FFCP PHASE1:Hg19::chr11:67290913..67290920,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51475 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1385 | |||
|TSSclassifier=strong | |||
|UniProt=F5H458,Q9NPB3 | |||
|association_with_transcript=-14bp_to_ENST00000545205,NM_016366,uc001omc.1,uc001omd.1,uc001ome.1_5end | |||
|cluster_id=chr11:67290913..67290920,- | |||
|coexpression_cluster_id=C535 | |||
|description=CAGE_peak_1_at_CABP2_5end | |||
|id=chr11:67290913..67290920,- | |||
|ontology_enrichment_celltype=CL:0000306!9.63e-07!4;CL:0002222!9.63e-07!4;CL:0002224!9.63e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000243;9.17e-13;15!CL:0000125;9.17e-13;15!CL:0000095;1.55e-11;17!CL:0002319;1.98e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,9.17e-13,15;CL:0000125,9.17e-13,15;CL:0000030,9.17e-13,15;CL:0000339,9.17e-13,15;CL:0000095,1.55e-11,17;CL:0000123,1.55e-11,17;CL:0002319,1.98e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.68e-66;3!UBERON:0006238;4.28e-19;10!CL:0000339;9.17e-13;15 | |||
|ontology_enrichment_disease=DOID:3093!1.97e-08!11;DOID:5409!8.61e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.33e-17;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.33e-17,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!9.47e-19!5;UBERON:0005388!9.47e-19!5;UBERON:0001802!9.47e-19!5;UBERON:0000970!4.45e-18!20;UBERON:0002104!3.06e-17!21;UBERON:0000020!8.78e-16!23;UBERON:0001032!3.82e-15!24;UBERON:0004456!3.82e-15!24;UBERON:0000019!3.93e-11!19;UBERON:0000047!3.93e-11!19;UBERON:0004088!3.93e-11!19;UBERON:0003072!3.93e-11!19;UBERON:0003071!3.93e-11!19;UBERON:0004128!3.93e-11!19;UBERON:0001456!3.92e-10!21;UBERON:0005085!1.67e-07!29;UBERON:0010077!9.63e-07!4;UBERON:0005389!9.63e-07!4;UBERON:0000484!9.63e-07!4;UBERON:0002546!9.63e-07!4;UBERON:0000965!9.63e-07!4;UBERON:0001803!9.63e-07!4;UBERON:0003073!9.63e-07!4;UBERON:0005426!9.63e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.31e-40;5!UBERON:0005388;3.31e-40;5!UBERON:0001802;3.31e-40;5!UBERON:0000970;4.95e-23;20!UBERON:0002104;5.49e-22;21!UBERON:0000020;3.62e-20;23!UBERON:0001032;2.27e-19;24!UBERON:0004456;2.27e-19;24!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0001456;1.77e-10;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,9.87e-34,6;UBERON:0005388,9.87e-34,6;UBERON:0001802,9.87e-34,6;UBERON:0000970,5.49e-22,21;UBERON:0002104,5.49e-22,21;UBERON:0000020,2.27e-19,24;UBERON:0001032,2.27e-19,24;UBERON:0004456,2.27e-19,24;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0001456,4.74e-10,22;UBERON:0005085,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23138370497704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3445880647709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00201485541957,8.05869419836906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CABP2 | |||
}} |
Latest revision as of 18:49, 19 September 2015
Short description: | p1@CABP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CABP2_5end |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | -14bp_to_ENST00000545205, NM_016366, uc001omc.1, uc001omd.1, uc001ome.1_5end |
EntrezGene: | CABP2 |
HGNC: | 1385 |
UniProt: | F5H458Q9NPB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 9.17e-13 | 15 |
glial cell | 9.17e-13 | 15 |
glioblast | 9.17e-13 | 15 |
glioblast (sensu Vertebrata) | 9.17e-13 | 15 |
neuron associated cell | 1.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.55e-11 | 17 |
neural cell | 1.98e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
retina | 9.87e-34 | 6 |
photoreceptor array | 9.87e-34 | 6 |
posterior segment of eyeball | 9.87e-34 | 6 |
eye | 5.49e-22 | 21 |
visual system | 5.49e-22 | 21 |
sense organ | 2.27e-19 | 24 |
sensory system | 2.27e-19 | 24 |
entire sense organ system | 2.27e-19 | 24 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
face | 4.74e-10 | 22 |
ectodermal placode | 1.99e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.33e-17 | 11 |