FFCP PHASE1:Hg19::chr11:66063254..66063265,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:66063254..66063265,+ | |||
|description=CAGE_peak_at_chr11:66063254..66063265,+ | |||
|id=chr11:66063254..66063265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.35e-09;3!CL:0000149;1.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.81e-09,3;CL:0000149,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.35e-09;3!UBERON:0006215;1.35e-09;3!UBERON:0003057;1.35e-09;3!UBERON:0006601;6.33e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.97e-64!57;UBERON:0005068!5.97e-64!57;UBERON:0006241!5.97e-64!57;UBERON:0007135!5.97e-64!57;UBERON:0002616!1.85e-50!59;UBERON:0005743!9.37e-50!86;UBERON:0001017!1.07e-46!82;UBERON:0003075!7.83e-45!86;UBERON:0007284!7.83e-45!86;UBERON:0000955!2.42e-44!69;UBERON:0006238!2.42e-44!69;UBERON:0000073!3.46e-44!94;UBERON:0001016!3.46e-44!94;UBERON:0002020!1.78e-42!34;UBERON:0003528!1.78e-42!34;UBERON:0002346!1.98e-42!90;UBERON:0001893!2.28e-42!34;UBERON:0002780!3.47e-41!41;UBERON:0001890!3.47e-41!41;UBERON:0006240!3.47e-41!41;UBERON:0003080!4.52e-40!42;UBERON:0002791!6.53e-40!33;UBERON:0001869!7.77e-37!32;UBERON:0003056!8.18e-31!61;UBERON:0007023!1.37e-29!115;UBERON:0002308!2.16e-28!9;UBERON:0000125!2.16e-28!9;UBERON:0002420!3.41e-28!9;UBERON:0007245!3.41e-28!9;UBERON:0010009!3.41e-28!9;UBERON:0010011!3.41e-28!9;UBERON:0000454!3.41e-28!9;UBERON:0000033!1.82e-26!123;UBERON:0003076!3.25e-25!15;UBERON:0003057!3.25e-25!15;UBERON:0000153!8.02e-25!129;UBERON:0007811!8.02e-25!129;UBERON:0002619!1.78e-23!22;UBERON:0004121!2.71e-23!169;UBERON:0000924!1.58e-22!173;UBERON:0006601!1.58e-22!173;UBERON:0009663!2.57e-22!7;UBERON:0001950!3.31e-22!20;UBERON:0000956!2.21e-20!25;UBERON:0000203!2.21e-20!25;UBERON:0002298!5.48e-20!8;UBERON:0004733!8.78e-17!12;UBERON:0002028!8.78e-17!12;UBERON:0007277!8.78e-17!12;UBERON:0000025!1.29e-15!194;UBERON:0004732!2.22e-15!13;UBERON:0001871!1.91e-13!7;UBERON:0000369!4.52e-13!4;UBERON:0002435!4.52e-13!4;UBERON:0000204!4.52e-13!4;UBERON:0010082!4.52e-13!4;UBERON:0000200!2.35e-12!6;UBERON:0004111!1.44e-11!241;UBERON:0002240!4.06e-11!3;UBERON:0006331!4.06e-11!3;UBERON:0000988!7.17e-11!3;UBERON:0000349!8.19e-11!5;UBERON:0001896!1.53e-10!3;UBERON:0005290!1.53e-10!3;UBERON:0010096!1.53e-10!3;UBERON:0000483!1.84e-10!309;UBERON:0000119!2.91e-10!312;UBERON:0005383!3.90e-10!3;UBERON:0005382!3.90e-10!3;UBERON:0002771!1.60e-09!3;UBERON:0002680!2.50e-09!9;UBERON:0001895!2.50e-09!9;UBERON:0010092!2.50e-09!9;UBERON:0000064!2.90e-09!219;UBERON:0000477!4.91e-09!286;UBERON:0000475!1.31e-08!365;UBERON:0002148!8.88e-08!2;UBERON:0009662!8.88e-08!2;UBERON:0001875!1.20e-07!2;UBERON:0006514!1.20e-07!2;UBERON:0001876!1.41e-07!2;UBERON:0001873!1.90e-07!2;UBERON:0010122!1.90e-07!2;UBERON:0005174!8.26e-07!5;UBERON:0001137!8.26e-07!5;UBERON:0002021!9.65e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;5.22e-26;1!UBERON:0009661;5.22e-26;1!UBERON:0002950;5.22e-26;1!UBERON:0001891;5.22e-26;1!UBERON:0004733;2.99e-19;12!UBERON:0002028;2.99e-19;12!UBERON:0004732;7.86e-18;13!UBERON:0002298;1.70e-17;6!UBERON:0002148;1.00e-13;2!UBERON:0006331;1.00e-13;2!UBERON:0009662;1.00e-13;2!UBERON:0002680;5.22e-12;9!UBERON:0000125;5.22e-12;9!UBERON:0002308;5.22e-12;9!UBERON:0001895;5.22e-12;9!UBERON:0000988;1.35e-09;3!UBERON:0001896;1.35e-09;3!UBERON:0002240;1.35e-09;3!UBERON:0001781;1.35e-09;3!UBERON:0005174;1.35e-09;3!UBERON:0001782;1.35e-09;3!UBERON:0005290;1.35e-09;3!UBERON:0001137;1.35e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.01e-26,15;UBERON:0003057,1.01e-26,15;UBERON:0002038,4.61e-26,1;UBERON:0009661,4.61e-26,1;UBERON:0002950,4.61e-26,1;UBERON:0001891,4.61e-26,1;UBERON:0009616,4.61e-26,1;UBERON:0010286,4.61e-26,1;UBERON:0004733,3.29e-19,12;UBERON:0002028,3.29e-19,12;UBERON:0007277,3.29e-19,12;UBERON:0004732,8.57e-18,13;UBERON:0002298,2.38e-17,6;UBERON:0002148,1.37e-13,2;UBERON:0006331,1.37e-13,2;UBERON:0009662,1.37e-13,2;UBERON:0002680,5.22e-12,9;UBERON:0001895,5.22e-12,9;UBERON:0010092,5.22e-12,9;UBERON:0000125,5.83e-12,9;UBERON:0002308,5.83e-12,9;UBERON:0001049,4.14e-11,56;UBERON:0005068,4.14e-11,56;UBERON:0006241,4.14e-11,56;UBERON:0007135,4.14e-11,56;UBERON:0001017,7.40e-11,81;UBERON:0003075,8.09e-11,82;UBERON:0007284,8.09e-11,82;UBERON:0002346,2.52e-10,86;UBERON:0001016,8.41e-10,89;UBERON:0002240,1.41e-09,3;UBERON:0005174,1.41e-09,3;UBERON:0001137,1.41e-09,3;UBERON:0001896,1.54e-09,3;UBERON:0005290,1.54e-09,3;UBERON:0010096,1.54e-09,3;UBERON:0000988,1.67e-09,3;UBERON:0001782,1.81e-09,3;UBERON:0005424,1.81e-09,3;UBERON:0000955,4.22e-09,68;UBERON:0006238,4.22e-09,68;UBERON:0010371,1.46e-08,104;UBERON:0007023,6.48e-08,114;UBERON:0000073,9.09e-08,53;UBERON:0002616,9.09e-08,53;UBERON:0001781,2.04e-07,4;UBERON:0004121,6.06e-07,171;UBERON:0000924,6.06e-07,171;UBERON:0006601,6.06e-07,171;UBERON:0010314,9.33e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,1.99945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39152147242777,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.120596438625408,1.52581736317083,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0.221858103073705,0.248385611765534,0,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.638535436228605,0.615349092722265,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.467878926924211,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0.235676547101626,1.17785080268967,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,1.29005624836306,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:66063254..66063265,+ | |||
}} |
Latest revision as of 01:00, 24 July 2015
Short description: | p@chr11:66063254..66063265, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66063254..66063265, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.81e-09 | 3 |
visual pigment cell | 2.04e-07 | 4 |