FFCP PHASE1:Hg19::chr11:62622938..62622956,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32688 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000537024,ENST00000538266,uc001nvq.2_5end | |||
|cluster_id=chr11:62622938..62622956,- | |||
|description=CAGE_peak_2_at_SNHG1_5end | |||
|id=chr11:62622938..62622956,- | |||
|ontology_enrichment_celltype=CL:0000066!7.99e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.83e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.84e-34!235;DOID:14566!1.38e-33!239;DOID:0050687!4.83e-21!143;DOID:305!2.24e-16!106;DOID:2531!6.26e-15!51;DOID:0060083!6.26e-15!51;DOID:0050686!3.53e-13!137;DOID:1240!1.40e-11!39;DOID:8692!1.53e-08!31;DOID:3095!7.04e-07!22;DOID:2994!7.04e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.14e-09;39!DOID:2531;1.77e-09;51!DOID:0060083;1.77e-09;51!DOID:8692;1.04e-08;31!DOID:3095;2.38e-07;22!DOID:2994;2.38e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.33e-35,235;DOID:14566,4.83e-35,239;DOID:0050687,5.01e-22,143;DOID:305,7.27e-17,106;DOID:2531,6.54e-16,51;DOID:0060083,6.54e-16,51;DOID:0050686,2.12e-14,137;DOID:1240,2.40e-12,39;DOID:8692,4.17e-09,31;DOID:3095,5.54e-07,22;DOID:2994,5.54e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.12763523276777,1.0007329835313,0,0.872338524100369,2.53299878168311,0,1.04474251279935,1.47440361900905,1.39560233594486,0.436882744260345,0.263766978228454,0.618831764800233,0,0,0,1.46062018077475,0.487932798790507,1.60057375499824,1.02000345622126,0,1.71741592278634,1.50561867580173,2.13422487311165,5.04328477936478,5.33653831424647,5.98201937983962,0,0,3.71558695958582,0.919421224478927,3.614471025339,5.17655614233503,6.27484324700443,3.9807385096478,0.293600439334847,2.21598163412751,1.60435557976113,0.868043482863407,0.223915474239924,0.971680998056939,1.28787783817093,0.436194716338694,1.51150377475524,0.485168122375632,0.697287110717054,0.411167888021826,0.309706370895104,0,1.0246428261164,0.945928919554341,1.37898272294647,1.93645405075148,1.35426486594342,0.188242339542605,1.09162460023138,1.34834090667051,0.612167784741805,0.641858054152187,2.55734850319616,0.659702600373432,0.199463657621632,0.426224750532694,0.580418477257168,0.56738522469114,2.4912889959823,0.502497330513487,1.5644487552606,0.65156653411535,0.605399502633369,0.736555271975129,0.949387162322653,2.32380814943136,3.82687739937078,1.46761051855863,3.03287304095537,1.65194582125657,1.44653028027372,0,1.79025009479181,1.82664153764634,1.75996244461323,0,0,0,0,0,0.661044872784862,0,5.69212969109448,4.69789751496751,3.82273228125229,0,0,5.00429761072646,7.08155172409799,4.71612915298998,4.93443597598822,1.17030546773475,0.651844533267181,0.473447805734733,13.6378709885538,1.89397776704795,6.77593587192126,6.20294904834139,1.35401931882508,1.92136979588513,1.43065282315866,1.80881695064044,1.65810010671509,1.73881851441031,3.85545064221357,4.54819407752512,4.18142095219907,2.15287751125376,0,0.34362744548263,4.30133476433155,0,0,0,0.150575119077773,0,0,0,0,4.63695509416885,5.88368430723716,5.21367853978076,0,0,0.255725123687061,1.80719576192283,0,0.724232594804119,0.795285947051099,0.486634870302636,1.22895262313288,1.77383517970051,0.87834785693126,1.0478326039817,0.728590576585084,2.59549109949101,0.324547393654683,1.0447784237956,0.398873881556595,5.48528435902286,0,0,0.993812036833525,2.58070378531837,0.694281003215189,1.69592382577203,0.419499436209906,0.550236083880135,1.67195973229448,1.29208379584664,1.06729878806013,1.00416183829401,0.805658634218294,0,0.732186172644509,2.20597848207521,0.81014194788176,2.14319347881791,1.12264686313085,0.337834441449967,4.5994991239765,1.89853131913626,0.732806975721629,0,0,0,0,1.51956613997496,5.03154887090231,3.15520282823695,0.354668382198357,0,1.06748995729705,1.2333377420858,1.55605517699883,2.2900814251847,1.30769522490767,0.454072282934794,0.576175924479999,2.34321431833797,1.24864030732128,1.1409436430889,1.04614076386261,13.974705338608,5.34180716414834,4.6348766211742,1.63323337003915,2.57952066354713,1.96318984233954,0,0.247266929278557,0,0,1.5150250255866,1.7516592782075,0.554128230968366,0.877955241761676,0.30648779579902,0.300476117813194,1.02088964844019,1.79389635688862,1.49490172172997,1.05965950579781,1.20036438433761,1.64884046781502,1.8034837803194,0.558350568994769,2.70042131586026,1.46155507741798,1.51460264546469,1.28869858099219,4.68773564774555,0.355009592516614,1.71278566986988,0.847802961552438,0,0,1.43402297694502,4.63500083292463,3.18071443971565,3.71820617182459,2.28054321033815,3.78481276313443,3.28479623168247,1.56449532329816,0.643240938192885,0,1.85747171212792,1.44375896333917,2.9576700009961,2.52877035117153,1.44606617930089,3.639701100169,3.05031221729369,3.79632990577755,2.02246962240247,3.72820783738158,2.30848294167834,0.738155454624648,0,0.8231480226628,0,2.53510069643662,1.96565443335525,0.590789906681404,10.5951143859516,3.19769940212095,0.686271241194102,0.98775256867763,3.37205259772859,2.71428225511403,3.42577247086559,1.95484983186195,0,1.44331342025273,0.463721619900307,0.469634776943287,1.01056513432752,0.925971025153221,0.951270761172991,3.1608175918371,0,0,0.234004265139238,0.594524649154913,0,0,1.84307626415102,8.23938408866204,8.13775027839093,2.68367875415648,0.492663237895943,0.616339038092582,0.621984346622316,0.576479813667846,1.64115163454294,1.77794104018073,0.381988425558278,1.17217447210047,0,1.64523988325318,1.20137223137567,0.857479297891735,1.23344192779897,1.30788020649984,1.6134422880609,0.646358578788889,0,2.535908257668,0.26593811658487,0,1.54324424557285,1.41849132023278,1.3321108950805,0.714889968290738,0.542621605391443,0,1.95441710576241,1.42156779497018,3.95975936466715,0.602878754119172,0,0.399891964728228,0,0,0,1.19812427745791,0,1.42636905040718,0.579125226670317,0.61642896765115,1.07436577943937,2.57795831185113,2.95546140302891,4.9594342217689,2.05348858047597,1.52456774533478,1.30139853857622,3.86644406388848,1.34013012267479,3.18969375826582,1.49801404789436,0,0,2.20844685094452,0,1.08506009479894,1.03985430765404,1.60586089917446,0.946214490203608,1.05427273493442,0.601892199455438,0,1.03473071292505,0,0.368738337083406,1.39013783148933,0.391602314925481,0.343143423810856,3.51505644408909,3.45142721309787,1.81436848265855,6.66880657181771,4.99306318531491,1.81434175997808,1.24053903909388,1.07423381301644,1.12264037773229,0.640695746278505,1.02341449813341,0.160853921143607,1.48418066444991,2.15893571323718,2.13074070375753,0.821271560138091,0.519254429183621,1.51073491997947,5.438675231623,1.00253235151642,6.07734526976916,3.21480454860899,1.45672934405374,0.655622074797121,0,0.847168708148562,2.35304930753057,0,0.844413031143006,0,0.510281115829547,0.431831832204279,0,0.541892875087706,0,1.78413391131527,0.831076008928724,1.56712328305525,5.04297716285649,4.70583811844821,0.512900250232778,1.64007322849853,3.25378394664303,1.854738209659,3.02179233900533,3.05285149706176,0.574265537996172,3.25030123018261,3.21367859688319,4.54352375972973,2.00263202249038,2.91656981979646,5.51346289938122,1.50388342815583,2.0302337147992,3.23861184181183,0.890320356467374,7.60310610660499,5.76570202095319,8.29482631214797,1.31505115112215,0,1.5740617341532,1.3940745403212,0.308033580176089,0,1.73986598415015,0.55597265731176,1.14499909393593,0.744316738719335,0.316379424718726,0,1.27948895655667,1.28381696410176,0.95460974377781,2.35484592059769,0.719489830333259,0.54907405947211,0.589062011728432,0.606547444719948,0,0.842516912477962,0.48763373908959,0.243713489631284,0,2.04749867111979,0.989838023675989,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,1.54911749049875,1.40847801266121,1.72093622644862,0.687743287091848,0.35667105148125,2.12856638442359,1.05553817648832,1.31717957183