FFCP PHASE1:Hg19::chr10:106005679..106005686,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:106005679..106005686,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:106005679..106005686,+ | |||
|id=chr10:106005679..106005686,+ | |||
|ontology_enrichment_celltype=CL:0000860!6.07e-92!45;CL:0002057!1.24e-90!42;CL:0002194!1.74e-69!63;CL:0000576!1.74e-69!63;CL:0000040!1.74e-69!63;CL:0000559!1.74e-69!63;CL:0002009!6.17e-67!65;CL:0000766!1.00e-63!76;CL:0000839!3.43e-61!70;CL:0000557!3.88e-60!71;CL:0000763!4.63e-44!112;CL:0000049!4.63e-44!112;CL:0002087!8.44e-44!119;CL:0000738!1.04e-41!140;CL:0002031!2.57e-36!124;CL:0000037!5.56e-35!172;CL:0000566!5.56e-35!172;CL:0000988!1.74e-33!182;CL:0002032!1.77e-31!165;CL:0000837!1.77e-31!165;CL:0002393!7.79e-19!9;CL:0002397!7.79e-19!9;CL:0000134!4.69e-10!358;CL:0002320!1.46e-09!365;CL:0000219!8.14e-09!390;CL:0000767!1.07e-07!3;CL:0000875!2.60e-07!3;CL:0002396!2.60e-07!3;CL:0000842!8.92e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.37e-135;33!CL:0002057;6.37e-135;33!CL:0000473;2.71e-93;39!CL:0000234;2.71e-93;39!CL:0000576;1.97e-73;48!CL:0000766;1.92e-47;69!CL:0000763;2.69e-21;100!CL:0002087;4.04e-18;104!CL:0000738;6.48e-12;136!CL:0000767;3.63e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-139,42;CL:0002057,1.82e-139,42;CL:0000473,2.62e-121,48;CL:0000234,2.62e-121,48;CL:0002194,7.03e-96,59;CL:0000576,7.03e-96,59;CL:0000040,7.03e-96,59;CL:0000559,7.03e-96,59;CL:0002009,1.35e-92,61;CL:0000766,6.05e-88,72;CL:0000839,3.01e-85,66;CL:0000557,6.58e-84,67;CL:0000763,6.42e-57,108;CL:0000049,6.42e-57,108;CL:0002087,1.02e-46,115;CL:0002031,1.54e-44,120;CL:0000738,4.82e-44,136;CL:0002032,2.67e-36,161;CL:0000837,2.67e-36,161;CL:0000037,1.54e-34,168;CL:0000988,1.76e-32,177;CL:0000134,4.02e-13,354;CL:0002320,9.62e-13,361;CL:0000219,2.09e-11,386;CL:0000048,9.11e-10,427;CL:0000723,1.53e-09,433;CL:0000034,3.01e-09,441;CL:0000767,3.37e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-103;42!CL:0000049;9.22e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.72e-52!80;UBERON:0001474!2.89e-47!86;UBERON:0002390!3.12e-47!102;UBERON:0003061!3.12e-47!102;UBERON:0002193!2.07e-43!112;UBERON:0004765!3.30e-38!101;UBERON:0001434!3.30e-38!101;UBERON:0002405!1.85e-36!115;UBERON:0002204!8.17e-19!167;UBERON:0003081!2.58e-16!216;UBERON:0002384!6.84e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.07e-73,76;UBERON:0001474,1.13e-67,82;UBERON:0004765,3.35e-61,90;UBERON:0002405,4.66e-59,93;UBERON:0002390,8.98e-56,98;UBERON:0003061,8.98e-56,98;UBERON:0001434,1.50e-54,100;UBERON:0002193,4.18e-50,108;UBERON:0002204,2.25e-30,167;UBERON:0003081,6.34e-24,203;UBERON:0000926,3.24e-13,315;UBERON:0004120,3.24e-13,315;UBERON:0006603,3.24e-13,315;UBERON:0002384,3.17e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90046415273356,0.767658796194425,3.56077083626975,0,0,0,0,0,0,0.553995408531877,2.20598892217156,1.08505435357926,0,0,0,3.48955773070955,4.91238726795452,3.15359279544161,17.4321777679263,19.7360586250476,24.7765096716083,25.3169305243492,25.6160706529101,20.1009895405297,40.3352446461844,36.7926269642781,44.6907405761328,8.65914761895982,5.18521685109907,8.09004544002305,113.251040177234,66.4323086047514,64.5730497057032,2.63881040149373,2.59302754908121,3.40979800426155,63.8460324982885,34.0431134814684,21.1759564658495,20.6023905510529,19.2948679815475,24.5423394516782,31.4807741369352,57.4513112140601,42.7224223045194,0.845021145247767,0.850417199860174,0.419317291016752,0.786300418025466,0.150176892841506,0.16072558669708,1.71007646244749,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,19.0910742656406,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.387025325156341,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.460935950223117,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:106005679..106005686,+ | |||
}} |
Latest revision as of 10:07, 23 July 2015
Short description: | p@chr10:106005679..106005686, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:106005679..106005686, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.82e-139 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-139 | 42 |
defensive cell | 2.62e-121 | 48 |
phagocyte | 2.62e-121 | 48 |
monopoietic cell | 7.03e-96 | 59 |
monocyte | 7.03e-96 | 59 |
monoblast | 7.03e-96 | 59 |
promonocyte | 7.03e-96 | 59 |
macrophage dendritic cell progenitor | 1.35e-92 | 61 |
myeloid leukocyte | 6.05e-88 | 72 |
myeloid lineage restricted progenitor cell | 3.01e-85 | 66 |
granulocyte monocyte progenitor cell | 6.58e-84 | 67 |
myeloid cell | 6.42e-57 | 108 |
common myeloid progenitor | 6.42e-57 | 108 |
nongranular leukocyte | 1.02e-46 | 115 |
hematopoietic lineage restricted progenitor cell | 1.54e-44 | 120 |
leukocyte | 4.82e-44 | 136 |
hematopoietic oligopotent progenitor cell | 2.67e-36 | 161 |
hematopoietic multipotent progenitor cell | 2.67e-36 | 161 |
hematopoietic stem cell | 1.54e-34 | 168 |
hematopoietic cell | 1.76e-32 | 177 |
mesenchymal cell | 4.02e-13 | 354 |
connective tissue cell | 9.62e-13 | 361 |
motile cell | 2.09e-11 | 386 |
multi fate stem cell | 9.11e-10 | 427 |
somatic stem cell | 1.53e-09 | 433 |
stem cell | 3.01e-09 | 441 |
basophil | 3.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.07e-73 | 76 |
bone element | 1.13e-67 | 82 |
skeletal element | 3.35e-61 | 90 |
immune system | 4.66e-59 | 93 |
hematopoietic system | 8.98e-56 | 98 |
blood island | 8.98e-56 | 98 |
skeletal system | 1.50e-54 | 100 |
hemolymphoid system | 4.18e-50 | 108 |
musculoskeletal system | 2.25e-30 | 167 |
lateral plate mesoderm | 6.34e-24 | 203 |
mesoderm | 3.24e-13 | 315 |
mesoderm-derived structure | 3.24e-13 | 315 |
presumptive mesoderm | 3.24e-13 | 315 |
connective tissue | 3.17e-12 | 371 |