FFCP PHASE1:Hg19::chr11:6676953..6676992,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13681 | |||
|TSSclassifier=strong | |||
|UniProt=Q96JQ0 | |||
|association_with_transcript=81bp_to_NM_003737,uc001mem.1_5end | |||
|cluster_id=chr11:6676953..6676992,- | |||
|description=CAGE_peak_2_at_DCHS1_5end | |||
|id=chr11:6676953..6676992,- | |||
|ontology_enrichment_celltype=CL:0000115!1.13e-14!35;CL:0002139!1.25e-13!24;CL:0002078!7.11e-12!44;CL:0000071!4.15e-10!18;CL:0002546!4.15e-10!18;CL:0000213!5.37e-07!57;CL:0000215!5.37e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.83e-21;36!CL:0002139;8.36e-20;24!CL:0000071;7.29e-14;18!CL:0002078;1.70e-12;45!CL:1000413;1.35e-08;9!CL:0000213;5.32e-08;58!CL:0000215;5.32e-08;58!CL:0002138;1.20e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.15e-24,36;CL:0002139,2.98e-20,24;CL:0002078,1.03e-18,45;CL:0000071,4.26e-14,18;CL:0002546,4.26e-14,18;CL:0000213,1.92e-12,58;CL:0000215,1.92e-12,58;CL:1000413,1.22e-08,9;CL:0005020,7.02e-08,6;CL:0002138,7.02e-08,6;CL:0005022,7.02e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.29e-14;18!CL:0005022;1.20e-07;6!UBERON:0004872;7.92e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.73e-20!115;UBERON:0001017!1.20e-14!82;UBERON:0000477!6.36e-14!286;UBERON:0000073!7.46e-14!94;UBERON:0001016!7.46e-14!94;UBERON:0005743!8.81e-14!86;UBERON:0003075!7.18e-13!86;UBERON:0007284!7.18e-13!86;UBERON:0001049!9.15e-13!57;UBERON:0005068!9.15e-13!57;UBERON:0006241!9.15e-13!57;UBERON:0007135!9.15e-13!57;UBERON:0002346!1.75e-12!90;UBERON:0004111!3.20e-12!241;UBERON:0002616!9.88e-12!59;UBERON:0000955!1.34e-11!69;UBERON:0006238!1.34e-11!69;UBERON:0002049!1.51e-10!79;UBERON:0007798!1.51e-10!79;UBERON:0000025!1.55e-10!194;UBERON:0000055!3.84e-10!69;UBERON:0001986!4.15e-10!18;UBERON:0004638!4.15e-10!18;UBERON:0004852!4.15e-10!18;UBERON:0004121!5.79e-10!169;UBERON:0000153!6.78e-10!129;UBERON:0007811!6.78e-10!129;UBERON:0001893!6.95e-10!34;UBERON:0000924!7.46e-10!173;UBERON:0006601!7.46e-10!173;UBERON:0000033!1.21e-09!123;UBERON:0000468!1.39e-09!659;UBERON:0000467!1.64e-09!625;UBERON:0002791!1.67e-09!33;UBERON:0002020!1.99e-09!34;UBERON:0003528!1.99e-09!34;UBERON:0000480!2.28e-09!626;UBERON:0001869!3.58e-09!32;UBERON:0000956!1.76e-08!25;UBERON:0000203!1.76e-08!25;UBERON:0003080!4.01e-08!42;UBERON:0000119!9.10e-08!312;UBERON:0002619!1.08e-07!22;UBERON:0006914!1.09e-07!25;UBERON:0002780!1.18e-07!41;UBERON:0001890!1.18e-07!41;UBERON:0006240!1.18e-07!41;UBERON:0000483!1.38e-07!309;UBERON:0001950!3.74e-07!20;UBERON:0001981!4.70e-07!60;UBERON:0007500!4.70e-07!60;UBERON:0004537!4.70e-07!60;UBERON:0006965!4.70e-07!60;UBERON:0003056!4.82e-07!61;UBERON:0001009!5.05e-07!113;UBERON:0000487!6.05e-07!22;UBERON:0002465!9.56e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.29e-14;18!UBERON:0001986;7.29e-14;18!UBERON:0004852;7.29e-14;18!UBERON:0000487;1.53e-10;22!UBERON:0001473;3.19e-10;8!UBERON:0004536;3.19e-10;8!UBERON:0006558;3.19e-10;8!UBERON:0006914;5.00e-10;25!UBERON:0003915;1.35e-08;9!UBERON:0004700;1.35e-08;9!UBERON:0001917;1.35e-08;9!UBERON:0002465;8.20e-08;10!UBERON:0000922;1.08e-07;49!UBERON:0000055;2.28e-07;65!UBERON:0002037;9.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.26e-14,18;UBERON:0001986,4.26e-14,18;UBERON:0004852,4.26e-14,18;UBERON:0000055,1.34e-13,68;UBERON:0002049,1.54e-13,78;UBERON:0007798,1.54e-13,78;UBERON:0000487,1.00e-10,22;UBERON:0001473,1.56e-10,8;UBERON:0004536,1.56e-10,8;UBERON:0006558,1.56e-10,8;UBERON:0006914,3.63e-10,25;UBERON:0004111,4.57e-09,240;UBERON:0003915,1.22e-08,9;UBERON:0004700,1.22e-08,9;UBERON:0001917,1.22e-08,9;UBERON:0007500,2.13e-08,59;UBERON:0001981,2.13e-08,59;UBERON:0004537,2.13e-08,59;UBERON:0006965,2.13e-08,59;UBERON:0001009,2.94e-08,112;UBERON:0007023,3.22e-08,114;UBERON:0004535,3.46e-08,109;UBERON:0002465,4.73e-08,10;UBERON:0004872,3.83e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,1.32558950291166,0,1.80808358407193,0.730310090387373,0.975865597581014,4.55547914884115,2.44800829493104,4.38836610069323,1.14494394852423,0.958120975510189,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