FFCP PHASE1:Hg19::chr11:46342608..46342682,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-313bp_to_CU680777_5end | |||
|cluster_id=chr11:46342608..46342682,- | |||
|coexpression_cluster_id=C882 | |||
|description=CAGE_peak_1_at_CU680777_5end | |||
|id=chr11:46342608..46342682,- | |||
|ontology_enrichment_celltype=CL:0000055!2.14e-34!180;CL:0000057!9.56e-23!75;CL:0000183!3.07e-14!59;CL:0000680!1.16e-13!57;CL:0000056!1.16e-13!57;CL:0000355!1.16e-13!57;CL:0000187!2.84e-13!54;CL:0000393!5.23e-12!60;CL:0000211!5.23e-12!60;CL:0000192!1.31e-11!42;CL:0000514!1.31e-11!42;CL:0002620!5.87e-09!23;CL:0000048!1.64e-07!430;CL:0000359!2.54e-07!32;CL:0000723!7.40e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000134;7.64e-13;55!CL:0000723;1.54e-11;61!CL:0000048;1.73e-11;58!CL:0000057;7.99e-11;73!CL:0002320;5.06e-10;188!CL:0002620;1.77e-09;23!CL:0000034;1.83e-08;69!CL:0002334;4.59e-08;12!CL:0002570;3.46e-07;8!CL:0000187;5.87e-07;55!CL:0000499;6.43e-07;28!CL:0000349;7.43e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.95e-28,76;CL:0000048,6.94e-17,427;CL:0000723,6.20e-16,433;CL:0000034,1.01e-14,441;CL:0000680,1.85e-11,58;CL:0000056,1.85e-11,58;CL:0000355,1.85e-11,58;CL:0000187,2.42e-11,55;CL:0002320,6.91e-11,361;CL:0002620,2.32e-09,23;CL:0000192,2.98e-09,43;CL:0000514,2.98e-09,43;CL:0000134,4.07e-09,354;CL:0000393,4.50e-09,61;CL:0000211,4.50e-09,61;CL:0002334,4.73e-08,12;CL:0000219,2.07e-07,386;CL:0002570,3.84e-07,8;CL:0000499,6.40e-07,28;CL:0000349,7.91e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.71e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.56e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.23e-17!83;UBERON:0002329!9.23e-17!83;UBERON:0003077!9.23e-17!83;UBERON:0003059!9.23e-17!83;UBERON:0007282!9.23e-17!83;UBERON:0009618!9.23e-17!83;UBERON:0007285!9.23e-17!83;UBERON:0005256!1.15e-15!143;UBERON:0004290!3.01e-14!70;UBERON:0002385!4.18e-13!63;UBERON:0001015!4.18e-13!63;UBERON:0000383!4.18e-13!63;UBERON:0001134!7.47e-13!61;UBERON:0002036!7.47e-13!61;UBERON:0003082!7.47e-13!61;UBERON:0000486!6.63e-12!82;UBERON:0002100!6.43e-10!216;UBERON:0000475!6.78e-10!365;UBERON:0000481!8.87e-09!347;UBERON:0003104!1.07e-07!238;UBERON:0009142!1.07e-07!238;UBERON:0000490!1.40e-07!138;UBERON:0003102!2.51e-07!95;UBERON:0004872!3.74e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.38e-10;198!UBERON:0002204;1.65e-07;70!UBERON:0001013;3.03e-07;14!UBERON:0003104;5.38e-07;7!UBERON:0009142;5.38e-07;7!UBERON:0002385;6.13e-07;31!UBERON:0001015;6.13e-07;31!UBERON:0000383;6.13e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.59e-12,73;UBERON:0007503,3.28e-12,78;UBERON:0002329,4.80e-12,71;UBERON:0003059,4.80e-12,71;UBERON:0007282,4.80e-12,71;UBERON:0004290,4.80e-12,71;UBERON:0009618,4.80e-12,71;UBERON:0003077,1.12e-11,72;UBERON:0007285,1.12e-11,72;UBERON:0001134,4.12e-11,62;UBERON:0002036,4.12e-11,62;UBERON:0003082,4.12e-11,62;UBERON:0002385,4.80e-11,64;UBERON:0001015,4.80e-11,64;UBERON:0000383,4.80e-11,64;UBERON:0002384,5.67e-11,371;UBERON:0000486,9.49e-10,83;UBERON:0003104,1.19e-09,160;UBERON:0009142,1.19e-09,160;UBERON:0005256,1.78e-09,122;UBERON:0003102,3.78e-08,99;UBERON:0002199,1.69e-07,46;UBERON:0002416,1.69e-07,46;UBERON:0001013,4.09e-07,14;UBERON:0000490,7.03e-07,148 | |||
|phase1_expression=3.99692434395225,3.21150785836475,1.69145284915165,1.0007329835313,1.78784437770915,4.36169262050184,0,3.15859936713415,2.08948502559871,2.21160542851358,1.39560233594486,3.27662058195258,5.53910654279752,2.10402800032079,2.65117900582333,4.03395087871065,9.64311244838363,4.38186054232424,5.85519358548608,0.861847406537515,2.85600967741954,2.82109249330279,0,0.684372125364421,0.753255837568817,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,3.06870148424473,12.2889311810753,1.00267582127178,8.11140506180613,0,2.91980922181582,0.283604451492204,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0,0,0,0.33472061276467,0,0,0.24406205754817,0,1.62028389576352,0,0,0,0,0,0,0,0,0,6.95760732373446,3.41902381494365,1.45650098894541,6.02356903572509,4.965357350777,2.80338800071154,0,18.0067310344527,0.311211035399766,1.34710672069688,1.14423332179421,4.54072282934794,1.15235184896,3.98346434117454,1.24864030732128,0,3.88566569434683,1.05691048779388,0.971237666208789,0.561803226808994,2.04154171254893,1.71968044236475,2.47981874821837,4.75201142912821,7.17074094907815,0,7.18618141816238,2.18836948140286,1.25118519871964,1.6623846929051,6.14568669233173,6.12975591598039,2.55404700141215,4.42385514324082,8.61070251306537,8.96941033037983,6.35795703478686,6.00182192168805,8.45030739755199,5.15281080091258,6.32797311527405,4.89451363499672,9.06164147999147,5.04867548488229,4.32634523618807,6.7891343863901,13.4903645156313,8.86618464403234,7.29110546935097,0,0,0,0.731842236777572,0.132529768321485,0.348581828608555,0.725627385107593,0.252320850875628,0,3.12899064659632,18.0107462694008,1.38134921352481,3.25057549622385,2.88751792667834,0,0,0,0,0,0,0.269662616320329,0,0,0,4.20725321410337,5.7620361586396,2.94017422771084,0,0,0.590789906681404,0,1.22988438543114,3.60292401626904,0,0,0,0.370353780634118,3.9096996637239,5.19967392639789,4.3299402607582,1.85488647960123,1.17408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,1.56983518083505,2.1798003441664,1.1734125731352,3.61960804121778,21.4593867511129,7.607724773004,6.91439103120663,6.24044621468197,5.65856223376713,4.25547396069835,3.46348832720929,11.2952614989937,27.6737018749636,7.40916303102692,5.5375151329935,8.5294067698211,6.33561498346743,1.50719688529793,0,1.49959486773086,0,0,0,7.18874566474748,4.59447743336456,0,2.31650090668127,1.2328579353023,0.358121926479791,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,3.31267027641678,5.50187573165645,1.89885516589815,13.1021642764408,15.5233220253531,7.7274183366628,3.16281820480326,0,0,5.17365356462525,5.97803038681893,0.368738337083406,5.82120216936155,4.50342662164303,4.11772108573027,0,0,0,2.12189300012382,14.9791895559447,14.5147340798247,1.24053903909388,4.14347327877769,4.77122160536225,2.69092213436972,4.60536524160033,11.0989205589089,4.45254199334973,4.47208112027701,7.10246901252508,3.77784917663522,3.11552657510173,3.7187321107187,0.725156697549733,0.200506470303285,0.184161977871793,6.54442354538258,9.83292307236272,12.1945705912264,0,0.308061348417659,2.35304930753057,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,2.70946437543853,5.01689773854853,0,0.831076008928724,0,0.219259876645935,0,1.28225062558195,0.656029291399411,1.30151357865721,0.412164046590889,9.15694648183434,8.2509499920588,0,0,4.82051789532479,5.99358453411156,0.770243085573222,1.84204409671355,1.10269257987624,2.14840489736547,2.32026710262766,1.44885266607372,13.6219014539508,0,0,0,0,12.0859842