FFCP PHASE1:Hg19::chr12:103353566..103353596,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:103353566..103353596,+ | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_at_chr12:103353566..103353596,+ | |||
|id=chr12:103353566..103353596,+ | |||
|ontology_enrichment_celltype=CL:0000080!2.95e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.17e-17;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!3.41e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.57e-10;14!DOID:5409;1.38e-09;4!DOID:4362;6.34e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.57e-10,14;DOID:5409,1.32e-09,4;DOID:4362,6.55e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.05e-26!82;UBERON:0001049!2.07e-24!57;UBERON:0005068!2.07e-24!57;UBERON:0006241!2.07e-24!57;UBERON:0007135!2.07e-24!57;UBERON:0005743!2.24e-24!86;UBERON:0000073!1.19e-23!94;UBERON:0001016!1.19e-23!94;UBERON:0002780!5.21e-19!41;UBERON:0001890!5.21e-19!41;UBERON:0006240!5.21e-19!41;UBERON:0003080!1.73e-18!42;UBERON:0002791!6.37e-18!33;UBERON:0001893!2.49e-17!34;UBERON:0000955!5.45e-17!69;UBERON:0006238!5.45e-17!69;UBERON:0003075!1.59e-16!86;UBERON:0007284!1.59e-16!86;UBERON:0002616!2.32e-16!59;UBERON:0002346!1.39e-15!90;UBERON:0002020!9.75e-15!34;UBERON:0003528!9.75e-15!34;UBERON:0002240!1.28e-13!3;UBERON:0002619!2.17e-13!22;UBERON:0001869!3.37e-13!32;UBERON:0007023!1.50e-12!115;UBERON:0004121!7.57e-12!169;UBERON:0003056!8.27e-12!61;UBERON:0001950!8.93e-12!20;UBERON:0000956!1.16e-11!25;UBERON:0000203!1.16e-11!25;UBERON:0000924!1.94e-11!173;UBERON:0006601!1.94e-11!173;UBERON:0000153!1.91e-10!129;UBERON:0007811!1.91e-10!129;UBERON:0000033!6.84e-09!123;UBERON:0001871!7.62e-09!7;UBERON:0005174!2.36e-08!5;UBERON:0001137!2.36e-08!5;UBERON:0003076!4.03e-07!15;UBERON:0003057!4.03e-07!15;UBERON:0000025!5.51e-07!194;UBERON:0000200!8.75e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.06e-12;3!UBERON:0005290;3.06e-12;3!UBERON:0000002;8.25e-07;6!UBERON:0001560;8.25e-07;6!UBERON:0002298;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.89e-12,3;UBERON:0005290,2.89e-12,3;UBERON:0010096,2.89e-12,3;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6;UBERON:0002298,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.86494757262552,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.682986574053893,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10545517115895,0,0.118920090777569,0,0.109940516745429,2.71733118420012,0,0,3.29222107453066,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:103353566..103353596,+ | |||
}} |
Latest revision as of 04:11, 24 July 2015
Short description: | p@chr12:103353566..103353596, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:103353566..103353596, + |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.89e-12 | 3 |
myelencephalon | 2.89e-12 | 3 |
future myelencephalon | 2.89e-12 | 3 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
brainstem | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.57e-10 | 14 |
lung small cell carcinoma | 1.32e-09 | 4 |
cervical cancer | 6.55e-08 | 5 |