FFCP PHASE1:Hg19::chr11:121960926..121960929,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:121960926..121960929,- | |||
|description=CAGE_peak_at_chr11:121960926..121960929,- | |||
|id=chr11:121960926..121960929,- | |||
|ontology_enrichment_celltype=CL:0000055!5.45e-30!180;CL:0000057!6.08e-18!75;CL:0000680!2.22e-13!57;CL:0000056!2.22e-13!57;CL:0000355!2.22e-13!57;CL:0000187!4.32e-12!54;CL:0000393!8.94e-12!60;CL:0000211!8.94e-12!60;CL:0000183!1.21e-10!59;CL:0002620!1.41e-09!23;CL:0000192!9.57e-09!42;CL:0000514!9.57e-09!42;CL:0000359!4.98e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.99e-10;23!CL:0000057;2.31e-09;73!CL:0000359;4.45e-08;32!CL:0000393;5.40e-08;61!CL:0000211;5.40e-08;61!CL:0000187;5.67e-08;55!CL:0000192;2.89e-07;43!CL:0002334;9.19e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.50e-21,76;CL:0000680,3.25e-15,58;CL:0000056,3.25e-15,58;CL:0000355,3.25e-15,58;CL:0000393,8.19e-14,61;CL:0000211,8.19e-14,61;CL:0000187,1.03e-13,55;CL:0002620,1.82e-10,23;CL:0000192,8.28e-10,43;CL:0000514,8.28e-10,43;CL:0000359,3.88e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000355;7.93e-09;58!CL:0000514;2.89e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.31e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.71e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.48e-21!365;UBERON:0000914!1.43e-16!83;UBERON:0002329!1.43e-16!83;UBERON:0003077!1.43e-16!83;UBERON:0003059!1.43e-16!83;UBERON:0007282!1.43e-16!83;UBERON:0009618!1.43e-16!83;UBERON:0007285!1.43e-16!83;UBERON:0000481!2.41e-15!347;UBERON:0004290!1.09e-13!70;UBERON:0000486!1.79e-12!82;UBERON:0002385!1.96e-12!63;UBERON:0001015!1.96e-12!63;UBERON:0000383!1.96e-12!63;UBERON:0001134!2.67e-12!61;UBERON:0002036!2.67e-12!61;UBERON:0003082!2.67e-12!61;UBERON:0000119!2.30e-11!312;UBERON:0000468!2.62e-11!659;UBERON:0000483!4.24e-11!309;UBERON:0004121!1.86e-09!169;UBERON:0005256!1.94e-09!143;UBERON:0000033!5.51e-09!123;UBERON:0000924!6.35e-09!173;UBERON:0006601!6.35e-09!173;UBERON:0000467!9.12e-09!625;UBERON:0000477!9.26e-09!286;UBERON:0000073!1.14e-08!94;UBERON:0001016!1.14e-08!94;UBERON:0000480!1.37e-08!626;UBERON:0000153!1.41e-08!129;UBERON:0007811!1.41e-08!129;UBERON:0005743!2.09e-08!86;UBERON:0003102!2.66e-08!95;UBERON:0001017!6.79e-08!82;UBERON:0002100!1.09e-07!216;UBERON:0003075!1.12e-07!86;UBERON:0007284!1.12e-07!86;UBERON:0002616!1.32e-07!59;UBERON:0002050!1.60e-07!605;UBERON:0005423!1.60e-07!605;UBERON:0000922!1.99e-07!612;UBERON:0000923!2.78e-07!604;UBERON:0005291!2.78e-07!604;UBERON:0006598!2.78e-07!604;UBERON:0002532!2.78e-07!604;UBERON:0000955!5.11e-07!69;UBERON:0006238!5.11e-07!69;UBERON:0001049!5.35e-07!57;UBERON:0005068!5.35e-07!57;UBERON:0006241!5.35e-07!57;UBERON:0007135!5.35e-07!57;UBERON:0002346!5.52e-07!90;UBERON:0002199!6.22e-07!45;UBERON:0002416!6.22e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.09e-07;31!UBERON:0001015;6.09e-07;31!UBERON:0000383;6.09e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.86e-17,73;UBERON:0003077,1.56e-16,72;UBERON:0007285,1.56e-16,72;UBERON:0002329,4.57e-16,71;UBERON:0003059,4.57e-16,71;UBERON:0007282,4.57e-16,71;UBERON:0004290,4.57e-16,71;UBERON:0009618,4.57e-16,71;UBERON:0001134,2.79e-14,62;UBERON:0002036,2.79e-14,62;UBERON:0003082,2.79e-14,62;UBERON:0000486,2.98e-14,83;UBERON:0002385,4.46e-14,64;UBERON:0001015,4.46e-14,64;UBERON:0000383,4.46e-14,64;UBERON:0010314,4.23e-13,132;UBERON:0007503,8.80e-13,78;UBERON:0003104,4.29e-10,160;UBERON:0009142,4.29e-10,160;UBERON:0005256,1.38e-09,122;UBERON:0000483,1.19e-08,306;UBERON:0000119,1.51e-08,309;UBERON:0002199,9.62e-08,46;UBERON:0002416,9.62e-08,46;UBERON:0002097,1.21e-07,41;UBERON:0003075,2.63e-07,82;UBERON:0007284,2.63e-07,82;UBERON:0003102,4.71e-07,99;UBERON:0004121,5.12e-07,171;UBERON:0000924,5.12e-07,171;UBERON:0006601,5.12e-07,171 | |||