,1.24564449799115,0,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.443067789167242,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0,3.00802746381534,0.724232594804119,2.3858578411533,3.40644409211845,0.567208902984407,0,0.43917392846563,1.63723844372141,0,0,0,0,0,0.238490624305342,0,0,1.19257444420023,1.72046919021225,1.38856200643038,0,3.35599548967925,2.47606237746061,1.25396979922086,2.32575083252396,1.77883131343355,2.34304428935269,5.63961043952806,0.760272105718513,3.1728067481262,2.57364156242108,8.1014194788176,1.3394959242612,1.34717623575702,0.900891843866578,4.5994991239765,2.84779697870439,1.83201743930407,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0.942974704487816,0.163461903113459,1.96764655938411,0.576175924479999,1.17160715916898,0,0,0,0.704606991862589,0.809364721840658,1.12360645361799,0,0.982674538494144,0.103325781175765,0,1.48360157567134,2.73048408581408,5.74894513452991,1.5150250255866,1.00094815897571,0.554128230968366,1.31693286264251,0.30648779579902,0.901428353439581,0.113432183160021,3.22901344239952,1.92201649936711,0.423863802319124,3.00091096084402,2.26715564324566,0.772921620136887,0.930584281657949,0.843881661206331,0.487185025805993,0.757301322732344,0.460249493211497,1.61646056818812,1.06502877754984,0.604512589365842,0.339121184620975,0,0,0,0,0.132529768321485,0.232387885739037,0.518305275076852,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,8.85786545549578,4.20725321410337,0,1.47008711385542,0,0.982827216677626,0,0,0,0,0,0,0,0,2.93227474779292,0,0,0.695582429850461,0.117408694235822,1.58803092537181,1.38895653772983,3.42457474022277,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.253991577168676,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0.285826432630578,1.23344192779897,0.43596006883328,0,0.258543431515556,0,0,1.06375246633948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,1.77866236955724,0,3.09315525111078,2.84777651068393,2.55175500661265,0,0,0,1.96306386750624,0,0.542530047399471,0.415941723061614,0,0.157702415033935,0,0.902838299183157,0,2.0694614258501,2.65690239414175,1.29058417979192,1.91143951829782,1.76221041716467,1.71571711905428,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.616838775210622,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0.546273504020151,1.04899531967539,0.451199612907412,0,0,0,0,5.68666920354483,3.2317804002538,0.863663664408557,6.16909010761157,0,0.501689773854853,0,0,0,0,0,0,0,0,1.54561517471583,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.580024309752732,0,0,0.137836572484531,0.214840489736547,0,0,0.801288320820636,0,0,0,0,0,0,1.3940745403212,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0.636406495851874,0,0,0,0.353437207037059,0,0,0,0,0,1.05650146756755,0.545999645631943,0,2.26016233240486,1.65409603063837,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.860468113224309,0,0,3.90237170477658,0.422215270595328,0.658589785919804,2.27683904259429,4.89908608342976,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0.343505344755765,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0.844501632511974,3.98495976502139,0.828851746593443,0,0.20453736500431,0,0,0,0,0,1.97286811273867,0,0,2.90799823828566,1.11321717794222,3.99227596002388,0,0,2.17499872630438,0,0,0,0,0,0.868124974666461,0.885741385813839,0.60298219312704,3.05163472634166,0.884634079449797,3.25102380848902,1.31631238292384,0,0,3.46276163267087,0,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,1.85760885457012,5.49927130440263,0,0,0,1.61762719153625,2.40773294189637,0.702793337176017,0,0,0,1.18375320854817,2.41981432097328,2.44858209304392,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.45483524732629,0,2.03382666702479,0,0,0.949661939338181,0,0,2.77488893161158,0,0,0,1.02956998717179,0,0.124252535565433,0,0.951329442515298,1.15063130943567,0,0,0,0.273810757783986,0,0,0,2.23425921017803,1.60412296808179,0.717873024576814,0.798716001995964,1.28767814440971,0.89268582976749,4.29974223915048,0,1.16495949527454,0,0,0,0,0,0.795229689809303,0.817220436669454,