223,7.55e-11,58;CL:0002328,3.98e-09,3;CL:0000319,1.18e-07,1;CL:0000066,2.79e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.65e-07;1!UBERON:0005754;2.65e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!8.35e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.10e-10;14!DOID:3030;1.03e-07;1!DOID:3371;2.65e-07;1!DOID:4549;2.65e-07;1!DOID:5861;2.65e-07;1!DOID:6496;2.65e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.28e-11,14;DOID:3030,1.18e-07,1;DOID:3371,4.61e-07,1;DOID:4549,4.61e-07,1;DOID:5861,4.61e-07,1;DOID:6496,4.61e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.34e-09!365;UBERON:0000481!1.29e-08!347;UBERON:0004119!1.30e-08!169;UBERON:0000925!1.30e-08!169;UBERON:0006595!1.30e-08!169;UBERON:0000033!5.10e-08!123;UBERON:0006554!6.89e-08!44;UBERON:0001008!1.63e-07!45;UBERON:0000153!2.84e-07!129;UBERON:0007811!2.84e-07!129;UBERON:0000161!6.71e-07!35;UBERON:0002780!8.91e-07!41;UBERON:0001890!8.91e-07!41;UBERON:0006240!8.91e-07!41;UBERON:0004121!9.14e-07!169;UBERON:0004111!9.51e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.51e-09;3!UBERON:0002031;3.51e-09;3!UBERON:0001831;2.65e-07;1!UBERON:0000998;2.65e-07;1!UBERON:0006868;2.65e-07;1!UBERON:0001567;2.65e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.98e-09,3;UBERON:0002031,3.98e-09,3;UBERON:0000998,2.83e-07,1;UBERON:0006868,2.83e-07,1;UBERON:0001831,4.34e-07,1;UBERON:0001567,4.34e-07,1;UBERON:0008801,4.34e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.873765488520689,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,2.75826367343678,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.130979075497713,0,1.48313777113772,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0.438977620880838,0.30648779579902,0.45071417671979,0.340296549480063,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,1.84780341018745,0.850650583454319,0.179117045405697,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,0.61642896765115,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0.542530047399471,0.415941723061614,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,6.81721999031168,0,0.114814448164607,0,0.262248829918848,0.451199612907412,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.206082023295445,0.27470839445503,0.330037999682352,0.574265537996172,2.60024098414608,0,0,0.462145851343933,0,0,0.322260734604821,0.290033387828457,0.0852266274161009,0,1.15699440752685,2.69066094311149,2.80747967488085,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.823611089208164,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0.196498082026242,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0.962221127255121,1.34060455107157,0,0.0941438007767792,0.86101074534246,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,3.43056302373444,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,1.9882952955326,0.844016498463076,0.222617410045812,0,1.90012867315194,0,0,0,0.715880777515084,0,0,0.808815160325942,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0.910347586283997,0.508507300585533,0.236387681767936,0,0,0,0.885741385813839,0,0,0,0,0,0,2.09135616417905,0.384751292518985,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0.296521128680622,0,0.208843899010911,0.539209063845416,0,0.234264445725339,0,1.9566461893209,0,0,1.20990716048664,0,0,0.60129367765797,2.07376382794494,0,0.330991955875499,0,0,0,0,0,0.391969589657511,0.783532859223623,0.34945333648406,0.343972064943233,0.0967563312890851,0.146178634172371,0.164230914106418,0.387956065953678,1.059073520298,0.677942222341597,0,0.397429223405979,0.316553979779393,0.782205530939212,0,0.426905989478705,1.79828648623917,0.288180834308212,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0.684526894459965,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0.393709926058995,0,0,0.408610218334727,0,0,0.415440338029185,0,0,0.121499113316049,0,0,0.157363764404994,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0.129282956361551,0.39669780522807,0,0.704815022316672,0.106787412567695,0.314408610199332,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0.471162288750703,0.886068179966986,0.122026264901963,0.1251909307065,0,0.221858103073705,0,0,0.74988244777264,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.151230923763239,0,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0.545545977607678,0.107410557042488,0,0.398095888698616,0,0.686791410365586,0,1.26184898228651,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0.607719912354764,0.553033744606923,0,0,0,0.655219697692825,2.21195617878347,0.211312123358627,0.19998739585493,0,0,0,0,0.279759015438889,1.244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| |||
|short_description=p2@ENST00000500682,p2@uc001qya.1 | |||
}} |
Latest revision as of 04:21, 24 July 2015
Short description: | p2@ENST00000500682, p2@uc001qya.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000500682_5end, CAGE_peak_2_at_uc001qya.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 189bp_to_ENST00000500682, uc001qya.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.64e-16 | 13 |
endo-epithelial cell | 5.81e-13 | 42 |
endodermal cell | 7.55e-11 | 58 |
bronchial epithelial cell | 3.98e-09 | 3 |
mucus secreting cell | 1.18e-07 | 1 |
epithelial cell | 2.79e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.98e-09 | 3 |
epithelium of bronchus | 3.98e-09 | 3 |
seminal vesicle | 2.83e-07 | 1 |
seminal fluid secreting gland | 2.83e-07 | 1 |
parotid gland | 4.34e-07 | 1 |
cheek | 4.34e-07 | 1 |
parotid gland primordium | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.28e-11 | 14 |
mucinous adenocarcinoma | 1.18e-07 | 1 |
chondrosarcoma | 4.61e-07 | 1 |
extraosseous chondrosarcoma | 4.61e-07 | 1 |
myxoid chondrosarcoma | 4.61e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 4.61e-07 | 1 |