FFCP PHASE1:Hg19::chr10:33200984..33201060,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000494395_5end | |||
|cluster_id=chr10:33200984..33201060,- | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_5_at_ITGB1_5end | |||
|id=chr10:33200984..33201060,- | |||
|ontology_enrichment_celltype=CL:0000057!1.10e-12!75;CL:0000055!1.59e-11!180;CL:0000548!2.15e-10!679;CL:0000004!2.15e-10!679;CL:0000255!2.15e-10!679;CL:0000012!1.28e-09!682;CL:0000144!4.15e-08!625;CL:0002620!1.33e-07!23;CL:0000220!1.77e-07!246;CL:0002321!2.10e-07!248;CL:0002334!7.28e-07!12;CL:0002371!7.60e-07!591;CL:0000222!8.80e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000134;8.28e-08;55!CL:0002620;1.48e-07;23!CL:0002334;1.55e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-15,76;CL:0002620,7.29e-08,23;CL:0000222,1.65e-07,121;CL:0002334,2.00e-07,12;CL:0000723,2.83e-07,433;CL:0002321,2.92e-07,250;CL:0000048,4.43e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.22e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.35e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.42e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.05e-08!448;UBERON:0004120!1.05e-08!448;UBERON:0006603!1.05e-08!448;UBERON:0003102!1.38e-08!95;UBERON:0002199!7.22e-08!45;UBERON:0002416!7.22e-08!45;UBERON:0002097!3.71e-07!40;UBERON:0004872!6.00e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.08e-08,315;UBERON:0004120,1.08e-08,315;UBERON:0006603,1.08e-08,315;UBERON:0003102,1.50e-08,99;UBERON:0002199,1.76e-08,46;UBERON:0002416,1.76e-08,46;UBERON:0002097,1.08e-07,41 | |||
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| |||
|short_description=p5@ITGB1 | |||
}} |
Latest revision as of 00:17, 18 September 2015
Short description: | p5@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITGB1_5end |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | 0bp_to_ENST00000494395_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.05e-15 | 76 |
skin fibroblast | 7.29e-08 | 23 |
mesodermal cell | 1.65e-07 | 121 |
preadipocyte | 2.00e-07 | 12 |
somatic stem cell | 2.83e-07 | 433 |
embryonic cell | 2.92e-07 | 250 |
multi fate stem cell | 4.43e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.08e-08 | 315 |
mesoderm-derived structure | 1.08e-08 | 315 |
presumptive mesoderm | 1.08e-08 | 315 |
surface structure | 1.50e-08 | 99 |
integument | 1.76e-08 | 46 |
integumental system | 1.76e-08 | 46 |
skin of body | 1.08e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.42e-09 | 14 |