FFCP PHASE1:Hg19::chr11:507184..507269,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10074 | |||
|TSSclassifier=strong | |||
|UniProt=P13489,E9PMA9,E9PR82,E9PMN0,E9PIK5 | |||
|association_with_transcript=0bp_to_ENST00000354420,ENST00000397604,ENST00000524464,ENST00000524780,ENST00000525701,ENST00000528713,ENST00000529115,ENST00000531149,ENST00000533410_5end | |||
|cluster_id=chr11:507184..507269,- | |||
|coexpression_cluster_id=C1636 | |||
|description=CAGE_peak_1_at_RNH1_5end | |||
|id=chr11:507184..507269,- | |||
|ontology_enrichment_celltype=CL:0002371!2.83e-29!591;CL:0000144!5.05e-25!625;CL:0000055!1.42e-20!180;CL:0000548!3.03e-18!679;CL:0000004!3.03e-18!679;CL:0000255!3.03e-18!679;CL:0000222!1.18e-17!119;CL:0000012!1.49e-17!682;CL:0000183!3.11e-15!59;CL:0000680!1.83e-13!57;CL:0000056!1.83e-13!57;CL:0000355!1.83e-13!57;CL:0000187!6.55e-13!54;CL:0000220!1.87e-12!246;CL:0000192!1.95e-12!42;CL:0000514!1.95e-12!42;CL:0002321!9.91e-12!248;CL:0000723!1.12e-11!436;CL:0000057!1.19e-11!75;CL:0000048!1.20e-11!430;CL:0000359!4.05e-11!32;CL:0000393!6.74e-10!60;CL:0000211!6.74e-10!60;CL:0000034!9.66e-10!444;CL:0000003!1.10e-09!722;CL:0000063!2.28e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.59e-10;32!CL:0000192;1.91e-09;43!CL:0000134;8.03e-08;55!CL:0000187;1.64e-07;55!CL:0000349;6.96e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.56e-18,121;CL:0000680,1.09e-13,58;CL:0000056,1.09e-13,58;CL:0000355,1.09e-13,58;CL:0000187,3.91e-13,55;CL:0000192,1.18e-12,43;CL:0000514,1.18e-12,43;CL:0000723,1.63e-12,433;CL:0000048,1.73e-12,427;CL:0002321,3.92e-12,250;CL:0000057,1.32e-11,76;CL:0000359,4.05e-11,32;CL:0000034,1.70e-10,441;CL:0000393,4.10e-10,61;CL:0000211,4.10e-10,61;CL:0000349,7.00e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.91e-09;43!CL:0000355;1.23e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.60e-16!83;UBERON:0002329!2.60e-16!83;UBERON:0003077!2.60e-16!83;UBERON:0003059!2.60e-16!83;UBERON:0007282!2.60e-16!83;UBERON:0009618!2.60e-16!83;UBERON:0007285!2.60e-16!83;UBERON:0003081!4.04e-16!216;UBERON:0004290!1.44e-15!70;UBERON:0004872!1.80e-15!84;UBERON:0000926!3.11e-15!448;UBERON:0004120!3.11e-15!448;UBERON:0006603!3.11e-15!448;UBERON:0000486!3.64e-15!82;UBERON:0003914!2.09e-14!118;UBERON:0002049!4.14e-14!79;UBERON:0007798!4.14e-14!79;UBERON:0005256!1.31e-13!143;UBERON:0001637!1.38e-13!42;UBERON:0003509!1.38e-13!42;UBERON:0004572!1.38e-13!42;UBERON:0000055!1.63e-13!69;UBERON:0001981!2.41e-13!60;UBERON:0007500!2.41e-13!60;UBERON:0004537!2.41e-13!60;UBERON:0006965!2.41e-13!60;UBERON:0001134!2.46e-13!61;UBERON:0002036!2.46e-13!61;UBERON:0003082!2.46e-13!61;UBERON:0002204!4.85e-13!167;UBERON:0002385!6.96e-13!63;UBERON:0001015!6.96e-13!63;UBERON:0000383!6.96e-13!63;UBERON:0004573!2.05e-10!33;UBERON:0004571!2.05e-10!33;UBERON:0001009!2.42e-10!113;UBERON:0004535!7.50e-10!110;UBERON:0002100!3.06e-09!216;UBERON:0000490!7.04e-09!138;UBERON:0000468!8.44e-09!659;UBERON:0000467!9.65e-09!625;UBERON:0000480!1.14e-08!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.90e-10;42!UBERON:0003509;7.90e-10;42!UBERON:0004572;7.90e-10;42!UBERON:0004573;2.06e-09;33!UBERON:0004571;2.06e-09;33!UBERON:0007500;2.10e-08;56!UBERON:0001981;2.10e-08;56!UBERON:0004537;2.10e-08;56!UBERON:0003914;6.35e-08;74!UBERON:0000055;8.48e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.13e-20,315;UBERON:0004120,4.13e-20,315;UBERON:0006603,4.13e-20,315;UBERON:0007503,1.12e-18,78;UBERON:0002329,8.47e-16,71;UBERON:0003059,8.47e-16,71;UBERON:0007282,8.47e-16,71;UBERON:0004290,8.47e-16,71;UBERON:0009618,8.47e-16,71;UBERON:0007524,1.52e-15,73;UBERON:0004872,1.56e-15,83;UBERON:0003081,1.77e-15,203;UBERON:0000486,2.14e-15,83;UBERON:0003077,3.37e-15,72;UBERON:0007285,3.37e-15,72;UBERON:0002204,6.72e-15,167;UBERON:0003914,3.48e-14,117;UBERON:0002049,3.62e-14,78;UBERON:0007798,3.62e-14,78;UBERON:0001637,1.38e-13,42;UBERON:0003509,1.38e-13,42;UBERON:0004572,1.38e-13,42;UBERON:0000055,1.39e-13,68;UBERON:0001134,1.46e-13,62;UBERON:0002036,1.46e-13,62;UBERON:0003082,1.46e-13,62;UBERON:0007500,1.96e-13,59;UBERON:0001981,1.96e-13,59;UBERON:0004537,1.96e-13,59;UBERON:0006965,1.96e-13,59;UBERON:0002385,4.14e-13,64;UBERON:0001015,4.14e-13,64;UBERON:0000383,4.14e-13,64;UBERON:0000490,7.59e-11,148;UBERON:0005256,7.88e-11,122;UBERON:0004573,2.05e-10,33;UBERON:0004571,2.05e-10,33;UBERON:0001009,2.39e-10,112;UBERON:0003104,2.90e-10,160;UBERON:0009142,2.90e-10,160;UBERON:0004535,7.42e-10,109;UBERON:0002100,2.20e-08,199 | |||
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| |||
|short_description=p1@RNH1 | |||
}} |
Latest revision as of 07:11, 18 September 2015
Short description: | p1@RNH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNH1_5end |
Coexpression cluster: | C1636_Mesenchymal_Alveolar_Placental_Smooth_Fibroblast_Bronchial_Hair |
Association with transcript: | 0bp_to_ENST00000354420, ENST00000397604, ENST00000524464, ENST00000524780, ENST00000525701, ENST00000528713, ENST00000529115, ENST00000531149, ENST00000533410_5end |
EntrezGene: | RNH1 |
HGNC: | 10074 |
UniProt: | P13489E9PMA9E9PR82E9PMN0E9PIK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.56e-18 | 121 |
muscle precursor cell | 1.09e-13 | 58 |
myoblast | 1.09e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-13 | 58 |
muscle cell | 3.91e-13 | 55 |
smooth muscle cell | 1.18e-12 | 43 |
smooth muscle myoblast | 1.18e-12 | 43 |
somatic stem cell | 1.63e-12 | 433 |
multi fate stem cell | 1.73e-12 | 427 |
embryonic cell | 3.92e-12 | 250 |
fibroblast | 1.32e-11 | 76 |
vascular associated smooth muscle cell | 4.05e-11 | 32 |
stem cell | 1.70e-10 | 441 |
electrically responsive cell | 4.10e-10 | 61 |
electrically active cell | 4.10e-10 | 61 |
extraembryonic cell | 7.00e-07 | 19 |