FFCP PHASE1:Hg19::chr12:103835345..103835379,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24729 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000550650,ENST00000552977_5end | |||
|cluster_id=chr12:103835345..103835379,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_C12orf42_5end | |||
|id=chr12:103835345..103835379,- | |||
|ontology_enrichment_celltype=CL:0000542!2.76e-44!53;CL:0000051!2.76e-44!53;CL:0000838!5.99e-43!52;CL:0002087!1.70e-27!119;CL:0000738!1.62e-26!140;CL:0000945!1.21e-23!24;CL:0000826!1.21e-23!24;CL:0000791!4.46e-21!18;CL:0000789!4.46e-21!18;CL:0002420!4.46e-21!18;CL:0002419!4.46e-21!18;CL:0000790!4.46e-21!18;CL:0000037!4.87e-21!172;CL:0000566!4.87e-21!172;CL:0002031!5.83e-21!124;CL:0000988!3.21e-20!182;CL:0000236!1.38e-18!14;CL:0002032!2.23e-17!165;CL:0000837!2.23e-17!165;CL:0000084!4.25e-17!25;CL:0000827!4.25e-17!25;CL:0000625!7.42e-15!11;CL:0000624!1.94e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.54e-33;53!CL:0000791;9.04e-32;18!CL:0000789;9.04e-32;18!CL:0002419;9.04e-32;18!CL:0000236;2.95e-29;13!CL:0000945;9.17e-29;24!CL:0000084;1.74e-24;25!CL:0000625;1.39e-20;11!CL:0000624;4.68e-15;6!CL:0002087;2.87e-11;104!CL:0000898;7.92e-09;3!CL:0000226;1.10e-07;3!CL:0000842;1.10e-07;3!CL:0000623;2.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.67e-60,53;CL:0000051,1.67e-60,53;CL:0000838,2.62e-58,52;CL:0000791,6.36e-32,18;CL:0000789,6.36e-32,18;CL:0002420,6.36e-32,18;CL:0002419,6.36e-32,18;CL:0000790,6.36e-32,18;CL:0000236,2.35e-31,14;CL:0002087,5.19e-29,115;CL:0000945,9.44e-29,24;CL:0000826,9.44e-29,24;CL:0000738,5.03e-28,136;CL:0000084,1.41e-24,25;CL:0000827,1.41e-24,25;CL:0002031,1.85e-21,120;CL:0000625,1.16e-20,11;CL:0000037,2.61e-20,168;CL:0000988,1.19e-18,177;CL:0002032,2.98e-16,161;CL:0000837,2.98e-16,161;CL:0000624,3.84e-15,6;CL:0000898,7.72e-09,3;CL:0000226,9.09e-08,3;CL:0000842,9.09e-08,3;CL:0000623,2.03e-07,3;CL:0000825,2.03e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;7.54e-33;53!CL:0000790;9.04e-32;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.65e-19!115;UBERON:0000178!1.28e-15!15;UBERON:0000179!1.28e-15!15;UBERON:0000463!1.28e-15!15;UBERON:0004177!1.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.18e-20;15!UBERON:0000179;5.18e-20;15!UBERON:0000463;5.18e-20;15!UBERON:0002390;3.30e-14;32!UBERON:0002193;9.32e-10;42!UBERON:0002106;2.22e-08;3!UBERON:0004177;3.92e-08;5!UBERON:0005057;3.92e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.53e-20,15;UBERON:0000179,4.53e-20,15;UBERON:0000463,4.53e-20,15;UBERON:0004177,7.21e-09,7;UBERON:0005057,7.21e-09,7;UBERON:0002106,2.31e-08,3;UBERON:0004854,2.31e-08,3;UBERON:0009034,2.31e-08,3;UBERON:0002095,2.31e-08,3;UBERON:0004782,2.31e-08,3;UBERON:0003281,2.31e-08,3;UBERON:0009664,2.31e-08,3;UBERON:0002296,2.31e-08,3;UBERON:0005602,2.31e-08,3;UBERON:0001179,2.31e-08,3;UBERON:0006293,2.31e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58480434487708,5.91124244039609,6.4542840677217,0,1.53531759238885,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0.651032612147555,0.671746422719773,3.56283032620878,0,0,1.13362783106643,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0.962787081228281,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,45.7590235599439,41.506534455922,45.3649719470413,32.004766692488,37.6372227813852,41.3821756767228,29.0859744025339,25.7594513724548,33.014352208348,20.5533016279829,31.3464047062688,1.32171328579026,1.68152568894461,0,8.06510057466716,1.96505381374582,4.31763147898969,0.501559486172034,19.881258264649,30.3006595670229,23.3792074089494,0.445641827540694,7.65975359434577,4.87374568083967,8.93652750424551,0,0,5.75532666112866,6.07970039128866,4.05724320029073,14.0872235003957,15