FFCP PHASE1:Hg19::chr10:52213807..52213811,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:52213807..52213811,- | |||
|description=CAGE_peak_at_chr10:52213807..52213811,- | |||
|id=chr10:52213807..52213811,- | |||
|ontology_enrichment_celltype=CL:0002087!8.66e-11!119;CL:0002031!4.39e-10!124;CL:0000037!4.40e-10!172;CL:0000566!4.40e-10!172;CL:0002032!5.65e-10!165;CL:0000837!5.65e-10!165;CL:0000542!1.27e-09!53;CL:0000051!1.27e-09!53;CL:0000838!2.54e-09!52;CL:0000988!4.79e-09!182;CL:0000738!6.02e-09!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.16e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.40e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.54e-27!115;UBERON:0001049!3.47e-11!57;UBERON:0005068!3.47e-11!57;UBERON:0006241!3.47e-11!57;UBERON:0007135!3.47e-11!57;UBERON:0003080!5.13e-10!42;UBERON:0002780!8.92e-10!41;UBERON:0001890!8.92e-10!41;UBERON:0006240!8.92e-10!41;UBERON:0002616!2.58e-08!59;UBERON:0000955!3.14e-08!69;UBERON:0006238!3.14e-08!69;UBERON:0001017!1.54e-07!82;UBERON:0002020!1.73e-07!34;UBERON:0003528!1.73e-07!34;UBERON:0001893!2.41e-07!34;UBERON:0002791!5.59e-07!33;UBERON:0000073!5.74e-07!94;UBERON:0001016!5.74e-07!94;UBERON:0005743!6.95e-07!86;UBERON:0002346!8.20e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;1.99e-10;9!UBERON:0002308;1.99e-10;9!UBERON:0002298;9.08e-09;6!UBERON:0000073;2.79e-08;53!UBERON:0002616;2.79e-08;53!UBERON:0009663;3.39e-08;7!UBERON:0002420;4.00e-08;9!UBERON:0007245;4.00e-08;9!UBERON:0010009;4.00e-08;9!UBERON:0010011;4.00e-08;9!UBERON:0000454;4.00e-08;9!UBERON:0002784;7.04e-08;4!UBERON:0002780;2.25e-07;41!UBERON:0001890;2.25e-07;41!UBERON:0007023;2.33e-07;114!UBERON:0000369;5.88e-07;4!UBERON:0002435;5.88e-07;4!UBERON:0000204;5.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.15e-21,114;UBERON:0001049,3.99e-14,56;UBERON:0005068,3.99e-14,56;UBERON:0006241,3.99e-14,56;UBERON:0007135,3.99e-14,56;UBERON:0000073,6.96e-13,53;UBERON:0002616,6.96e-13,53;UBERON:0003075,9.15e-12,82;UBERON:0007284,9.15e-12,82;UBERON:0002346,9.30e-12,86;UBERON:0000125,1.35e-10,9;UBERON:0002308,1.35e-10,9;UBERON:0000955,5.75e-10,68;UBERON:0006238,5.75e-10,68;UBERON:0001017,1.37e-09,81;UBERON:0002780,3.57e-09,41;UBERON:0001890,3.57e-09,41;UBERON:0003080,3.57e-09,41;UBERON:0006240,3.57e-09,41;UBERON:0002298,7.86e-09,6;UBERON:0001016,1.02e-08,89;UBERON:0010371,3.80e-08,104;UBERON:0009663,4.66e-08,7;UBERON:0002420,7.31e-08,9;UBERON:0007245,7.31e-08,9;UBERON:0010009,7.31e-08,9;UBERON:0010011,7.31e-08,9;UBERON:0000454,7.31e-08,9;UBERON:0002784,8.64e-08,4;UBERON:0003056,5.67e-07,61 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.410623275218653,0.125542639594803,0.916960868975415,0.656804715599566,1.41679406364623,0,0,0.154816123316076,0,0,0,0.154934401160603,1.9903692548239,0,1.10799081706375,2.20598892217156,2.17010870715852,1.79132379391939,0.32389366601898,1.03030227053675,0.145398238779565,1.51150377475524,0,0.697287110717054,1.23350366406548,0.929119112685311,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0.941211697713023,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.797854630486527,0.852449501065388,1.45104619314292,0,1.24564449799115,0.251248665256743,1.0429658368404,0,0,0.368277635987565,0,0.422510572623884,0.850417199860174,0.419317291016752,0.673971786878971,0.450530678524519,0.16072558669708,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0.853460445133014,0.400395987036012,1.14950487990897,0,0,4.55370375287559,2.34894875748376,3.82273228125229,0,0,0.263384084775077,2.9506465517075,2.35806457649499,1.23360899399706,0.334372990781356,1.30368906653436,0,0,0.334231370655521,0.883817722424512,0.886135578334485,2.16643091012012,0.640456598628376,0.780356085359269,0.986627427622057,0.829050053357545,0.869409257205157,1.18629250529648,2.1403266247177,1.04535523804977,0.226618685395132,0.766440987203842,0.34362744548263,1.51811815211702,0.318565414324097,0.651083453856419,0,0.150575119077773,0,1.24930726552346,0.473554504088034,0,1.20964045934839,1.06976078313403,1.30341963494519,4.87613732627923,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.43917392846563,0.523916301990851,0,0,0.324547393654683,0.348259474598534,0.398873881556595,1.19245312152671,0,0,0,0,0,0,0,0,0,0,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0.860509862246441,0,0,0,0,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0.448346041655403,0,0.161872944368132,0.280901613404497,0.204154171254893,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0,0.193260853163297,0.545492241181669,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,2.53510069643662,1.96565443335525,2.95394953340702,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0.148631162288728,0.93733833986777,0,0,0.179117045405697,0.290633938513962,0,2.95597942737566,0.264145302039678,0.621984346622316,0.432359860250884,0.25248486685276,0,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.07333828582095,0.775630294546667,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0.784596007954691,1.97030760201927,1.2937654491571,2.82354679815446,0,0,1.54657762555539,0.335032530668698,0,1.49801404789436,2.99161459204025,2.90090859405225,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0,0,1.24060815673732,2.5885704098234,0.853820462427555,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,1.09629938322967,1.0457418040996,0,0,0,1.23649213977267,0.183138929636687,0.247528499761764,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.384380134730212,1.02090169995667,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,1.31717957183961,0,0,0,0,0,1.22386941009813,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,2.84823593587081,0.714695326373367,1.23408681925858,0,1.08006287447623,1.58625035258854,0.427296284509893,0,0,0.929015875628594,0.577076851905779,1.20941133692304,0.637705090915289,0,0,0.846694330895531,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0.338583555603207,0.321176150207399,0,0.425846237690326,1.03051603426729,0.921722292925374,0,0.166849141711909,0,0.278406173895242,1.23087398947712,1.08182271390393,0.66614393599564,7.04935025439248,0,1.02555725490326,0.121360521749513,0.891547074219827,1.13654458722565,0.47748896947538,0.296964680832639,1.53580351049616,0.994147647766298,1.1253553312841,0.111308705022906,0.16480387422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| |||
|short_description=p@chr10:52213807..52213811,- | |||
}} |
Latest revision as of 14:05, 23 July 2015
Short description: | p@chr10:52213807..52213811, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:52213807..52213811, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.16e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.15e-21 | 114 |
neural tube | 3.99e-14 | 56 |
neural rod | 3.99e-14 | 56 |
future spinal cord | 3.99e-14 | 56 |
neural keel | 3.99e-14 | 56 |
regional part of nervous system | 6.96e-13 | 53 |
regional part of brain | 6.96e-13 | 53 |
neural plate | 9.15e-12 | 82 |
presumptive neural plate | 9.15e-12 | 82 |
neurectoderm | 9.30e-12 | 86 |
neural nucleus | 1.35e-10 | 9 |
nucleus of brain | 1.35e-10 | 9 |
brain | 5.75e-10 | 68 |
future brain | 5.75e-10 | 68 |
central nervous system | 1.37e-09 | 81 |
regional part of forebrain | 3.57e-09 | 41 |
forebrain | 3.57e-09 | 41 |
anterior neural tube | 3.57e-09 | 41 |
future forebrain | 3.57e-09 | 41 |
brainstem | 7.86e-09 | 6 |
nervous system | 1.02e-08 | 89 |
ecto-epithelium | 3.80e-08 | 104 |
telencephalic nucleus | 4.66e-08 | 7 |
basal ganglion | 7.31e-08 | 9 |
nuclear complex of neuraxis | 7.31e-08 | 9 |
aggregate regional part of brain | 7.31e-08 | 9 |
collection of basal ganglia | 7.31e-08 | 9 |
cerebral subcortex | 7.31e-08 | 9 |
regional part of diencephalon | 8.64e-08 | 4 |
pre-chordal neural plate | 5.67e-07 | 61 |