FFCP PHASE1:Hg19::chr10:70856882..70856896,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9361 | |||
|TSSclassifier=strong | |||
|UniProt=P10124 | |||
|association_with_transcript=21bp_to_X12765_5end | |||
|cluster_id=chr10:70856882..70856896,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_8_at_SRGN_5end | |||
|id=chr10:70856882..70856896,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.62e-46!112;CL:0000049!2.62e-46!112;CL:0000766!1.45e-42!76;CL:0002032!2.91e-40!165;CL:0000837!2.91e-40!165;CL:0000037!3.66e-40!172;CL:0000566!3.66e-40!172;CL:0000988!4.69e-39!182;CL:0000839!1.65e-36!70;CL:0002057!3.82e-36!42;CL:0000557!5.65e-36!71;CL:0000738!2.99e-35!140;CL:0002009!7.14e-34!65;CL:0002194!6.35e-33!63;CL:0000576!6.35e-33!63;CL:0000040!6.35e-33!63;CL:0000559!6.35e-33!63;CL:0000860!2.38e-32!45;CL:0002031!5.53e-30!124;CL:0002087!5.40e-26!119;CL:0002320!4.33e-16!365;CL:0000134!5.70e-16!358;CL:0000048!1.09e-14!430;CL:0000723!9.02e-14!436;CL:0000034!1.27e-13!444;CL:0000219!1.17e-11!390;CL:0000094!6.28e-08!8;CL:0000081!1.58e-07!11;CL:0002393!9.28e-07!9;CL:0002397!9.28e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.99e-78;33!CL:0002057;4.99e-78;33!CL:0000473;2.01e-57;39!CL:0000234;2.01e-57;39!CL:0000576;4.05e-48;48!CL:0000766;2.88e-35;69!CL:0000763;2.04e-21;100!CL:0002087;3.42e-14;104!CL:0000738;1.30e-13;136!CL:0000094;6.70e-13;8!CL:0000988;5.02e-10;177!CL:0000775;7.74e-10;3!CL:0000081;3.80e-09;11!CL:0002393;5.10e-07;6!CL:0002397;5.10e-07;6!CL:0000771;6.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.64e-83,42;CL:0002057,4.64e-83,42;CL:0000766,4.79e-77,72;CL:0000473,1.88e-75,48;CL:0000234,1.88e-75,48;CL:0002194,1.53e-64,59;CL:0000576,1.53e-64,59;CL:0000040,1.53e-64,59;CL:0000559,1.53e-64,59;CL:0000839,1.08e-62,66;CL:0002009,4.34e-62,61;CL:0000763,6.53e-62,108;CL:0000049,6.53e-62,108;CL:0000557,1.35e-61,67;CL:0000738,1.37e-51,136;CL:0002032,5.72e-51,161;CL:0000837,5.72e-51,161;CL:0000037,4.11e-50,168;CL:0000988,8.42e-47,177;CL:0002087,3.91e-44,115;CL:0002031,1.04e-43,120;CL:0000134,1.24e-16,354;CL:0002320,5.13e-16,361;CL:0000219,7.60e-14,386;CL:0000094,7.01e-13,8;CL:0000048,1.36e-12,427;CL:0000034,2.26e-12,441;CL:0000723,3.34e-12,433;CL:0000775,7.65e-10,3;CL:0000081,3.92e-09,11;CL:0000771,6.48e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-59;42!CL:0000049;6.64e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-38!102;UBERON:0003061!1.17e-38!102;UBERON:0002371!1.01e-36!80;UBERON:0002193!3.98e-36!112;UBERON:0001474!1.71e-33!86;UBERON:0004765!6.60e-30!101;UBERON:0001434!6.60e-30!101;UBERON:0002405!5.09e-26!115;UBERON:0002204!4.06e-20!167;UBERON:0003081!1.80e-17!216;UBERON:0002384!5.86e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.87e-56,76;UBERON:0001474,6.40e-51,82;UBERON:0002390,1.24e-49,98;UBERON:0003061,1.24e-49,98;UBERON:0004765,2.20e-45,90;UBERON:0002193,6.65e-44,108;UBERON:0002405,1.49e-43,93;UBERON:0001434,1.06e-39,100;UBERON:0002204,1.36e-21,167;UBERON:0003081,6.78e-21,203;UBERON:0002384,5.25e-16,371;UBERON:0000926,4.18e-09,315;UBERON:0004120,4.18e-09,315;UBERON:0006603,4.18e-09,315 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0,1.95173119516203,0,0,0,0,0,0,1.22261449196722,0.492603536699674,1.02324015707783,3.14691421479123,0.767658796194425,0.309632246632152,0,0,0,0,0,0,1.10799081706375,2.80762226458198,2.60413044859022,0.223915474239924,0.647787332037959,0.257575567634187,5.52513307362346,1.88937971844405,3.39617685662943,7.20530014407622,4.93401465626191,2.16794459626573,8.34307937734236,5.37937483711111,4.25668013799453,8.61864201841546,3.22742341791913,6.77132432971709,6.21199720490596,3.27487380069415,5.8428105955722,13.7737751566906,4.49300637906531,7.67204550958849,7.91643120448119,3.59034583718937,1.27867425159808,11.8985787837719,7.37600792098482,9.34233373493363,7.5374599577023,4.17186334736161,4.56096573880745,12.7133895553007,5.89244217580104,6.0127853613768,1.05627643155971,0.425208599930087,0.209658645508376,1.68492946719743,2.10247649978109,1.76798145366788,0.285012743741249,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,1.12101712596307,0.790152254325231,0.393419540227666,1.17903228824749,1.23360899399706,0.167186495390678,0,0,0,0.891283655081389,0.589211814949674,0.221533894583621,0.541607727530031,0.128091319