FFCP PHASE1:Hg19::chr8:110656917..110656960,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:110656917..110656960,-
|short_description=p4@SYBU
|description=CAGE_peak_4_at_SYBU_5end
|association_with_transcript=47bp_to_ENST00000531284_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55638 | |EntrezGene=55638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26011 | |HGNC=26011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000531284_5end | |||
|cluster_id=chr8:110656917..110656960,- | |||
|coexpression_cluster_id=C4718 | |||
|description=CAGE_peak_4_at_SYBU_5end | |||
|id=chr8:110656917..110656960,- | |||
|ontology_enrichment_celltype=CL:0000066!3.97e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.38e-10;29!UBERON:0006601;1.86e-09;82 | |||
|ontology_enrichment_disease=DOID:305!2.45e-11!106;DOID:0050687!1.64e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.69e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-34!115;UBERON:0001049!1.99e-27!57;UBERON:0005068!1.99e-27!57;UBERON:0006241!1.99e-27!57;UBERON:0007135!1.99e-27!57;UBERON:0005743!1.44e-23!86;UBERON:0001017!7.47e-23!82;UBERON:0003075!7.82e-23!86;UBERON:0007284!7.82e-23!86;UBERON:0000955!1.03e-22!69;UBERON:0006238!1.03e-22!69;UBERON:0002616!7.34e-22!59;UBERON:0002346!2.08e-21!90;UBERON:0000033!2.16e-21!123;UBERON:0000153!1.01e-20!129;UBERON:0007811!1.01e-20!129;UBERON:0003080!1.64e-20!42;UBERON:0000073!3.33e-20!94;UBERON:0001016!3.33e-20!94;UBERON:0002780!7.29e-20!41;UBERON:0001890!7.29e-20!41;UBERON:0006240!7.29e-20!41;UBERON:0004121!3.36e-19!169;UBERON:0002020!1.03e-18!34;UBERON:0003528!1.03e-18!34;UBERON:0000924!1.78e-18!173;UBERON:0006601!1.78e-18!173;UBERON:0001893!2.23e-18!34;UBERON:0001869!3.74e-18!32;UBERON:0002791!1.08e-17!33;UBERON:0002619!1.46e-16!22;UBERON:0003056!3.03e-16!61;UBERON:0001950!3.69e-15!20;UBERON:0000064!6.81e-15!219;UBERON:0000956!1.03e-14!25;UBERON:0000203!1.03e-14!25;UBERON:0000475!1.34e-14!365;UBERON:0000481!8.17e-14!347;UBERON:0000477!7.98e-13!286;UBERON:0004111!4.09e-12!241;UBERON:0000062!5.65e-12!511;UBERON:0001007!2.66e-10!155;UBERON:0001555!2.66e-10!155;UBERON:0007026!2.66e-10!155;UBERON:0004119!1.79e-09!169;UBERON:0000925!1.79e-09!169;UBERON:0006595!1.79e-09!169;UBERON:0000025!4.23e-09!194;UBERON:0004921!1.85e-08!129;UBERON:0004185!1.85e-08!129;UBERON:0003076!4.63e-08!15;UBERON:0003057!4.63e-08!15;UBERON:0001004!5.28e-08!72;UBERON:0000077!1.90e-07!130;UBERON:0000483!3.48e-07!309;UBERON:0000063!3.93e-07!97;UBERON:0008947!8.72e-07!38;UBERON:0003258!8.72e-07!38;UBERON:0000119!9.91e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.80e-23;22!UBERON:0001950;1.25e-20;20!UBERON:0001869;3.66e-20;32!UBERON:0003528;7.53e-20;34!UBERON:0002020;7.53e-20;34!UBERON:0002791;1.07e-19;32!UBERON:0000956;4.36e-19;25!UBERON:0000203;4.36e-19;25!UBERON:0001893;1.91e-18;34!UBERON:0002780;2.49e-15;41!UBERON:0001890;2.49e-15;41!UBERON:0000073;5.71e-15;53!UBERON:0002616;5.71e-15;53!UBERON:0001017;6.41e-11;75!UBERON:0000955;7.91e-11;68!UBERON:0007023;5.43e-10;114!UBERON:0001016;7.21e-09;83!UBERON:0000200;7.45e-08;6!UBERON:0000065;2.80e-07;44!UBERON:0002021;3.54e-07;5!UBERON:0004733;7.47e-07;12!UBERON:0002028;7.47e-07;12!UBERON:0001872;9.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.05e-37,114;UBERON:0001049,2.08e-28,56;UBERON:0005068,2.08e-28,56;UBERON:0006241,2.08e-28,56;UBERON:0007135,2.08e-28,56;UBERON:0011216,8.82e-28,223;UBERON:0000073,4.26e-26,53;UBERON:0002616,4.26e-26,53;UBERON:0003528,8.92e-24,34;UBERON:0002020,8.92e-24,34;UBERON:0001017,2.23e-23,81;UBERON:0000955,6.20e-23,68;UBERON:0006238,6.20e-23,68;UBERON:0001869,6.83e-23,32;UBERON:0002619,1.25e-22,22;UBERON:0001893,3.70e-22,34;UBERON:0002791,3.81e-22,32;UBERON:0001950,1.60e-20,20;UBERON:0002780,2.01e-20,41;UBERON:0001890,2.01e-20,41;UBERON:0003080,2.01e-20,41;UBERON:0006240,2.01e-20,41;UBERON:0003075,1.31e-19,82;UBERON:0007284,1.31e-19,82;UBERON:0001016,3.17e-19,89;UBERON:0000956,5.84e-19,25;UBERON:0000203,5.84e-19,25;UBERON:0002346,6.24e-19,86;UBERON:0010371,8.54e-18,104;UBERON:0004121,1.81e-13,171;UBERON:0000924,1.81e-13,171;UBERON:0006601,1.81e-13,171;UBERON:0003056,1.72e-12,61;UBERON:0004111,1.53e-10,240;UBERON:0010314,5.52e-10,132;UBERON:0000025,1.12e-09,192;UBERON:0004921,1.45e-09,118;UBERON:0001007,2.31e-09,145;UBERON:0001555,2.31e-09,145;UBERON:0007026,2.31e-09,145;UBERON:0003076,3.93e-09,15;UBERON:0003057,3.93e-09,15;UBERON:0004119,8.70e-09,160;UBERON:0000925,8.70e-09,160;UBERON:0006595,8.70e-09,160;UBERON:0000200,7.08e-08,6;UBERON:0008947,7.89e-08,38;UBERON:0003258,7.89e-08,38;UBERON:0002021,3.73e-07,5;UBERON:0004733,6.37e-07,12;UBERON:0002028,6.37e-07,12;UBERON:0007277,6.37e-07,12;UBERON:0001041,6.97e-07,87;UBERON:0001872,9.23e-07,5 | |||
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| ||
|short_description=p4@SYBU | |||
}} | }} |
Latest revision as of 03:59, 25 September 2015
Short description: | p4@SYBU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYBU_5end |
Coexpression cluster: | C4718_cerebellum_pancreas_occipital_pharyngeal_Hepatocyte_cervical_rectal |
Association with transcript: | 47bp_to_ENST00000531284_5end |
EntrezGene: | SYBU |
HGNC: | 26011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.69e-08 | 106 |