817294,19.5183655034997,0.6970372701606,6.77673876387395,0.532306030317022,1.73986598415015,1.29726953372744,0,0.744316738719335,0.949138274156178,4.00323407240032,5.62975140884935,3.85145089230528,0.318203247925937,3.92474320099615,1.43897966066652,4.94166653524899,2.94531005864216,0.404364963146632,0,1.26377536871694,7.80213982543345,7.55511817856982,0,13.5134912293906,11.312434556297,3.39024349860728,0.551365343546124,5.30751180192976,0.876901770507525,8.68163301400032,3.9353685122798,1.01455188481352,0.92947049429925,0.845086807596724,7.88762437122283,6.09144054281351,0.35667105148125,2.12856638442359,5.2776908824416,6.25660296623814,4.17420491142287,5.94889024416471,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.796991953004279,0,0,0.920418142519393,0.984678443688556,2.48831670129446,0.0898683511473268,0.537063524026827,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0.524759999977174,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.461701551022782,2.05095700524602,0,0,0.434589487688032,0,1.28236630762607,0,0,0,0.166211681900156,0.676786981851542,0.588187602953219,0.671286347903371,0,0,0,0,1.27217764290547,0,1.99052386215701,0.176915129006678,0.611030144933625,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0.485560759068186,0,6.04953580243319,0.30607276163049,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0.51595809741485,0.0967563312890851,0.292357268344742,0.0821154570532092,0,0.0882561266915003,1.35588444468319,1.64450309576101,0,0.443175571691151,0.195551382734803,3.76746455182208,0.640358984218058,0,2.16135625731159,0,0,0.14405479798815,0.621262677827163,0,1.22313785466253,1.67364554099733,0.305994652908965,2.02265412931063,0,0,0,2.14882720709979,0,0.837847203816763,0.229160424011684,0,1.59743200399193,6.86761677018513,0,1.20930250476107,3.96329871896644,0,0,0,0,0.590564889088493,0,0,0.272406812223151,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,0.157611414598396,0.629455057619977,1.90080605734932,0.179287339332845,0,2.85878130549347,1.32418394073086,0.5085370753095,1.62899880526114,5.18532894720761,3.26587360109409,0,0.246277562248017,6.13396878427518,0.339936274560377,0.439656701034247,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0,0.0620964029413835,0,0,0,0,2.58792401667989,0,0,4.92540849526684,11.451952182514,4.43844689202091,3.21985108967651,3.77351852628863,2.66943366478961,2.97492088916001,4.38569678913393,4.04136721515229,1.77426179987561,4.30101271341996,1.34940933649081,3.41578505127771,4.56176828624941,5.84851772027589,1.5652351854352,5.40927392389986,1.90402606084398,5.69619026486526,4.36436782086143,3.22231671127465,2.78420255927096,4.77715066438339,4.80033317595784,4.12074846219351,3.03074539889327,0,1.15571898244382,0,0,1.81364740409818,7.64024165268652,4.16052397660995,1.25362188757041,0,2.63140859494449,2.65033718918822,0,0.168942440653073,0,0,2.43087964941906,0,0,0,0.490696182767533,1.63804924423206,1.2288645437686,0,0,0.106691729694141,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0.123935764259002,0,3.4980478571876,0,0,13.7543618039367,6.7374005017704,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,4.57658514560601,0,8.95122999523236,0.601682626794058,5.042626717588,12.5042241797295,0,0,0,0.135075169236789,0,0,0.380494861163441,0,0,0.496211178389294,0,0,0,0,0,0,0.79832133146375,0,1.54339208493677,0.135939465953