725675,0.130059347559878,0.657751618414705,0.276350017785848,0,0.444859689486181,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0,1.06976078313403,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,1.0447784237956,0.930705723632056,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.626984899610432,0,0.35576626268671,0,0,0,0.488124115096339,0,2.43042584364528,0.267899184852239,0,0.563057402416611,0,0,0.366403487860815,5.27121669744253,7.75560528296651,0,0.496971951695318,0.886413581652058,0.264818361626438,0.573673241497627,0,0,0,0,0.622422070799533,0.67355336034844,0.326923806226917,0.454072282934794,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.616339038092582,1.03664057770386,2.30591925467138,0.25248486685276,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,2.51128545716063,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0.224170287987055,0,0.431255149719035,0.77005821767849,0,0,0,0,0,11.9841123831549,29.9161459204025,5.38740167466846,0,0,0.271265023699736,0.623912584592421,0.178428988797162,0.946214490203608,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,1.72571360654893,0.74709290462411,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.5740617341532,0,0,0,0,0,0.572499546967965,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.974853958525138,0,0,0,0,0,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,1.52927441428475,1.13929437434833,0.476463550915578,0,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,2.52717460302113,0.456469358066384,4.0736772900986,0,0.50787533340481,0.321176150207399,0.605399121573143,5.11015485228392,2.40453741329035,0,0.447352215784832,1.50164227540718,0.781552381608161,0,0,0.540911356951966,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,2.04628948090749,0.394573622547734,0,2.22273980289274,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.56980256395025,0.166211681900156,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,1.05154941711726,0.279282401272254,0,0,0,0.429226048136571,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0,0,1.79287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084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| |||
|short_description=p8@SRGN | |||
}} |
Latest revision as of 00:28, 19 September 2015
Short description: | p8@SRGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SRGN_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 21bp_to_X12765_5end |
EntrezGene: | SRGN |
HGNC: | 9361 |
UniProt: | P10124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.64e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.64e-83 | 42 |
myeloid leukocyte | 4.79e-77 | 72 |
defensive cell | 1.88e-75 | 48 |
phagocyte | 1.88e-75 | 48 |
monopoietic cell | 1.53e-64 | 59 |
monocyte | 1.53e-64 | 59 |
monoblast | 1.53e-64 | 59 |
promonocyte | 1.53e-64 | 59 |
myeloid lineage restricted progenitor cell | 1.08e-62 | 66 |
macrophage dendritic cell progenitor | 4.34e-62 | 61 |
myeloid cell | 6.53e-62 | 108 |
common myeloid progenitor | 6.53e-62 | 108 |
granulocyte monocyte progenitor cell | 1.35e-61 | 67 |
leukocyte | 1.37e-51 | 136 |
hematopoietic oligopotent progenitor cell | 5.72e-51 | 161 |
hematopoietic multipotent progenitor cell | 5.72e-51 | 161 |
hematopoietic stem cell | 4.11e-50 | 168 |
hematopoietic cell | 8.42e-47 | 177 |
nongranular leukocyte | 3.91e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-43 | 120 |
mesenchymal cell | 1.24e-16 | 354 |
connective tissue cell | 5.13e-16 | 361 |
motile cell | 7.60e-14 | 386 |
granulocyte | 7.01e-13 | 8 |
multi fate stem cell | 1.36e-12 | 427 |
stem cell | 2.26e-12 | 441 |
somatic stem cell | 3.34e-12 | 433 |
neutrophil | 7.65e-10 | 3 |
blood cell | 3.92e-09 | 11 |
eosinophil | 6.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.87e-56 | 76 |
bone element | 6.40e-51 | 82 |
hematopoietic system | 1.24e-49 | 98 |
blood island | 1.24e-49 | 98 |
skeletal element | 2.20e-45 | 90 |
hemolymphoid system | 6.65e-44 | 108 |
immune system | 1.49e-43 | 93 |
skeletal system | 1.06e-39 | 100 |
musculoskeletal system | 1.36e-21 | 167 |
lateral plate mesoderm | 6.78e-21 | 203 |
connective tissue | 5.25e-16 | 371 |
mesoderm | 4.18e-09 | 315 |
mesoderm-derived structure | 4.18e-09 | 315 |
presumptive mesoderm | 4.18e-09 | 315 |