961,0.379473173765715,1.04980416073495,4.71488352355009,2.68120910214315,9.80018863751903,1.50630081242847,0,0,0.886860307073351,1.37834040124176,3.55213326462519,0.764637207142375,1.70894156152249,0.952927101831156,1.23408681925858,1.29694662238543,2.70015718619057,2.37937552888281,1.70918513803957,0.962479855263359,4.41072388765857,8.36114288065734,5.91503773203424,5.12221272108582,6.69590345461054,1.1974762285969,0.5745161103971,7.19690181261202,6.81706074576566,5.05434920604226,1.59764275323235,10.0275133294735,7.51903431270201,6.94096288986573,7.86881568008128,4.237793851012,1.27753871307098,6.87010689511529,2.76516687877612,2.68411329470899,2.16903884225481,3.90776190804081,3.34087408674291,3.69262196843137,5.40911356951966,1.99843180798692,0,1.12284324244932,1.02555725490326,1.33496573924465,2.563197838382,1.13654458722565,3.58116727106535,1.78178808499583,2.15012491469462,0.994147647766298,1.1253553312841,1.8922479853894,6.42735109484362,1.05562704063997,0.398495976502139,1.65770349318689,6.80218419206545,1.73856760253663,3.93871377475422,0.933118762985422,7.99828325211209,6.98182581234876,4.09257896181497,1.1837208676432,0,0,0,1.02044907978036,0,1.82299432759663,1.39935999993913,0.724999575434793,1.593108275997,1.01701460117107,3.54581522651905,5.8606373451049,4.08246458736556,9.54937472133108,0,0.964771509003264,0,0.663475559587348,0,1.09692698576986,18.1927234076714,1.67308493134324,1.15425387755696,0.797594390929008,3.4584585658209,3.94933635402997,3.04212641381623,2.87101043758728,1.00757352742049,2.66517388009317,8.17546385565892,1.56980256395025,2.49317522850235,7.21906113974978,6.66612616680314,8.05543617484045,7.96965677441577,7.94682894901893,3.16497096792041,6.8557779426842,3.67517985728246,10.6030433473625,0,0.973033209536731,1.83309043480088,12.4538874045861,9.76155117677373,6.36973891983278,0.606610196826093,1.60515529459758,0.234264445725339,10.0350134068616,2.34797542718508,1.45668227720456,1.57833761139756,0,0.91821828489147,0.505492637027904,15.7839590385217,2.69589297632843,3.32326936353593,2.31694369112849,3.45326210247948,0,1.42304773014896,2.35746944122336,3.29763502836749,3.72371110174635,4.35296032902013,0,1.20390222730132,4.45079123929792,10.3786830262383,3.530964653288,1.26085721434945,3.26547668758551,0.90392296312213,2.19267079434801,2.38457534043588,0.189932387867636,3.51992488922645,1.84365286578528,0.426905989478705,3.59657297247834,2.01726584015748,2.06165873098648,9.09453488668412,25.7858088398788,2.85780831800495,1.64985824231757,1.35904206073614,1.35983700206033,3.05994652908965,3.17845648891671,0.600420288709789,0.684526894459965,0,1.28929632425987,3.94331031418972,0.837847203816763,0,0.717873024576814,2.39614800598789,0,0,0.806201669840715,0,2.32991899054908,2.83619456306005,2.47247575143499,2.89835238572995,4.2323817051342,2.2015066337104,0,0.681017030557878,9.80594205636617,13.0662464767372,13.7095311549631,0.899895566206002,1.5476039091159,0.121499113316049,0.335434687599266,0.630445658393585,0.996637174564964,1.5840050477911,1.07572403599707,2.30298236783334,0.714695326373367,0,1.77987976358325,0.542999601753713,0.864221491201268,1.30634944043764,0,3.77625595446959,0.170388021785422,1.35974509824151,0.58620893471233,0,0.646414781807753,1.05786081394152,1.19760786519031,1.40963004463334,0.320362237703084,2.04365596629566,0.414239055347196,0,1.7785046870815,5.9678373206639,6.38341257770182,0,0.2506898940227,0,0,2.98402782875445,0,1.70836770862748,1.251909307065,0.573409195690071,0.221858103073705,0.620964029413834,12.0363312394521,1.8747061194316,6.06596470166591,2.56918800190471,2.58792401667989,3.27834434064817,4.20270982971393,0.74627401443437,2.10341978862502,0,0.378806010550178,0.251567901752575,0,1.37304041038154,0.453692771289717,0.466311601748341,0.73927574994817,0.318593534327405,0.899606224327209,0.776314784381297,0,0.53168342911599,0