|phase1_expression=2.90685406832891,6.63711624062048,6.3429481843187,4.00293193412522,5.81049422755474,4.36169262050184,0,1.26343974685366,0.783556884599516,0.491467873003018,0,0,0.527533956456907,14.6044296492855,3.64537113300707,4.70627602516243,2.41077811209591,5.11217063271161,3.90346239032406,1.72369481307503,0.816002764977012,0.940364164434263,10.018259549587,2.87436292653057,1.25542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,3.35350429851818,2.17366355134002,2.53007406669196,4.01070328508712,21.0027452493194,3.1811437882044,7.78615792484217,5.10488012685966,5.98669373148923,3.51339142772504,0.523916301990851,0,0,0,0,0,0,0,0,0.993812036833525,0,0,0,0.838998872419812,1.10047216776027,0.626984899610432,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.625098097988558,0.673588117878509,0.337834441449967,0,0,0,0,0,0,3.97577561356255,5.06522046658319,2.64818361626438,1.72101972449288,1.77334191099179,1.68203280042692,0,1.72667283892012,2.8008993185979,1.34710672069688,2.28846664358842,2.8757911252537,7.49028701823999,1.17160715916898,2.49728061464256,1.1409436430889,8.21967743034906,2.93586246609412,2.91371299862637,3.51127016755621,6.1246251376468,5.40470996171779,2.47981874821837,10.6920257155385,16.3196173323848,0,0,5.89176398839232,2.12701483782339,0.831192346452549,7.02364193409341,14.0984386067549,9.16452159330241,1.58805056424029,6.99619579186562,9.39652510801697,16.9545520927649,3.30100205692843,6.69841440049853,3.60696756063881,3.35010341396862,6.91982962189192,5.35903528386592,4.03894038790583,10.9539379384336,8.08230284094059,4.9701342952326,7.45565526884538,4.40857540007268,0.57978255948989,0.545492241181669,1.72082757233402,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,7.71889125831462,0,13.9310378409594,5.77503585335668,0.354920400119532,0.168584690078102,0.241011029883482,0,0,0.474541238222193,0.269662616320329,0,0,0,0,3.2925920906512,1.47008711385542,0,0,0,0,0,1.54411029268673,0.219500570817251,0,0.402115889646523,4.9997760385606,0.977424915930974,0,2.88662684050547,1.39116485970092,1.40890433082986,0.144366447761074,0,0,0,0,0,0,0,0,0.671928512795438,0.425325291727159,3.58234090811393,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.672786506072164,0.87192013766656,3.44689943358465,4.52451005152222,0,1.690605505112,3.72313363218819,0,0.771622122786426,2.83698264046557,1.5985330740966,7.72081165753997,1.08524321078289,0.823240336780769,5.86325131728723,11.3725423597615,3.95975936466715,5.72734816413214,0.871533458600294,1.79951384127703,0,0,0,4.31324739884849,3.44585807502342,1.42636905040718,7.81819056004928,8.21905290201534,3.40215830155802,0,0,0,0,0.508189248444927,1.30139853857622,8.50617694055465,8.87836206272048,6.37938751653163,0,0,0,9.69262784581205,5.00170521059677,7.86668568729233,7.48695101510906,3.03329280955175,10.2506569772058,2.57711112983969,0.902838299183157,0,4.1389228517002,5.31380478828349,0.921845842708516,9.90473204936145,0.195801157462741,2.05886054286514,0,0,0,0,0,1.20956117331872,2.72918588600655,9.05425642399569,10.6650835884568,7.04765320906355,4.60536524160033,9.00781958404202,0,10.1778397909753,4.08391968220192,4.02423064