FFCP PHASE1:Hg19::chr11:805224..805259,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55367 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16491 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HB75 | |||
|association_with_transcript=0bp_to_ENST00000347755,ENST00000527357,NM_145886,NM_145887,uc001lrn.1,uc001lro.1,uc001lrp.1_5end | |||
|cluster_id=chr11:805224..805259,- | |||
|description=CAGE_peak_2_at_PIDD_5end | |||
|id=chr11:805224..805259,- | |||
|ontology_enrichment_celltype=CL:0000003!5.01e-10!722;CL:0000548!4.23e-09!679;CL:0000004!4.23e-09!679;CL:0000255!4.23e-09!679;CL:0000066!7.14e-09!254;CL:0000012!8.27e-09!682;CL:0000055!1.11e-08!180;CL:1000449!1.56e-07!16;CL:0002321!1.95e-07!248;CL:0000220!4.69e-07!246;CL:0000333!5.68e-07!41;CL:1000497!6.12e-07!18;CL:0002518!6.12e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.79e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.85e-08,253;CL:1000449,1.80e-07,15;CL:0000333,4.21e-07,41;CL:0002321,4.29e-07,250;CL:0000133,9.79e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.70e-12!51;DOID:0060083!1.70e-12!51;DOID:1240!2.18e-12!39;DOID:8692!5.10e-09!31;DOID:14566!5.68e-09!239;DOID:162!1.24e-08!235;DOID:0050686!2.49e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.36e-10;39!DOID:8692;5.99e-09;31!DOID:2531;3.08e-08;51!DOID:0060083;3.08e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.93e-13,51;DOID:0060083,5.93e-13,51;DOID:1240,8.00e-13,39;DOID:8692,2.34e-09,31;DOID:14566,3.22e-08,239;DOID:162,5.74e-08,235;DOID:0050686,6.05e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004211!1.56e-07!16;UBERON:0001285!1.56e-07!16;UBERON:0007684!1.56e-07!16;UBERON:0003220!1.56e-07!16;UBERON:0004208!1.56e-07!16;UBERON:0006555!6.17e-07!17;UBERON:0005103!6.17e-07!17;UBERON:0000083!6.17e-07!17;UBERON:0009201!6.17e-07!17;UBERON:0004819!6.17e-07!17;UBERON:0006553!6.17e-07!17;UBERON:0003074!6.17e-07!17;UBERON:0003060!6.17e-07!17;UBERON:0000353!6.73e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.79e-07;15!UBERON:0004819;1.79e-07;15!UBERON:0001285;1.79e-07;15!UBERON:0007684;1.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.80e-07,15;UBERON:0009773,1.80e-07,15;UBERON:0001231,1.80e-07,15;UBERON:0001285,1.80e-07,15;UBERON:0007684,1.80e-07,15;UBERON:0004208,1.80e-07,15;UBERON:0006555,7.61e-07,16;UBERON:0004819,7.61e-07,16;UBERON:0000353,8.89e-07,15 | |||
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| |||
|short_description=p2@PIDD | |||
}} |
Latest revision as of 17:01, 24 September 2015
Short description: | p2@PIDD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIDD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347755, ENST00000527357, NM_145886, NM_145887, uc001lrn.1, uc001lro.1, uc001lrp.1_5end |
EntrezGene: | PIDD |
HGNC: | 16491 |
UniProt: | Q9HB75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.85e-08 | 253 |
epithelial cell of nephron | 1.80e-07 | 15 |
migratory neural crest cell | 4.21e-07 | 41 |
embryonic cell | 4.29e-07 | 250 |
neurectodermal cell | 9.79e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.80e-07 | 15 |
renal tubule | 1.80e-07 | 15 |
nephron tubule | 1.80e-07 | 15 |
nephron | 1.80e-07 | 15 |
uriniferous tubule | 1.80e-07 | 15 |
nephrogenic mesenchyme | 1.80e-07 | 15 |
excretory tube | 7.61e-07 | 16 |
kidney epithelium | 7.61e-07 | 16 |
parenchyma | 8.89e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.93e-13 | 51 |
immune system cancer | 5.93e-13 | 51 |
leukemia | 8.00e-13 | 39 |
myeloid leukemia | 2.34e-09 | 31 |
disease of cellular proliferation | 3.22e-08 | 239 |
cancer | 5.74e-08 | 235 |
organ system cancer | 6.05e-07 | 137 |