663,0.131545547125698,0,0.444925607568277,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0.813689977576877,0.347716544605159,0.801711364730253,0,0,0,5.16272830584333,0.118332000730565,0,0.423387050190929,0,0,0.955538938977433,0,0.098150233615243,0.853425474875886,0,0,1.1598144313382,0,0,0,0.475680363110274,0,0,0.150962843566674,0.385870790539723,2.62271472604749,2.35158648180761,2.20633489578515,0.471353094203252,0,0,0,3.90832363781979,0.0939839179798536,0.257831551894309,0.199882311849858,0,0,0,1.46067277649303,0.458729283404541,0.143339583151451,0.157771562193185,0.407948941145488,0.436350690340377,1.0580536810308,14.5078057085033,8.31916131536553,10.8156640530947,0.630832124175395,0.546327859818478,1.14028650910293,0.61193297845189,0.26721740526556,0.551369397209069,0.752122617877125,0.151557396436479,0.535928260312357,0.829169439458779,0.103432995861895,0.213233981900981,0.714193294391221,0.0645889098360061,0.0620747142958579,2.4669009767735,0.0636471582781649,0.404234377916439,0.217716747896961,2.39563310759697,0.606168477131288,1.00411087549747,0.665320713092027,0.0814032686109745,0.320182037633146,0,0.179650404213174,9.38563769613817,1.22241444182866,0.813792356631477,0,0.201273793591026,0.641136984606466 | |||
|short_description=p1@CU680777 | |||
}} |
Latest revision as of 22:25, 23 July 2015
Short description: | p1@CU680777 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU680777_5end |
Coexpression cluster: | C882_Olfactory_Mesenchymal_Smooth_tenocyte_Osteoblast_Prostate_Fibroblast |
Association with transcript: | -313bp_to_CU680777_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.95e-28 | 76 |
multi fate stem cell | 6.94e-17 | 427 |
somatic stem cell | 6.20e-16 | 433 |
stem cell | 1.01e-14 | 441 |
muscle precursor cell | 1.85e-11 | 58 |
myoblast | 1.85e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-11 | 58 |
muscle cell | 2.42e-11 | 55 |
connective tissue cell | 6.91e-11 | 361 |
skin fibroblast | 2.32e-09 | 23 |
smooth muscle cell | 2.98e-09 | 43 |
smooth muscle myoblast | 2.98e-09 | 43 |
mesenchymal cell | 4.07e-09 | 354 |
electrically responsive cell | 4.50e-09 | 61 |
electrically active cell | 4.50e-09 | 61 |
preadipocyte | 4.73e-08 | 12 |
motile cell | 2.07e-07 | 386 |
mesenchymal stem cell of adipose | 3.84e-07 | 8 |
stromal cell | 6.40e-07 | 28 |
extraembryonic cell | 7.91e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.59e-12 | 73 |
epithelial vesicle | 3.28e-12 | 78 |
somite | 4.80e-12 | 71 |
presomitic mesoderm | 4.80e-12 | 71 |
presumptive segmental plate | 4.80e-12 | 71 |
dermomyotome | 4.80e-12 | 71 |
trunk paraxial mesoderm | 4.80e-12 | 71 |
paraxial mesoderm | 1.12e-11 | 72 |
presumptive paraxial mesoderm | 1.12e-11 | 72 |
skeletal muscle tissue | 4.12e-11 | 62 |
striated muscle tissue | 4.12e-11 | 62 |
myotome | 4.12e-11 | 62 |
muscle tissue | 4.80e-11 | 64 |
musculature | 4.80e-11 | 64 |
musculature of body | 4.80e-11 | 64 |
connective tissue | 5.67e-11 | 371 |
multilaminar epithelium | 9.49e-10 | 83 |
mesenchyme | 1.19e-09 | 160 |
entire embryonic mesenchyme | 1.19e-09 | 160 |
trunk mesenchyme | 1.78e-09 | 122 |
surface structure | 3.78e-08 | 99 |
integument | 1.69e-07 | 46 |
integumental system | 1.69e-07 | 46 |
adipose tissue | 4.09e-07 | 14 |
unilaminar epithelium | 7.03e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.56e-07 | 14 |