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0.728994679896296,0,0.472834243795189,2.25554728980492,0,0,0,2.85878130549347,0.662091970365432,0,1.62899880526114,0,0,1.19730191562487,0,0,1.13312091520126,1.02586563574658,0,0.517131825446202,0.66116300871345,0,0,0.747511887973863,0.78602152549833,2.07119527673598,0.992332043623902,0,0,0,0.544017803369474,0.7520696820681,0.612691153526923,0,0,0,0.610131324509816,0.3755727921195,0.573409195690071,0.332787154610557,1.17983165588629,0,0,0.151649117541648,0,0,0,0.579684114443301,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0.931577741257556,1.24411862352257,0,2.08698024724694,0.300515217994437,0,0,0.545545977607678,0.107410557042488,0.464033759878494,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.323474434190045,0.314531883711793,0.982886743728125,0,1.48802444071178,0.123935764259002,0.558644917973244,0,0.23658523500376,1.60114149657094,1.41070377476274,0.6124909547064,1.02766760154335,1.41696576325585,0.319267718114302,1.02558182120378,4.28521883576921,0.553258019713743,0.968853873791107,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,1.14813893851271,0.781078098613847,0.620060389503552,0.570742291745161,1.64092442705466,1.09651553371436,1.98484471355718,0,0,0,0,0,0,1.06442844195167,0,0,0.815636795721981,1.11813715056843,0,0,2.51177897121645,0.314231179832004,0,3.65263488203798,0,0,1.78691360441641,0,0,0.869291361512897,1.60342272946051,0,0,0,0.430227358820278,0.118332000730565,0.170426809518315,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.513314034281235,11.598144313382,2.4285549652957,0,0.795803100645473,0.475680363110274,0,0,0,1.23478652972711,1.09279780251979,0,4.4126697915703,0,0,0.594092800654172,2.113278637917,0,1.87967835959707,5.15663103788617,0,0,0,0,2.19100916473955,0,0.716697915757256,1.26217249754548,1.08786384305464,3.9271562130634,2.645134202577,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0,0.101988829741982,0.26721740526556,0.36757959813938,0,0.454672189309436,0.267964130156178,0,0.413731983447581,0.639701945702943,2.85677317756488,0.0645889098360061,0.558672428662721,0,0.25458863311266,1.21270313374932,0.435433495793923,2.05339980651169,0.26940821205835,1.2192774916755,2.99394320891412,0,0.106727345877715,0,0,0,5.62310643241186,2.03448089157869,1.99727032255654,1.20764276154616,0 | |||
|short_description=p2@DCHS1 | |||
}} |
Latest revision as of 16:29, 19 September 2015
Short description: | p2@DCHS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DCHS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_NM_003737, uc001mem.1_5end |
EntrezGene: | DCHS1 |
HGNC: | 13681 |
UniProt: | Q96JQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.15e-24 | 36 |
endothelial cell of vascular tree | 2.98e-20 | 24 |
meso-epithelial cell | 1.03e-18 | 45 |
blood vessel endothelial cell | 4.26e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.26e-14 | 18 |
lining cell | 1.92e-12 | 58 |
barrier cell | 1.92e-12 | 58 |
endothelial cell of artery | 1.22e-08 | 9 |
lymphangioblast | 7.02e-08 | 6 |
endothelial cell of lymphatic vessel | 7.02e-08 | 6 |
vascular lymphangioblast | 7.02e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.26e-14 | 18 |
endothelium | 4.26e-14 | 18 |
cardiovascular system endothelium | 4.26e-14 | 18 |
vessel | 1.34e-13 | 68 |
vasculature | 1.54e-13 | 78 |
vascular system | 1.54e-13 | 78 |
simple squamous epithelium | 1.00e-10 | 22 |
lymphatic vessel | 1.56e-10 | 8 |
lymph vasculature | 1.56e-10 | 8 |
lymphatic part of lymphoid system | 1.56e-10 | 8 |
squamous epithelium | 3.63e-10 | 25 |
anatomical conduit | 4.57e-09 | 240 |
endothelial tube | 1.22e-08 | 9 |
arterial system endothelium | 1.22e-08 | 9 |
endothelium of artery | 1.22e-08 | 9 |
epithelial tube open at both ends | 2.13e-08 | 59 |
blood vessel | 2.13e-08 | 59 |
blood vasculature | 2.13e-08 | 59 |
vascular cord | 2.13e-08 | 59 |
circulatory system | 2.94e-08 | 112 |
adult organism | 3.22e-08 | 114 |
cardiovascular system | 3.46e-08 | 109 |
lymphoid system | 4.73e-08 | 10 |
splanchnic layer of lateral plate mesoderm | 3.83e-07 | 83 |