FFCP PHASE1:Hg19::chr11:2159947..2159948,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P01344 | |||
|association_with_transcript=255bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|cluster_id=chr11:2159947..2159948,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_71_at_IGF2_5end | |||
|id=chr11:2159947..2159948,- | |||
|ontology_enrichment_celltype=CL:0000349!4.60e-14!3;CL:0002577!4.60e-14!3;CL:0002575!5.93e-10!2;CL:0002541!6.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.38e-33;2!CL:0002577;5.15e-23;3!CL:0000349;6.49e-22;19!CL:0000669;2.38e-17;4!CL:0002536;1.57e-09;2!CL:0002541;5.80e-07;3!CL:0002231;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.17e-33,2;CL:0002577,4.61e-23,3;CL:0000349,7.40e-22,19;CL:0000669,2.19e-17,4;CL:0002536,2.02e-09,2;CL:0002541,5.80e-07,3;CL:0002231,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.18e-24!14;UBERON:0000158!4.18e-24!14;UBERON:0003124!1.87e-22!7;UBERON:0001987!4.78e-18!4;UBERON:0004340!4.78e-18!4;UBERON:0000478!2.45e-13!24;UBERON:0001255!1.30e-08!2;UBERON:0001556!1.30e-08!2;UBERON:0004923!6.00e-07!57;UBERON:0000476!6.29e-07!3;UBERON:0000920!6.29e-07!3;UBERON:0000162!6.54e-07!14;UBERON:0001353!6.54e-07!14;UBERON:0000163!6.54e-07!14;UBERON:0006866!6.54e-07!14;UBERON:0000164!6.54e-07!14;UBERON:0000931!6.54e-07!14;UBERON:0001723!8.60e-07!3;UBERON:0001033!8.60e-07!3;UBERON:0010056!8.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.57e-17;4!UBERON:0000478;2.22e-17;24!UBERON:0005631;1.17e-15;10!UBERON:0000158;1.17e-15;10!UBERON:0000305;1.94e-10;7!UBERON:0003124;5.80e-07;3!UBERON:0000920;5.80e-07;3!UBERON:0001723;6.88e-07;3!UBERON:0001033;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.37e-29,14;UBERON:0000158,1.37e-29,14;UBERON:0003124,4.28e-22,7;UBERON:0001987,1.45e-17,4;UBERON:0004340,1.45e-17,4;UBERON:0000478,2.46e-17,24;UBERON:0000305,2.35e-10,7;UBERON:0004871,3.55e-09,8;UBERON:0000920,5.80e-07,3;UBERON:0001723,6.50e-07,3;UBERON:0001033,6.50e-07,3;UBERON:0010056,6.50e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,1.37060810223918,1.71571711905428,0,0,0,0.909382714338778,1.66435439510497,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0,0,0.957003479195758,0,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.247247575143499,0.471824806979294,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,3.4794432940146,0,0,0.596852325484105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.404234377916439,0.435433495793923,2.73786640868225,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |||
|short_description=p71@IGF2 | |||
}} |
Latest revision as of 08:29, 17 September 2015
Short description: | p71@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_71_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 255bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.17e-33 | 2 |
placental epithelial cell | 4.61e-23 | 3 |
extraembryonic cell | 7.40e-22 | 19 |
pericyte cell | 2.19e-17 | 4 |
amniotic epithelial cell | 2.02e-09 | 2 |
chorionic membrane mesenchymal stem cell | 5.80e-07 | 3 |
epithelial cell of prostate | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.37e-29 | 14 |
membranous layer | 1.37e-29 | 14 |
chorion | 4.28e-22 | 7 |
placenta | 1.45e-17 | 4 |
allantois | 1.45e-17 | 4 |
extraembryonic structure | 2.46e-17 | 24 |
amnion | 2.35e-10 | 7 |
somatic layer of lateral plate mesoderm | 3.55e-09 | 8 |
egg chorion | 5.80e-07 | 3 |
tongue | 6.50e-07 | 3 |
gustatory system | 6.50e-07 | 3 |
future tongue | 6.50e-07 | 3 |