FFCP PHASE1:Hg19::chr10:105880052..105880071,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:105880052..105880071,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:105880052..105880071,- | |||
|id=chr10:105880052..105880071,- | |||
|ontology_enrichment_celltype=CL:0002057!9.32e-84!42;CL:0000860!8.84e-78!45;CL:0000766!1.69e-61!76;CL:0002194!4.69e-57!63;CL:0000576!4.69e-57!63;CL:0000040!4.69e-57!63;CL:0000559!4.69e-57!63;CL:0002009!3.84e-55!65;CL:0000839!7.89e-51!70;CL:0000557!4.88e-50!71;CL:0000738!7.46e-40!140;CL:0000763!8.41e-40!112;CL:0000049!8.41e-40!112;CL:0002087!1.55e-34!119;CL:0000037!3.47e-31!172;CL:0000566!3.47e-31!172;CL:0000988!4.26e-29!182;CL:0002031!2.36e-28!124;CL:0002032!8.19e-27!165;CL:0000837!8.19e-27!165;CL:0000767!3.31e-15!3;CL:0000134!2.58e-11!358;CL:0002320!5.85e-11!365;CL:0000094!5.64e-10!8;CL:0000219!1.05e-09!390;CL:0000034!2.62e-09!444;CL:0002393!4.30e-09!9;CL:0002397!4.30e-09!9;CL:0000048!3.35e-08!430;CL:0000723!5.49e-08!436;CL:0000842!2.13e-07!3;CL:0000784!2.20e-07!3;CL:0000081!2.79e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-82;33!CL:0002057;1.39e-82;33!CL:0000473;2.23e-56;39!CL:0000234;2.23e-56;39!CL:0000576;1.84e-46;48!CL:0000766;8.95e-32;69!CL:0002087;5.21e-17;104!CL:0002393;8.49e-13;6!CL:0002397;8.49e-13;6!CL:0000763;1.79e-12;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-92,42;CL:0002057,1.47e-92,42;CL:0000473,1.34e-80,48;CL:0000234,1.34e-80,48;CL:0002194,7.58e-64,59;CL:0000576,7.58e-64,59;CL:0000040,7.58e-64,59;CL:0000559,7.58e-64,59;CL:0002009,1.10e-61,61;CL:0000839,7.67e-57,66;CL:0000557,5.86e-56,67;CL:0000766,6.64e-52,72;CL:0000763,1.13e-33,108;CL:0000049,1.13e-33,108;CL:0002087,1.94e-31,115;CL:0002031,5.31e-30,120;CL:0000738,4.22e-26,136;CL:0002032,1.52e-21,161;CL:0000837,1.52e-21,161;CL:0000037,1.66e-20,168;CL:0000988,2.70e-19,177;CL:0002393,1.12e-08,9;CL:0002397,1.12e-08,9;CL:0000134,7.31e-08,354;CL:0002320,1.23e-07,361;CL:0000034,3.01e-07,441;CL:0000219,7.64e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.56e-66;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.46e-44!80;UBERON:0001474!2.35e-40!86;UBERON:0002390!1.74e-38!102;UBERON:0003061!1.74e-38!102;UBERON:0002193!1.64e-34!112;UBERON:0004765!1.61e-33!101;UBERON:0001434!1.61e-33!101;UBERON:0002405!9.88e-29!115;UBERON:0002204!6.19e-18!167;UBERON:0003081!7.01e-15!216;UBERON:0002384!1.79e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.86e-49,76;UBERON:0001474,2.93e-45,82;UBERON:0004765,5.43e-41,90;UBERON:0002405,1.41e-39,93;UBERON:0002390,2.06e-37,98;UBERON:0003061,2.06e-37,98;UBERON:0001434,1.32e-36,100;UBERON:0002193,1.13e-33,108;UBERON:0002204,1.19e-20,167;UBERON:0003081,2.18e-16,203;UBERON:0000926,2.70e-09,315;UBERON:0004120,2.70e-09,315;UBERON:0006603,2.70e-09,315;UBERON:0002384,2.49e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,2.76997704265939,1.00272223735071,1.30206522429511,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,1.23350366406548,1.85823822537062,3.16461631554365,2.0492856522328,6.3850202069918,15.5135556331478,14.2006630388442,9.47985406160392,0,0.545812300115692,1.34834090667051,18.977201326996,23.7487480036309,32.6061934157511,0,0,0,11.0279510678862,11.9150897185139,23.0444232128363,0,0,1.08594422352558,3.63239701580021,19.8869923433285,37.3425617180244,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:105880052..105880071,- | |||
}} |
Latest revision as of 10:06, 23 July 2015
Short description: | p@chr10:105880052..105880071, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105880052..105880071, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-92 | 42 |
defensive cell | 1.34e-80 | 48 |
phagocyte | 1.34e-80 | 48 |
monopoietic cell | 7.58e-64 | 59 |
monocyte | 7.58e-64 | 59 |
monoblast | 7.58e-64 | 59 |
promonocyte | 7.58e-64 | 59 |
macrophage dendritic cell progenitor | 1.10e-61 | 61 |
myeloid lineage restricted progenitor cell | 7.67e-57 | 66 |
granulocyte monocyte progenitor cell | 5.86e-56 | 67 |
myeloid leukocyte | 6.64e-52 | 72 |
myeloid cell | 1.13e-33 | 108 |
common myeloid progenitor | 1.13e-33 | 108 |
nongranular leukocyte | 1.94e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 5.31e-30 | 120 |
leukocyte | 4.22e-26 | 136 |
hematopoietic oligopotent progenitor cell | 1.52e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-21 | 161 |
hematopoietic stem cell | 1.66e-20 | 168 |
hematopoietic cell | 2.70e-19 | 177 |
intermediate monocyte | 1.12e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.12e-08 | 9 |
mesenchymal cell | 7.31e-08 | 354 |
connective tissue cell | 1.23e-07 | 361 |
stem cell | 3.01e-07 | 441 |
motile cell | 7.64e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.86e-49 | 76 |
bone element | 2.93e-45 | 82 |
skeletal element | 5.43e-41 | 90 |
immune system | 1.41e-39 | 93 |
hematopoietic system | 2.06e-37 | 98 |
blood island | 2.06e-37 | 98 |
skeletal system | 1.32e-36 | 100 |
hemolymphoid system | 1.13e-33 | 108 |
musculoskeletal system | 1.19e-20 | 167 |
lateral plate mesoderm | 2.18e-16 | 203 |
mesoderm | 2.70e-09 | 315 |
mesoderm-derived structure | 2.70e-09 | 315 |
presumptive mesoderm | 2.70e-09 | 315 |
connective tissue | 2.49e-07 | 371 |