467665,3.11552657510173,12.5507208736756,0,1.40354529212299,0.0920809889358963,1.7222167224691,5.82691737621495,8.39196255740314,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,1.79515087581472,1.64007322849853,2.92840555197873,2.06082023295445,0,0,0,1.95018073810956,14.4615536859744,7.73365746336976,4.00526404498075,2.76306614507033,4.9621166094431,7.19715640617433,3.0453505721988,3.06815858697963,1.33548053470106,0.826424576804891,0,0.765676274967505,0,2.32422774648643,1.25924938732256,2.0911118104818,6.16067160352178,1.06461206063404,0,2.03856641014312,2.28999818787186,4.09374206295634,1.2655176988749,3.43134349062885,0.767693373934002,4.70732886837312,2.54562598340749,1.56989728039846,5.21630126991613,1.92175920815238,1.53156123049392,1.01091240786658,1.58510321173008,2.10629228119491,0.48763373908959,10.9671070334078,3.16950440270266,2.18399858252777,2.54529777516683,2.26016233240486,2.75682671773062,2.65375590096488,2.63070531152258,2.89387767133344,8.52663177660623,2.02910376962704,3.40805847909725,2.81695602532241,5.59304273595801,7.95817232206281,1.78335525740625,5.32141596105897,8.44430541190656,3.29294892959902,0,1.39973888097993,0.577332676353072,0,0,2.2594512186427,0,0,0,3.90529780351831,0,0,0.569647187174163,0,0,0,0,0,0,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.852408440419239,0.23874448473769,0.593929361665277,0.921482106297696,0.994147647766298,3.65740482667333,4.22973079087042,0,2.53350489753592,3.586463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| |||
|short_description=p@chr11:121960926..121960929,- | |||
}} |
Latest revision as of 19:15, 23 July 2015
Short description: | p@chr11:121960926..121960929, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121960926..121960929, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.50e-21 | 76 |
muscle precursor cell | 3.25e-15 | 58 |
myoblast | 3.25e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.25e-15 | 58 |
electrically responsive cell | 8.19e-14 | 61 |
electrically active cell | 8.19e-14 | 61 |
muscle cell | 1.03e-13 | 55 |
skin fibroblast | 1.82e-10 | 23 |
smooth muscle cell | 8.28e-10 | 43 |
smooth muscle myoblast | 8.28e-10 | 43 |
vascular associated smooth muscle cell | 3.88e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 5.86e-17 | 73 |
paraxial mesoderm | 1.56e-16 | 72 |
presumptive paraxial mesoderm | 1.56e-16 | 72 |
somite | 4.57e-16 | 71 |
presomitic mesoderm | 4.57e-16 | 71 |
presumptive segmental plate | 4.57e-16 | 71 |
dermomyotome | 4.57e-16 | 71 |
trunk paraxial mesoderm | 4.57e-16 | 71 |
skeletal muscle tissue | 2.79e-14 | 62 |
striated muscle tissue | 2.79e-14 | 62 |
myotome | 2.79e-14 | 62 |
multilaminar epithelium | 2.98e-14 | 83 |
muscle tissue | 4.46e-14 | 64 |
musculature | 4.46e-14 | 64 |
musculature of body | 4.46e-14 | 64 |
structure with developmental contribution from neural crest | 4.23e-13 | 132 |
epithelial vesicle | 8.80e-13 | 78 |
mesenchyme | 4.29e-10 | 160 |
entire embryonic mesenchyme | 4.29e-10 | 160 |
trunk mesenchyme | 1.38e-09 | 122 |
epithelium | 1.19e-08 | 306 |
cell layer | 1.51e-08 | 309 |
integument | 9.62e-08 | 46 |
integumental system | 9.62e-08 | 46 |
skin of body | 1.21e-07 | 41 |
neural plate | 2.63e-07 | 82 |
presumptive neural plate | 2.63e-07 | 82 |
surface structure | 4.71e-07 | 99 |
ectoderm-derived structure | 5.12e-07 | 171 |
ectoderm | 5.12e-07 | 171 |
presumptive ectoderm | 5.12e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.71e-07 | 14 |