FFCP PHASE1:Hg19::chr11:56769985..56769989,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:56769985..56769989,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr11:56769985..56769989,- | |||
|id=chr11:56769985..56769989,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.65e-29;7!UBERON:0006241;1.12e-17;3!UBERON:0003057;1.12e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-20!115;UBERON:0001049!3.03e-20!57;UBERON:0005068!3.03e-20!57;UBERON:0006241!3.03e-20!57;UBERON:0007135!3.03e-20!57;UBERON:0002298!1.04e-17!8;UBERON:0001017!9.01e-16!82;UBERON:0002616!5.19e-15!59;UBERON:0005743!7.95e-15!86;UBERON:0002346!2.67e-14!90;UBERON:0000955!1.13e-13!69;UBERON:0006238!1.13e-13!69;UBERON:0003075!1.46e-13!86;UBERON:0007284!1.46e-13!86;UBERON:0001896!1.98e-13!3;UBERON:0005290!1.98e-13!3;UBERON:0010096!1.98e-13!3;UBERON:0000073!5.47e-13!94;UBERON:0001016!5.47e-13!94;UBERON:0003076!1.48e-12!15;UBERON:0003057!1.48e-12!15;UBERON:0002780!5.81e-11!41;UBERON:0001890!5.81e-11!41;UBERON:0006240!5.81e-11!41;UBERON:0003080!1.19e-10!42;UBERON:0002791!1.24e-09!33;UBERON:0001893!2.64e-09!34;UBERON:0002020!3.32e-09!34;UBERON:0003528!3.32e-09!34;UBERON:0001897!4.12e-09!2;UBERON:0004733!3.42e-08!12;UBERON:0002028!3.42e-08!12;UBERON:0007277!3.42e-08!12;UBERON:0000924!3.74e-08!173;UBERON:0006601!3.74e-08!173;UBERON:0004121!1.35e-07!169;UBERON:0004732!1.55e-07!13;UBERON:0002021!1.87e-07!5;UBERON:0002619!2.33e-07!22;UBERON:0000033!6.22e-07!123;UBERON:0002106!7.91e-07!3;UBERON:0004854!7.91e-07!3;UBERON:0009034!7.91e-07!3;UBERON:0002095!7.91e-07!3;UBERON:0004782!7.91e-07!3;UBERON:0003281!7.91e-07!3;UBERON:0009664!7.91e-07!3;UBERON:0002296!7.91e-07!3;UBERON:0005602!7.91e-07!3;UBERON:0001179!7.91e-07!3;UBERON:0006293!7.91e-07!3;UBERON:0002240!9.61e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.35e-66;3!UBERON:0004177;2.71e-40;5!UBERON:0005057;2.71e-40;5!UBERON:0002240;1.12e-17;3!UBERON:0005174;1.12e-17;3!UBERON:0001137;1.12e-17;3!UBERON:0002075;4.55e-12;18!UBERON:0000077;2.14e-08;27!UBERON:0002405;2.14e-08;27!UBERON:0002390;3.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.35e-66,3;UBERON:0004854,3.35e-66,3;UBERON:0009034,3.35e-66,3;UBERON:0002095,3.35e-66,3;UBERON:0004782,3.35e-66,3;UBERON:0003281,3.35e-66,3;UBERON:0009664,3.35e-66,3;UBERON:0002296,3.35e-66,3;UBERON:0005602,3.35e-66,3;UBERON:0001179,3.35e-66,3;UBERON:0006293,3.35e-66,3;UBERON:0004177,3.65e-29,7;UBERON:0005057,3.65e-29,7;UBERON:0000945,1.11e-25,8;UBERON:0010039,1.11e-25,8;UBERON:0002240,1.12e-17,3;UBERON:0005174,1.12e-17,3;UBERON:0001137,1.12e-17,3;UBERON:0004457,1.57e-17,12;UBERON:0000042,1.57e-17,12;UBERON:0003887,1.57e-17,12;UBERON:0002075,4.55e-12,18;UBERON:0005409,1.11e-08,25;UBERON:0000077,6.91e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,52.5702266238704,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.404406797884062,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.554645257684261,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,1.78227840196252,0,0,3.853340637174,6.38133090938414,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:56769985..56769989,- | |||
}} |
Latest revision as of 22:51, 23 July 2015
Short description: | p@chr11:56769985..56769989, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:56769985..56769989, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 3.35e-66 | 3 |
gastrointestinal system mesentery | 3.35e-66 | 3 |
stomach region | 3.35e-66 | 3 |
mesentery | 3.35e-66 | 3 |
gastrointestinal system serosa | 3.35e-66 | 3 |
mesentery of stomach | 3.35e-66 | 3 |
gut mesentery | 3.35e-66 | 3 |
dorsal mesentery | 3.35e-66 | 3 |
dorsal mesogastrium | 3.35e-66 | 3 |
peritoneal cavity | 3.35e-66 | 3 |
spleen primordium | 3.35e-66 | 3 |
hemopoietic organ | 3.65e-29 | 7 |
immune organ | 3.65e-29 | 7 |
stomach | 1.11e-25 | 8 |
food storage organ | 1.11e-25 | 8 |
spinal cord | 1.12e-17 | 3 |
dorsal region element | 1.12e-17 | 3 |
dorsum | 1.12e-17 | 3 |
cavity lining | 1.57e-17 | 12 |
serous membrane | 1.57e-17 | 12 |
intraembryonic coelom | 1.57e-17 | 12 |
viscus | 4.55e-12 | 18 |
gastrointestinal system | 1.11e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |