FFCP PHASE1:Hg19::chr10:21581922..21581939,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:21581922..21581939,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr10:21581922..21581939,- | |||
|id=chr10:21581922..21581939,- | |||
|ontology_enrichment_celltype=CL:0002322!2.38e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.01e-35;5!CL:0000540;3.60e-17;6!CL:0000404;3.60e-17;6!CL:0000039;4.07e-15;7!CL:0000586;4.07e-15;7!CL:0002321;4.01e-12;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.05e-35,5;CL:0000540,3.14e-17,6;CL:0000031,3.14e-17,6;CL:0000404,3.14e-17,6;CL:0000039,4.17e-15,7;CL:0000586,4.17e-15,7;CL:0000047,4.46e-13,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.15e-18;10!UBERON:0005564;2.15e-18;10!CL:0000031;3.60e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.75e-08;22!DOID:2994;1.75e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.77e-08,22;DOID:2994,1.77e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-20!115;UBERON:0001017!1.53e-16!82;UBERON:0005743!1.90e-16!86;UBERON:0001049!6.71e-16!57;UBERON:0005068!6.71e-16!57;UBERON:0006241!6.71e-16!57;UBERON:0007135!6.71e-16!57;UBERON:0000073!6.41e-14!94;UBERON:0001016!6.41e-14!94;UBERON:0002298!1.53e-12!8;UBERON:0002616!2.02e-12!59;UBERON:0002346!2.74e-12!90;UBERON:0003075!3.16e-12!86;UBERON:0007284!3.16e-12!86;UBERON:0000955!3.67e-12!69;UBERON:0006238!3.67e-12!69;UBERON:0003080!2.94e-11!42;UBERON:0001893!1.54e-10!34;UBERON:0002020!1.63e-10!34;UBERON:0003528!1.63e-10!34;UBERON:0002780!2.87e-10!41;UBERON:0001890!2.87e-10!41;UBERON:0006240!2.87e-10!41;UBERON:0002791!1.15e-09!33;UBERON:0001869!1.25e-08!32;UBERON:0003056!9.67e-08!61;UBERON:0002619!2.00e-07!22;UBERON:0001950!7.80e-07!20;UBERON:0000153!8.73e-07!129;UBERON:0007811!8.73e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.66e-13;8!UBERON:0005795;3.26e-12;1!UBERON:0003135;7.97e-10;11!UBERON:0000991;7.05e-09;21!UBERON:0000922;3.19e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.71e-13,8;UBERON:0003135,8.10e-10,11;UBERON:0000991,7.12e-09,21;UBERON:0009196,7.12e-09,21;UBERON:0009117,7.12e-09,21;UBERON:0005564,7.12e-09,21;UBERON:0004176,1.77e-08,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29208379584664,0,0.66944122552934,0,0,0,0.735326160691737,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,2.07355300420312,2.51806559810822,1.39432731443422,0.932949495138334,2.52320850875628,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0,2.32991899054908,0,0,0,0,0,0,0.681017030557878,1.28602518772015,1.92555211236127,3.32352270423348,0,0,0.303747783290123,0.335434687599266,0.0788057072991982,0.367182116944987,0,0.717149357331379,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0.342173675768659,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.1251909307065,1.72022758707021,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0.314231179832004,0.560544326627578,0,0,0,0.285906176706625,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.588925401344836,0,0.8453114551668,0,0,0,0.799529247399431,0,0,0,0,0,0.286679166302903,0.157771562193185,0.271965960763659,0,0,0,0,0,5.67748911757855,0.874124575709564,0.126698501011437,0.407955318967927,2.13773924212448,2.6649520865105,3.0084904715085,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0,0.248298857183432,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,1.22068853494722,0,0.201273793591026,0 | |||
|short_description=p@chr10:21581922..21581939,- | |||
}} |
Latest revision as of 12:31, 23 July 2015
Short description: | p@chr10:21581922..21581939, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21581922..21581939, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.05e-35 | 5 |
neuron | 3.14e-17 | 6 |
neuroblast | 3.14e-17 | 6 |
electrically signaling cell | 3.14e-17 | 6 |
germ line cell | 4.17e-15 | 7 |
germ cell | 4.17e-15 | 7 |
neuronal stem cell | 4.46e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 2.71e-13 | 8 |
male reproductive organ | 8.10e-10 | 11 |
gonad | 7.12e-09 | 21 |
indifferent external genitalia | 7.12e-09 | 21 |
indifferent gonad | 7.12e-09 | 21 |
gonad primordium | 7.12e-09 | 21 |
external genitalia | 1.77e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.77e-08 | 22 |
germ cell cancer | 1.77e-08 | 22 |