FFCP PHASE1:Hg19::chr11:121896661..121896676,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:121896661..121896676,- | |||
|description=CAGE_peak_at_chr11:121896661..121896676,- | |||
|id=chr11:121896661..121896676,- | |||
|ontology_enrichment_celltype=CL:0000188!2.29e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002561;1.44e-12;2!CL:0002573;1.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.44e-12,2;CL:0002573,1.58e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.11e-17;3!UBERON:0003057;2.11e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;4.30e-07;1!DOID:0070004;4.30e-07;1!DOID:6193;7.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.18e-07,1;DOID:0070004,4.18e-07,1;DOID:6193,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.84e-12!57;UBERON:0005068!2.84e-12!57;UBERON:0006241!2.84e-12!57;UBERON:0007135!2.84e-12!57;UBERON:0003076!7.52e-12!15;UBERON:0003057!7.52e-12!15;UBERON:0002346!1.52e-10!90;UBERON:0002298!1.93e-10!8;UBERON:0007023!3.08e-10!115;UBERON:0003075!9.92e-09!86;UBERON:0007284!9.92e-09!86;UBERON:0000073!1.21e-08!94;UBERON:0001016!1.21e-08!94;UBERON:0001017!1.89e-08!82;UBERON:0000924!2.37e-08!173;UBERON:0006601!2.37e-08!173;UBERON:0002616!2.92e-08!59;UBERON:0005743!1.00e-07!86;UBERON:0004733!1.03e-07!12;UBERON:0002028!1.03e-07!12;UBERON:0007277!1.03e-07!12;UBERON:0004121!4.81e-07!169;UBERON:0004732!5.42e-07!13;UBERON:0000955!9.21e-07!69;UBERON:0006238!9.21e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.11e-17;3!UBERON:0005174;2.11e-17;3!UBERON:0001137;2.11e-17;3!UBERON:0002298;8.95e-15;6!UBERON:0005933;1.44e-12;2!UBERON:0005942;1.44e-12;2!UBERON:0005932;1.44e-12;2!UBERON:0002148;2.39e-12;2!UBERON:0006331;2.39e-12;2!UBERON:0009662;2.39e-12;2!UBERON:0000988;1.64e-08;3!UBERON:0001896;6.05e-08;3!UBERON:0005290;6.05e-08;3!UBERON:0004733;1.93e-07;12!UBERON:0002028;1.93e-07;12!UBERON:0004732;7.15e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.50e-17,3;UBERON:0005174,2.50e-17,3;UBERON:0001137,2.50e-17,3;UBERON:0003076,4.33e-17,15;UBERON:0003057,4.33e-17,15;UBERON:0002298,9.30e-15,6;UBERON:0005933,1.44e-12,2;UBERON:0005942,1.44e-12,2;UBERON:0005932,1.44e-12,2;UBERON:0002148,2.84e-12,2;UBERON:0006331,2.84e-12,2;UBERON:0009662,2.84e-12,2;UBERON:0004121,2.29e-10,171;UBERON:0000924,2.29e-10,171;UBERON:0006601,2.29e-10,171;UBERON:0000988,1.83e-08,3;UBERON:0001896,5.64e-08,3;UBERON:0005290,5.64e-08,3;UBERON:0010096,5.64e-08,3;UBERON:0004733,1.97e-07,12;UBERON:0002028,1.97e-07,12;UBERON:0007277,1.97e-07,12;UBERON:0004732,7.27e-07,13;UBERON:0006834,9.79e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.971237666208789,0.280901613404497,1.02077085627447,0.122834317311768,1.75653827998801,0,0,0,0,0,0,1.10825646193673,0,0,0,0,2.51145489964407,0,0,0,0,1.03056216018252,0.558350568994769,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,6.50115099244771,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0.551346289938122,0.107420244868274,0.145016693914229,0.340906509664404,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22849920267187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,3.38581137416707,0.113942055847001,0,0,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,2.23581842213102,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0.253243183823515,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.76205998859206,0,0,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.314727528809989,0,0,0,0,0,7.119519054333,0,0,0.653174720218818,0,0,0,0.113312091520126,0,0,2.19781025814636,6.08269968016374,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,1.72022758707021,0.332787154610557,1.05563885000352,0,0,0,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,1.59238355479446,10.0006941165788,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848863961771,0,0,0,0,5.68309432880692,0,0,0,0,0,0,2.35898912783845,0,0.169732529954025,11.4790456854909,1.98297222814403,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0.883606528698812,0.263091094251396,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,10.2576380658522,0,0,0,0,0,4.14162002556979,4.26067023795788,0.846774100381858,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,0,0,0,0,0.245148321753905,0,2.35570160537934,4.45569600490629,2.113278637917,0,0,0,0,0,0,0,0,0,1.29005624836306,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,2.48750831837634,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3874554964103,0,0.0898252021065869,0,1.95586310692586,0,0,0,0 | |||
|short_description=p@chr11:121896661..121896676,- | |||
}} |
Latest revision as of 19:15, 23 July 2015
Short description: | p@chr11:121896661..121896676, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121896661..121896676, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.44e-12 | 2 |
Schwann cell | 1.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.50e-17 | 3 |
dorsal region element | 2.50e-17 | 3 |
dorsum | 2.50e-17 | 3 |
posterior neural tube | 4.33e-17 | 15 |
chordal neural plate | 4.33e-17 | 15 |
brainstem | 9.30e-15 | 6 |
hair root sheath | 1.44e-12 | 2 |
hair outer root sheath | 1.44e-12 | 2 |
bulb of hair follicle | 1.44e-12 | 2 |
locus ceruleus | 2.84e-12 | 2 |
brainstem nucleus | 2.84e-12 | 2 |
hindbrain nucleus | 2.84e-12 | 2 |
ectoderm-derived structure | 2.29e-10 | 171 |
ectoderm | 2.29e-10 | 171 |
presumptive ectoderm | 2.29e-10 | 171 |
pons | 1.83e-08 | 3 |
medulla oblongata | 5.64e-08 | 3 |
myelencephalon | 5.64e-08 | 3 |
future myelencephalon | 5.64e-08 | 3 |
segmental subdivision of hindbrain | 1.97e-07 | 12 |
hindbrain | 1.97e-07 | 12 |
presumptive hindbrain | 1.97e-07 | 12 |
segmental subdivision of nervous system | 7.27e-07 | 13 |
uterus or analog | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.18e-07 | 1 |
myeloma | 4.18e-07 | 1 |
epithelioid sarcoma | 7.82e-07 | 1 |