FFCP PHASE1:Hg19::chr10:66185829..66185832,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:66185829..66185832,+ | |||
|description=CAGE_peak_at_chr10:66185829..66185832,+ | |||
|id=chr10:66185829..66185832,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.62e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;9.45e-18;4!DOID:1325;9.43e-11;7!DOID:3904;9.43e-11;7!DOID:3905;1.16e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001869!3.69e-22!32;UBERON:0002791!2.00e-21!33;UBERON:0001950!3.75e-21!20;UBERON:0001017!8.13e-21!82;UBERON:0002020!9.87e-21!34;UBERON:0003528!9.87e-21!34;UBERON:0001893!9.87e-21!34;UBERON:0001049!1.42e-20!57;UBERON:0005068!1.42e-20!57;UBERON:0006241!1.42e-20!57;UBERON:0007135!1.42e-20!57;UBERON:0002616!9.32e-20!59;UBERON:0002780!1.14e-19!41;UBERON:0001890!1.14e-19!41;UBERON:0006240!1.14e-19!41;UBERON:0005743!1.20e-19!86;UBERON:0002619!3.78e-19!22;UBERON:0003080!3.85e-19!42;UBERON:0002346!7.77e-19!90;UBERON:0000955!3.06e-18!69;UBERON:0006238!3.06e-18!69;UBERON:0003075!7.23e-18!86;UBERON:0007284!7.23e-18!86;UBERON:0000073!2.24e-17!94;UBERON:0001016!2.24e-17!94;UBERON:0000956!1.01e-16!25;UBERON:0000203!1.01e-16!25;UBERON:0002771!1.69e-15!3;UBERON:0001871!3.77e-15!7;UBERON:0003056!2.84e-14!61;UBERON:0007023!5.58e-14!115;UBERON:0000200!1.43e-13!6;UBERON:0000369!6.15e-12!4;UBERON:0002435!6.15e-12!4;UBERON:0000204!6.15e-12!4;UBERON:0010082!6.15e-12!4;UBERON:0000033!4.66e-11!123;UBERON:0001870!7.73e-11!2;UBERON:0000924!1.66e-10!173;UBERON:0006601!1.66e-10!173;UBERON:0000153!2.39e-10!129;UBERON:0007811!2.39e-10!129;UBERON:0004121!9.09e-10!169;UBERON:0002420!3.43e-09!9;UBERON:0007245!3.43e-09!9;UBERON:0010009!3.43e-09!9;UBERON:0010011!3.43e-09!9;UBERON:0000454!3.43e-09!9;UBERON:0002037!3.09e-08!6;UBERON:0006215!3.09e-08!6;UBERON:0005383!6.98e-08!3;UBERON:0005382!6.98e-08!3;UBERON:0009663!5.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;3.34e-66;1!UBERON:0005383;3.66e-23;3!UBERON:0005382;3.66e-23;3!UBERON:0000369;9.45e-18;4!UBERON:0002435;9.45e-18;4!UBERON:0000204;9.45e-18;4!UBERON:0002037;2.19e-12;6!UBERON:0009663;9.43e-11;7!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0002420;1.16e-08;9!UBERON:0000125;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0002308;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.39e-66,1;UBERON:0005383,3.27e-23,3;UBERON:0005382,3.27e-23,3;UBERON:0000369,8.69e-18,4;UBERON:0002435,8.69e-18,4;UBERON:0000204,8.69e-18,4;UBERON:0010082,8.69e-18,4;UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0009663,8.99e-11,7;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0002420,1.12e-08,9;UBERON:0000125,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0002308,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,3.05163472634166,0.995213339381022,0.295547618953547,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.500763722825999,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826747186004736,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,1.46829906650648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:66185829..66185832,+ | |||
}} |
Latest revision as of 14:49, 23 July 2015
Short description: | p@chr10:66185829..66185832, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:66185829..66185832, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 2.39e-66 | 1 |
caudate-putamen | 3.27e-23 | 3 |
dorsal striatum | 3.27e-23 | 3 |
corpus striatum | 8.69e-18 | 4 |
striatum | 8.69e-18 | 4 |
ventral part of telencephalon | 8.69e-18 | 4 |
future corpus striatum | 8.69e-18 | 4 |
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
telencephalic nucleus | 8.99e-11 | 7 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
basal ganglion | 1.12e-08 | 9 |
neural nucleus | 1.12e-08 | 9 |
nuclear complex of neuraxis | 1.12e-08 | 9 |
nucleus of brain | 1.12e-08 | 9 |
aggregate regional part of brain | 1.12e-08 | 9 |
collection of basal ganglia | 1.12e-08 | 9 |
cerebral subcortex | 1.12e-08 | 9 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |