FFCP PHASE1:Hg19::chr10:28691951..28691987,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:28691951..28691987,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:28691951..28691987,+ | |||
|id=chr10:28691951..28691987,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.37e-109!42;CL:0000860!3.50e-101!45;CL:0000766!2.62e-79!76;CL:0002009!7.61e-75!65;CL:0002194!1.08e-68!63;CL:0000576!1.08e-68!63;CL:0000040!1.08e-68!63;CL:0000559!1.08e-68!63;CL:0000557!6.79e-68!71;CL:0000839!4.17e-61!70;CL:0000763!5.71e-57!112;CL:0000049!5.71e-57!112;CL:0000738!1.06e-53!140;CL:0000037!5.42e-42!172;CL:0000566!5.42e-42!172;CL:0002087!5.55e-42!119;CL:0002031!6.88e-40!124;CL:0002032!9.44e-40!165;CL:0000837!9.44e-40!165;CL:0000988!3.60e-39!182;CL:0002393!3.12e-35!9;CL:0002397!3.12e-35!9;CL:0000094!2.49e-18!8;CL:0000134!3.37e-17!358;CL:0002320!1.12e-16!365;CL:0000219!7.64e-15!390;CL:0000767!2.24e-13!3;CL:0000081!3.80e-13!11;CL:0000034!7.94e-13!444;CL:0000048!1.20e-12!430;CL:0000723!2.47e-12!436;CL:0000875!4.89e-12!3;CL:0002396!4.89e-12!3;CL:0001014!5.05e-09!2;CL:0001016!5.05e-09!2;CL:0000063!8.62e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.27e-36;6!CL:0002397;1.27e-36;6!CL:0000576;8.10e-35;48!CL:0000860;1.14e-34;33!CL:0002057;1.14e-34;33!CL:0000766;1.34e-31;69!CL:0000094;4.71e-27;8!CL:0000473;4.80e-26;39!CL:0000234;4.80e-26;39!CL:0000081;1.51e-19;11!CL:0000767;3.12e-19;3!CL:0000763;7.91e-13;100!CL:0001014;9.26e-13;2!CL:0001016;9.26e-13;2!CL:0002087;5.38e-10;104!CL:0000738;1.08e-09;136!CL:0000226;5.51e-09;3!CL:0000842;5.51e-09;3!CL:0000775;8.40e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.38e-66,42;CL:0002057,5.38e-66,42;CL:0000766,1.63e-60,72;CL:0000473,3.41e-57,48;CL:0000234,3.41e-57,48;CL:0002009,7.39e-52,61;CL:0000557,7.29e-47,67;CL:0000763,4.63e-45,108;CL:0000049,4.63e-45,108;CL:0002194,7.25e-45,59;CL:0000576,7.25e-45,59;CL:0000040,7.25e-45,59;CL:0000559,7.25e-45,59;CL:0000738,3.57e-40,136;CL:0000839,1.04e-39,66;CL:0002393,1.44e-32,9;CL:0002397,1.44e-32,9;CL:0000037,1.56e-31,168;CL:0000988,1.17e-29,177;CL:0002032,1.48e-28,161;CL:0000837,1.48e-28,161;CL:0000094,3.93e-27,8;CL:0002087,1.51e-25,115;CL:0002031,3.10e-24,120;CL:0000081,1.32e-19,11;CL:0000767,2.59e-19,3;CL:0001014,8.99e-13,2;CL:0001016,8.99e-13,2;CL:0000134,4.76e-12,354;CL:0002320,1.05e-11,361;CL:0000219,1.74e-10,386;CL:0000034,2.02e-09,441;CL:0000226,5.29e-09,3;CL:0000842,5.29e-09,3;CL:0000048,5.41e-09,427;CL:0000775,7.91e-09,3;CL:0000723,8.70e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-51;42!CL:0000049;5.67e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.13e-59!80;UBERON:0001474!1.04e-54!86;UBERON:0002390!1.97e-53!102;UBERON:0003061!1.97e-53!102;UBERON:0002193!6.56e-48!112;UBERON:0004765!2.11e-45!101;UBERON:0001434!2.11e-45!101;UBERON:0002405!3.27e-41!115;UBERON:0002204!3.42e-24!167;UBERON:0003081!2.30e-23!216;UBERON:0002384!5.73e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.87e-41,76;UBERON:0001474,1.56e-37,82;UBERON:0002390,1.44e-36,98;UBERON:0003061,1.44e-36,98;UBERON:0004765,8.20e-34,90;UBERON:0002193,9.48e-33,108;UBERON:0002405,1.40e-32,93;UBERON:0001434,5.46e-30,100;UBERON:0002204,4.25e-16,167;UBERON:0003081,4.09e-15,203;UBERON:0002384,3.12e-11,371;UBERON:0000926,6.40e-08,315;UBERON:0004120,6.40e-08,315;UBERON:0006603,6.40e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,4.98978217526377,4.95411594611443,0,0,0,0,0,0,8.30993112797816,19.4528114046037,11.718587018656,0,0,0,0.436194716338694,0,0,4.88100977501938,6.57868620834921,0,2.3015391385772,6.40401766322752,0.236482229888585,40.679990326921,56.1571674717929,1.35426486594342,1.31769637679823,0.272906150057846,0.224723484445085,14.6920268338033,14.4418062184242,0,0,0.199463657621632,0,2.03146467040009,0.56738522469114,0,4.27122730936464,4.17186334736161,0.217188844705117,1.21079900526674,3.68277635987565,0.316462387440884,1.47878700418359,7.65375479874157,1.67726916406701,0.336985893439485,0.150176892841506,0.32145117339416,1.14005097496499,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,2.24702107184155,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37285620900479,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28691951..28691987,+ | |||
}} |
Latest revision as of 12:58, 23 July 2015
Short description: | p@chr10:28691951..28691987, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28691951..28691987, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.87e-41 | 76 |
bone element | 1.56e-37 | 82 |
hematopoietic system | 1.44e-36 | 98 |
blood island | 1.44e-36 | 98 |
skeletal element | 8.20e-34 | 90 |
hemolymphoid system | 9.48e-33 | 108 |
immune system | 1.40e-32 | 93 |
skeletal system | 5.46e-30 | 100 |
musculoskeletal system | 4.25e-16 | 167 |
lateral plate mesoderm | 4.09e-15 | 203 |
connective tissue | 3.12e-11 | 371 |
mesoderm | 6.40e-08 | 315 |
mesoderm-derived structure | 6.40e-08 | 315 |
presumptive mesoderm | 6.40e-08 | 315 |