FFCP PHASE1:Hg19::chr10:8106040..8106054,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:8106040..8106054,+ | |||
|coexpression_cluster_id=C1124 | |||
|description=CAGE_peak_at_chr10:8106040..8106054,+ | |||
|id=chr10:8106040..8106054,+ | |||
|ontology_enrichment_celltype=CL:0002541!4.50e-08!3;CL:0000084!8.24e-08!25;CL:0000827!8.24e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.14e-27;3!CL:0000349;4.36e-17;19!CL:0000623;7.26e-08;3!CL:0002577;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-27,3;CL:0000349,4.27e-17,19;CL:0002577,7.26e-08,3;CL:0000623,7.76e-08,3;CL:0000825,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.44e-10!4;DOID:1612!1.44e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.82e-45;4!DOID:1612;1.82e-45;4!DOID:299;7.40e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.69e-45,4;DOID:1612,1.69e-45,4;DOID:299,7.31e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.79e-15!14;UBERON:0000158!6.79e-15!14;UBERON:0003124!9.58e-12!7;UBERON:0000478!3.45e-09!24;UBERON:0000476!4.50e-08!3;UBERON:0000920!4.50e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.14e-27;3!UBERON:0000920;1.14e-27;3!UBERON:0000310;1.10e-18;10!UBERON:0005631;1.40e-18;10!UBERON:0000158;1.40e-18;10!UBERON:0001443;4.71e-17;11!UBERON:0000478;1.29e-13;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.22e-27,3;UBERON:0003124,3.45e-26,7;UBERON:0005631,4.97e-23,14;UBERON:0000158,4.97e-23,14;UBERON:0000310,1.07e-18,10;UBERON:0001443,4.59e-17,11;UBERON:0000478,1.27e-13,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.768547918354051,0.260118695119756,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,3.95102198979638,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.50939302401662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.569134746787313,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.67121139316383,0.593929361665277,0.921482106297696,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,4.94812746061943,0.874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0.69169171316418,0.718061155278177,1.95565269459615,2.55200927785536,0.366390373607449,5.33034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0.335434687599266,0,0.157363764404994,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.76736622782191,0.754773679776773,0,0.436838552768056,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0,0,0,0,0.23806443146374,0.258355639344024,0.124149428591716,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:8106040..8106054,+ | |||
}} |
Latest revision as of 16:00, 23 July 2015
Short description: | p@chr10:8106040..8106054, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8106040..8106054, + |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-27 | 3 |
extraembryonic cell | 4.27e-17 | 19 |
placental epithelial cell | 7.26e-08 | 3 |
natural killer cell | 7.76e-08 | 3 |
pro-NK cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.22e-27 | 3 |
chorion | 3.45e-26 | 7 |
extraembryonic membrane | 4.97e-23 | 14 |
membranous layer | 4.97e-23 | 14 |
breast | 1.07e-18 | 10 |
chest | 4.59e-17 | 11 |
extraembryonic structure | 1.27e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.69e-45 | 4 |
breast cancer | 1.69e-45 | 4 |
adenocarcinoma | 7.31e-08 | 25 |