FFCP PHASE1:Hg19::chr11:116700720..116700741,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:116700720..116700741,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr11:116700720..116700741,+ | |||
|id=chr11:116700720..116700741,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.70e-20!12;CL:0000417!6.70e-20!12;CL:0000668!6.70e-20!12;CL:0000414!6.70e-20!12;CL:0000412!6.70e-20!12;CL:0000182!6.70e-20!12;CL:0002563!1.86e-10!4;CL:0000223!2.31e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.77e-09;12!CL:0002563;1.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.77e-09,12;CL:0002563,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.83e-10;11!UBERON:0009497;1.22e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.46e-24!19;UBERON:0006925!3.46e-24!19;UBERON:0008836!3.46e-24!19;UBERON:0008835!8.38e-21!22;UBERON:0003894!8.38e-21!22;UBERON:0009854!7.18e-20!23;UBERON:0003929!1.14e-19!54;UBERON:0007499!3.15e-18!25;UBERON:0009497!3.15e-18!25;UBERON:0000015!3.15e-18!25;UBERON:0002423!3.15e-18!25;UBERON:0006235!3.15e-18!25;UBERON:0004161!3.15e-18!25;UBERON:0005057!1.68e-17!26;UBERON:0009856!1.68e-17!26;UBERON:0002368!1.48e-16!35;UBERON:0002365!1.44e-14!31;UBERON:0002330!1.44e-14!31;UBERON:0000949!1.15e-12!45;UBERON:0005911!2.20e-12!82;UBERON:0002530!6.86e-12!59;UBERON:0001242!1.86e-10!4;UBERON:0001262!1.86e-10!4;UBERON:0004786!1.86e-10!4;UBERON:0004808!1.86e-10!4;UBERON:0001277!1.86e-10!4;UBERON:0004921!2.47e-10!129;UBERON:0004185!2.47e-10!129;UBERON:0001007!1.05e-09!155;UBERON:0001555!1.05e-09!155;UBERON:0007026!1.05e-09!155;UBERON:0004119!1.03e-08!169;UBERON:0000925!1.03e-08!169;UBERON:0006595!1.03e-08!169;UBERON:0003350!1.54e-08!5;UBERON:0000160!2.29e-08!27;UBERON:0005172!6.79e-08!55;UBERON:0005173!6.79e-08!55;UBERON:0002417!4.81e-07!61;UBERON:0000916!4.81e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-21;19!UBERON:0006925;2.32e-21;19!UBERON:0002423;2.29e-16;25!UBERON:0002365;3.63e-13;31!UBERON:0002330;3.63e-13;31!UBERON:0002368;4.28e-11;33!UBERON:0000949;4.39e-08;43!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-21,19;UBERON:0006925,2.32e-21,19;UBERON:0008836,2.32e-21,19;UBERON:0008835,1.59e-18,22;UBERON:0003894,1.59e-18,22;UBERON:0009854,9.62e-18,23;UBERON:0007499,2.29e-16,25;UBERON:0009497,2.29e-16,25;UBERON:0000015,2.29e-16,25;UBERON:0002423,2.29e-16,25;UBERON:0006235,2.29e-16,25;UBERON:0004161,2.29e-16,25;UBERON:0009856,9.32e-16,26;UBERON:0002365,2.70e-13,31;UBERON:0002330,2.70e-13,31;UBERON:0002368,7.91e-12,35;UBERON:0003929,9.64e-12,54;UBERON:0000949,2.71e-09,45;UBERON:0005172,8.31e-08,54;UBERON:0005173,8.31e-08,54;UBERON:0005911,8.43e-08,82;UBERON:0001242,1.92e-07,4;UBERON:0001262,1.92e-07,4;UBERON:0004786,1.92e-07,4;UBERON:0004808,1.92e-07,4;UBERON:0001277,1.92e-07,4;UBERON:0002530,3.56e-07,59;UBERON:0002417,4.63e-07,60;UBERON:0000916,4.63e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0834566161479,0,2.95394953340702,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38854272215878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06078505825844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.412079291905832,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0948800688425,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.848915739187391,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:116700720..116700741,+ | |||
}} |
Latest revision as of 18:28, 23 July 2015
Short description: | p@chr11:116700720..116700741, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116700720..116700741, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.77e-09 | 12 |
intestinal epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-21 | 19 |
digestive gland | 2.32e-21 | 19 |
liver bud | 2.32e-21 | 19 |
hepatic diverticulum | 1.59e-18 | 22 |
liver primordium | 1.59e-18 | 22 |
digestive tract diverticulum | 9.62e-18 | 23 |
epithelial sac | 2.29e-16 | 25 |
epithelium of foregut-midgut junction | 2.29e-16 | 25 |
anatomical boundary | 2.29e-16 | 25 |
hepatobiliary system | 2.29e-16 | 25 |
foregut-midgut junction | 2.29e-16 | 25 |
septum transversum | 2.29e-16 | 25 |
sac | 9.32e-16 | 26 |
exocrine gland | 2.70e-13 | 31 |
exocrine system | 2.70e-13 | 31 |
endocrine gland | 7.91e-12 | 35 |
gut epithelium | 9.64e-12 | 54 |
endocrine system | 2.71e-09 | 45 |
abdomen element | 8.31e-08 | 54 |
abdominal segment element | 8.31e-08 | 54 |
endo-epithelium | 8.43e-08 | 82 |
intestinal mucosa | 1.92e-07 | 4 |
wall of intestine | 1.92e-07 | 4 |
gastrointestinal system mucosa | 1.92e-07 | 4 |
gastrointestinal system epithelium | 1.92e-07 | 4 |
intestinal epithelium | 1.92e-07 | 4 |
gland | 3.56e-07 | 59 |
abdominal segment of trunk | 4.63e-07 | 60 |
abdomen | 4.63e-07 | 60 |