FFCP PHASE1:Hg19::chr10:90519817..90519828,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=643418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23452 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-123bp_to_ENST00000491766_5end | |||
|cluster_id=chr10:90519817..90519828,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_LIPN_5end | |||
|id=chr10:90519817..90519828,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.13e-111!42;CL:0000860!1.41e-102!45;CL:0000766!4.74e-81!76;CL:0002009!1.51e-69!65;CL:0002194!1.47e-68!63;CL:0000576!1.47e-68!63;CL:0000040!1.47e-68!63;CL:0000559!1.47e-68!63;CL:0000557!9.76e-63!71;CL:0000839!1.27e-60!70;CL:0000763!2.80e-53!112;CL:0000049!2.80e-53!112;CL:0000738!1.15e-51!140;CL:0002087!3.87e-42!119;CL:0000037!2.01e-39!172;CL:0000566!2.01e-39!172;CL:0002032!1.64e-36!165;CL:0000837!1.64e-36!165;CL:0000988!1.78e-36!182;CL:0002031!4.04e-36!124;CL:0002393!1.43e-23!9;CL:0002397!1.43e-23!9;CL:0000094!1.93e-21!8;CL:0000081!3.53e-15!11;CL:0000134!1.22e-11!358;CL:0002320!3.71e-11!365;CL:0000775!1.15e-09!3;CL:0000219!1.86e-09!390;CL:0000875!5.80e-09!3;CL:0002396!5.80e-09!3;CL:0000842!1.11e-08!3;CL:0000767!2.79e-08!3;CL:0000034!7.59e-08!444;CL:0000723!1.12e-07!436;CL:0000048!1.87e-07!430;CL:0000771!6.47e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.82e-98;33!CL:0002057;7.82e-98;33!CL:0000576;5.12e-72;48!CL:0000473;3.67e-68;39!CL:0000234;3.67e-68;39!CL:0000766;1.19e-52;69!CL:0000763;1.15e-22;100!CL:0002393;5.10e-22;6!CL:0002397;5.10e-22;6!CL:0002087;5.20e-20;104!CL:0000094;3.03e-17;8!CL:0000738;5.34e-16;136!CL:0000775;8.44e-13;3!CL:0000081;2.32e-12;11!CL:0000875;9.40e-12;3!CL:0002396;9.40e-12;3!CL:0000226;2.14e-11;3!CL:0000842;2.14e-11;3!CL:0000988;9.01e-10;177!CL:0000771;5.42e-09;2!CL:0000219;4.05e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.12e-140,42;CL:0002057,8.12e-140,42;CL:0000473,3.39e-121,48;CL:0000234,3.39e-121,48;CL:0000766,7.74e-104,72;CL:0002009,1.47e-96,61;CL:0002194,4.02e-95,59;CL:0000576,4.02e-95,59;CL:0000040,4.02e-95,59;CL:0000559,4.02e-95,59;CL:0000557,3.23e-87,67;CL:0000839,3.19e-84,66;CL:0000763,1.85e-69,108;CL:0000049,1.85e-69,108;CL:0000738,4.51e-61,136;CL:0002087,1.81e-52,115;CL:0000037,1.36e-47,168;CL:0002031,6.51e-45,120;CL:0000988,1.13e-44,177;CL:0002032,1.78e-43,161;CL:0000837,1.78e-43,161;CL:0002393,3.81e-32,9;CL:0002397,3.81e-32,9;CL:0000094,2.71e-17,8;CL:0000134,2.90e-17,354;CL:0002320,9.96e-17,361;CL:0000219,7.69e-15,386;CL:0000775,8.28e-13,3;CL:0000034,1.26e-12,441;CL:0000048,1.57e-12,427;CL:0000081,2.14e-12,11;CL:0000723,3.28e-12,433;CL:0000875,7.79e-12,3;CL:0002396,7.79e-12,3;CL:0000226,1.91e-11,3;CL:0000842,1.91e-11,3;CL:0000771,5.31e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-101;42!CL:0000049;2.41e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.33e-61!102;UBERON:0003061!2.33e-61!102;UBERON:0002193!1.04e-54!112;UBERON:0002371!2.04e-54!80;UBERON:0001474!7.87e-50!86;UBERON:0004765!9.86e-41!101;UBERON:0001434!9.86e-41!101;UBERON:0002405!2.25e-34!115;UBERON:0003081!5.50e-22!216;UBERON:0002204!4.06e-20!167;UBERON:0000178!2.38e-12!15;UBERON:0000179!2.38e-12!15;UBERON:0000463!2.38e-12!15;UBERON:0002384!1.69e-10!375;UBERON:0000926!2.44e-07!448;UBERON:0004120!2.44e-07!448;UBERON:0006603!2.44e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.23e-76,76;UBERON:0002390,6.91e-73,98;UBERON:0003061,6.91e-73,98;UBERON:0001474,9.10e-70,82;UBERON:0002193,2.67e-65,108;UBERON:0004765,8.22e-63,90;UBERON:0002405,1.65e-60,93;UBERON:0001434,1.15e-55,100;UBERON:0003081,2.81e-30,203;UBERON:0002204,1.02e-29,167;UBERON:0000926,5.35e-16,315;UBERON:0004120,5.35e-16,315;UBERON:0006603,5.35e-16,315;UBERON:0002384,5.36e-16,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.77408061658038,0,0,0,0,0,0,4.43196326825502,2.4065333696417,2.17010870715852,0,0,0,2.03557534291391,1.13362783106643,0.727752183563449,5.11343881192506,4.52284676824008,8.6717783850629,4.60307827715441,5.12321413058201,10.6417003449863,42.0589730498675,23.2374486090177,28.4395621848118,8.47090527941721,6.5497476013883,7.19115150224271,45.6064999632645,26.3161802202397,32.6061934157511,2.63881040149373,1.39624560335142,1.27867425159808,16.8321358404579,9.07816359505824,9.9651559839292,10.0499466102697,11.4726242052444,15.6375968187684,6.65939452896706,11.4166067156145,15.1901945971625,2.32380814943136,2.76385589954557,3.14487968262564,1.01095768031846,0.750884464207532,1.28580469357664,2.56511469367124,2.58591680358817,2.37463399894024,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4492584410489,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23907726341901,5.9832291840805,28.5946704270864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.15714200818617,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LIPN | |||
}} |
Latest revision as of 19:50, 19 September 2015
Short description: | p3@LIPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIPN_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -123bp_to_ENST00000491766_5end |
EntrezGene: | LIPN |
HGNC: | 23452 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.23e-76 | 76 |
hematopoietic system | 6.91e-73 | 98 |
blood island | 6.91e-73 | 98 |
bone element | 9.10e-70 | 82 |
hemolymphoid system | 2.67e-65 | 108 |
skeletal element | 8.22e-63 | 90 |
immune system | 1.65e-60 | 93 |
skeletal system | 1.15e-55 | 100 |
lateral plate mesoderm | 2.81e-30 | 203 |
musculoskeletal system | 1.02e-29 | 167 |
mesoderm | 5.35e-16 | 315 |
mesoderm-derived structure | 5.35e-16 | 315 |
presumptive mesoderm | 5.35e-16 | 315 |
connective tissue | 5.36e-16 | 371 |