.521745061811734,0.300515217994437,1.52322084867518,0,0.363697318405119,0.322231671127465,0.464033759878494,0.398095888698616,2.40016658797892,0.343395705182793,1.01024846629776,0,1.15571898244382,0.214441591374926,12.5277260143302,1.58694147858591,0.926089897295336,11.2578884072975,0.895444205407437,1.85280868296583,1.97355644620836,3.18040462702586,4.24410884196013,4.56144589763296,3.07489822305536,1.72715170865599,2.73473960559644,0.414775308455192,0.389720617678777,0.531459361253452,0.490696182767533,7.53502652346749,4.17813944881323,1.26787274015176,1.79988656269437,4.80112783623634,3.96094453219876,2.27006381426734,1.10463570151104,8.11301144772778,4.97661808026378,7.54576790691545,1.83302179374359,5.97610579052406,9.3920288845132,5.77090601843686,9.14072156437236,6.19678821295011,1.11728983594649,0,7.0975570501128,0,0.705351887381368,0.6124909547064,0.321146125482298,0,0.957803154342908,0.41023272848151,1.51243017733031,0.414943514785307,0.161475645631851,0,2.94443155503077,4.9547283806051,6.05314375121541,4.96760364446454,1.1441462864015,2.0710797781803,1.5913297769302,1.88025820873143,1.0085253435176,1.56302802246618,1.04762677792569,3.93052602024232,1.18284868973636,0.0675375846183947,0.781078098613847,1.03343398250592,0.126831620387814,2.18789923607288,1.09651553371436,1.98484471355718,11.0798883946561,1.02209942111676,1.07140367175657,0,0,1.36597314810779,0.709618961301111,4.49412551467539,0.514464028312255,0.271878931907327,0.72350050919134,5.2005289988946,2.22462803784138,1.02041020705668,0.471346769748006,13.1727916757481,1.82631744101899,3.23891386827932,7.16627531830575,0.857718530119876,7.26862613970542,1.74362138052188,13.5609452396012,0.801711364730253,1.24329698497822,1.0243108625637,0,0.430227358820278,2.721636016803,2.8120423570522,0.846774100381858,4.81124423942505,1.24082554265728,2.8666168169323,0.671132590786754,7.95016892283468,2.19452264968085,0.647428837187895,1.23195368227496,2.3196288626764,0.485710993059139,0,5.76957247967968,1.66488127088596,11.0687160398181,6.26660945448946,2.8682940277668,0.848915739187391,3.49695296806332,6.1141248526998,0.490296643507811,1.17838273550813,1.57046773691956,1.18818560130834,0.4226557275834,0.509781344063451,1.12780701575824,2.06265241515447,2.89829352182294,1.2498775702396,5.99921281916676,14.9248942041853,0.730336388246517,0.458729283404541,1.14671666521161,2.68211655728414,0.339957450954573,0.436350690340377,2.1161073620616,0.371995018166751,0.924351257262837,1.29787968637137,1.13549782351571,5.02621631032999,2.02717601618299,4.79347499787314,4.54269588951453,11.7625471404601,6.76910356089413,0.606229585745915,0.803892390468535,3.31667775783512,0.930896962757057,1.70587185520785,1.1903221573187,2.0668451147522,2.29676442894674,2.01837352645104,1.2729431655633,0.808468755832877,2.17716747896961,0.684466602170562,2.08791364345221,0.78894425931944,1.99596213927608,2.52350132694021,7.15073217380694,3.8614456457388,0.988077223172456,2.34640942403454,0.977931553462932,2.03448089157869,1.33151354837103,1.40891655513718,1.60284246151616 | |||
|short_description=p2@SNHG1 | |||
}} |
Latest revision as of 21:55, 18 September 2015
Short description: | p2@SNHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNHG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537024, ENST00000538266, uc001nvq.2_5end |
EntrezGene: | SNHG1 |
HGNC: | 32688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.83e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.33e-35 | 235 |
disease of cellular proliferation | 4.83e-35 | 239 |
cell type cancer | 5.01e-22 | 143 |
carcinoma | 7.27e-17 | 106 |
hematologic cancer | 6.54e-16 | 51 |
immune system cancer | 6.54e-16 | 51 |
organ system cancer | 2.12e-14 | 137 |
leukemia | 2.40e-12 | 39 |
myeloid leukemia | 4.17e-09 | 31 |
germ cell and embryonal cancer | 5.54e-07 | 22 |
germ cell cancer | 5.54e-07 | 22 |