.2498272011136,8.36284190439814,1.0197840842781,10.7301738208538,9.62156847351364,11.3858861408776,7.00843911513013,7.1619179924206,4.75226022224187,4.81840381048873,3.58362511232371,3.74792179657038,4.97232229292435,4.10563998460523,2.62088766192152,0.534880391567015,5.35850294366356,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.715471872916026,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,1.94064817373566,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,3.8828556147351,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,3.04468565539302,1.52927441428475,4.5571774973933,4.2881719582402,6.58179636937911,1.94541993357815,3.24018862342869,3.17250070517708,0,0,0,7.06052065477731,0,0.284567373393656,0,0,0,0,0.324621940274555,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,2.76283915531148,0,0,0,0,0,0,0,1.57829449019094,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0.296521128680622,0.123563938946503,0,0.269604531922708,0,0,10.7648325637243,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13291328643403,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0.747511887973863,0,1.24271716604159,5.45782623993146,2.37133958277533,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,4.14842355200805,0,0.203909198930495,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0.231522474323834,0,0,0,0,0.196308467114945,0.297046400327086,0,0,6.76684209454946,3.0939786227317,18.3891726901869,0,0,0,0,1.37618785021362,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0.213233981900981,0,0.968833647540092,1.80016671457988,0,0,0,0.435433495793923,0,5.45551629418159,0.717222053926764,0,0,0,0,0,0,0.122241444182866,0,0,8.05095174364105,0.641136984606466 | |||
|short_description=p1@C12orf42 | |||
}} |
Latest revision as of 22:40, 15 September 2015
Short description: | p1@C12orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf42_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000550650, ENST00000552977_5end |
EntrezGene: | C12orf42 |
HGNC: | 24729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.67e-60 | 53 |
common lymphoid progenitor | 1.67e-60 | 53 |
lymphoid lineage restricted progenitor cell | 2.62e-58 | 52 |
mature alpha-beta T cell | 6.36e-32 | 18 |
alpha-beta T cell | 6.36e-32 | 18 |
immature T cell | 6.36e-32 | 18 |
mature T cell | 6.36e-32 | 18 |
immature alpha-beta T cell | 6.36e-32 | 18 |
B cell | 2.35e-31 | 14 |
nongranular leukocyte | 5.19e-29 | 115 |
lymphocyte of B lineage | 9.44e-29 | 24 |
pro-B cell | 9.44e-29 | 24 |
leukocyte | 5.03e-28 | 136 |
T cell | 1.41e-24 | 25 |
pro-T cell | 1.41e-24 | 25 |
hematopoietic lineage restricted progenitor cell | 1.85e-21 | 120 |
CD8-positive, alpha-beta T cell | 1.16e-20 | 11 |
hematopoietic stem cell | 2.61e-20 | 168 |
hematopoietic cell | 1.19e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.98e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.98e-16 | 161 |
CD4-positive, alpha-beta T cell | 3.84e-15 | 6 |
naive T cell | 7.72e-09 | 3 |
single nucleate cell | 9.09e-08 | 3 |
mononuclear cell | 9.09e-08 | 3 |
natural killer cell | 2.03e-07 | 3 |
pro-NK cell | 2.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.53e-20 | 15 |
haemolymphatic fluid | 4.53e-20 | 15 |
organism substance | 4.53e-20 | 15 |
hemopoietic organ | 7.21e-09 | 7 |
immune organ | 7.21e-09 | 7 |
spleen | 2.31e-08 | 3 |
gastrointestinal system mesentery | 2.31e-08 | 3 |
stomach region | 2.31e-08 | 3 |
mesentery | 2.31e-08 | 3 |
gastrointestinal system serosa | 2.31e-08 | 3 |
mesentery of stomach | 2.31e-08 | 3 |
gut mesentery | 2.31e-08 | 3 |
dorsal mesentery | 2.31e-08 | 3 |
dorsal mesogastrium | 2.31e-08 | 3 |
peritoneal cavity | 2.31e-08 | 3 |
spleen primordium | 2.31e-08 | 3 |