FFCP PHASE1:Hg19::chr11:5247974..5247996,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4827 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=56bp_to_ENST00000475226_5end | |||
|cluster_id=chr11:5247974..5247996,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_6_at_HBB_5end | |||
|id=chr11:5247974..5247996,- | |||
|ontology_enrichment_celltype=CL:0000764!2.12e-10!2;CL:0000765!2.12e-10!2;CL:0000050!2.12e-10!2;CL:0000038!2.12e-10!2;CL:0000558!2.12e-10!2;CL:0000547!2.12e-10!2;CL:0000549!2.12e-10!2;CL:0000550!2.12e-10!2;CL:0000552!2.12e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.13e-27;2!CL:0000558;3.13e-27;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.13e-27,2;CL:0000765,3.13e-27,2;CL:0000050,3.13e-27,2;CL:0000038,3.13e-27,2;CL:0000558,3.13e-27,2;CL:0000547,3.13e-27,2;CL:0000549,3.13e-27,2;CL:0000550,3.13e-27,2;CL:0000552,3.13e-27,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.94e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.81e-35!15;UBERON:0000179!1.81e-35!15;UBERON:0000463!1.81e-35!15;UBERON:0007023!3.39e-20!115;UBERON:0002193!1.21e-07!112;UBERON:0002390!1.35e-07!102;UBERON:0003061!1.35e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.22e-71;15!UBERON:0000179;4.22e-71;15!UBERON:0000463;4.22e-71;15!UBERON:0002390;3.86e-30;32!UBERON:0002193;8.80e-17;42!UBERON:0002084;2.94e-14;1!UBERON:0002082;2.94e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.22e-71,15;UBERON:0000179,4.22e-71,15;UBERON:0000463,4.22e-71,15;UBERON:0007023,1.77e-15,114;UBERON:0002084,2.75e-14,1;UBERON:0002082,2.75e-14,1;UBERON:0010226,2.75e-14,1;UBERON:0004535,3.75e-11,109;UBERON:0001009,8.03e-11,112;UBERON:0002390,4.95e-10,98;UBERON:0003061,4.95e-10,98;UBERON:0002193,5.10e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1822537089427,18.5619170227679,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,52.7745513601456,56.5831533285358,75.7630758941636,16.914456057503,23.4476495659131,38.2599253603703,46.4427036024779,132.451904441143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,105.372560632654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.640724475406168,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p6@HBB | |||
}} |
Latest revision as of 07:35, 18 September 2015
Short description: | p6@HBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HBB_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 56bp_to_ENST00000475226_5end |
EntrezGene: | HBB |
HGNC: | 4827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.13e-27 | 2 |
erythroblast | 3.13e-27 | 2 |
megakaryocyte-erythroid progenitor cell | 3.13e-27 | 2 |
erythroid progenitor cell | 3.13e-27 | 2 |
reticulocyte | 3.13e-27 | 2 |
proerythroblast | 3.13e-27 | 2 |
basophilic erythroblast | 3.13e-27 | 2 |
polychromatophilic erythroblast | 3.13e-27 | 2 |
orthochromatic erythroblast | 3.13e-27 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.22e-71 | 15 |
haemolymphatic fluid | 4.22e-71 | 15 |
organism substance | 4.22e-71 | 15 |
adult organism | 1.77e-15 | 114 |
heart left ventricle | 2.75e-14 | 1 |
cardiac ventricle | 2.75e-14 | 1 |
future cardiac ventricle | 2.75e-14 | 1 |
cardiovascular system | 3.75e-11 | 109 |
circulatory system | 8.03e-11 | 112 |
hematopoietic system | 4.95e-10 | 98 |
blood island | 4.95e-10 | 98 |
hemolymphoid system | 5.10e-09 | 108 |