FFCP PHASE1:Hg19::chr7:98822527..98822533,+: Difference between revisions
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|id=chr7:98822527..98822533,+
|short_description=p@chr7:98822527..98822533,+
|description=CAGE_peak_at_chr7:98822527..98822533,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:98822527..98822533,+ | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr7:98822527..98822533,+ | |||
|id=chr7:98822527..98822533,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.51e-10!254;CL:0002251!4.50e-08!21;CL:0002076!6.31e-08!43;CL:0002621!7.28e-08!3;CL:0000068!1.09e-07!3;CL:0000069!1.09e-07!3;CL:0000307!1.09e-07!3;CL:0000377!1.09e-07!3;CL:0002178!1.38e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002621;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.85e-20!106;DOID:1749!2.61e-17!14;DOID:0050687!1.50e-16!143;DOID:3493!3.33e-11!2;DOID:299!2.52e-09!25;DOID:162!6.87e-08!235;DOID:14566!1.29e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4929;5.48e-18;2!DOID:3493;9.86e-18;2!DOID:299;1.18e-12;25!DOID:1749;1.85e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,5.48e-18,2;DOID:3493,9.07e-18,2;DOID:299,1.09e-12,25;DOID:1749,1.99e-10,14;DOID:305,3.05e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000161!1.71e-12!35;UBERON:0001007!1.31e-10!155;UBERON:0001555!1.31e-10!155;UBERON:0007026!1.31e-10!155;UBERON:0000077!1.27e-09!130;UBERON:0004119!2.40e-09!169;UBERON:0000925!2.40e-09!169;UBERON:0006595!2.40e-09!169;UBERON:0000162!9.63e-09!14;UBERON:0001353!9.63e-09!14;UBERON:0000163!9.63e-09!14;UBERON:0006866!9.63e-09!14;UBERON:0000164!9.63e-09!14;UBERON:0000931!9.63e-09!14;UBERON:0004122!3.84e-08!15;UBERON:0001949!7.28e-08!3;UBERON:0002110!1.06e-07!3;UBERON:0006242!1.06e-07!3;UBERON:0001723!1.53e-07!3;UBERON:0001033!1.53e-07!3;UBERON:0010056!1.53e-07!3;UBERON:0004921!2.27e-07!129;UBERON:0004185!2.27e-07!129;UBERON:0002294!3.10e-07!7;UBERON:0001173!3.10e-07!7;UBERON:0004912!3.10e-07!7;UBERON:0003126!7.17e-07!7;UBERON:0001005!7.17e-07!7;UBERON:0004913!7.49e-07!1;UBERON:0003703!7.49e-07!1;UBERON:0001174!7.49e-07!1;UBERON:0004914!7.49e-07!1;UBERON:0000997!7.90e-07!1;UBERON:0005056!7.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.84e-34;1!UBERON:0003703;1.84e-34;1!UBERON:0001174;1.84e-34;1!UBERON:0004914;1.84e-34;1!UBERON:0000997;2.58e-34;1!UBERON:0005056;2.58e-34;1!UBERON:0004176;2.58e-34;1!UBERON:0002114;1.85e-12;2!UBERON:0001949;2.74e-12;3!UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4!UBERON:0002108;5.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.84e-34,1;UBERON:0003703,1.84e-34,1;UBERON:0001174,1.84e-34,1;UBERON:0004914,1.84e-34,1;UBERON:0000997,2.58e-34,1;UBERON:0005056,2.58e-34,1;UBERON:0002114,1.85e-12,2;UBERON:0001949,2.89e-12,3;UBERON:0002108,5.35e-08,4;UBERON:0002394,7.17e-07,6;UBERON:0003928,7.17e-07,6 | |||
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|short_description=p@chr7:98822527..98822533,+ | |||
}} | }} |
Latest revision as of 13:08, 31 July 2015
Short description: | p@chr7:98822527..98822533, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:98822527..98822533, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.84e-34 | 1 |
extrahepatic bile duct | 1.84e-34 | 1 |
common bile duct | 1.84e-34 | 1 |
duodenal papilla | 1.84e-34 | 1 |
mammalian vulva | 2.58e-34 | 1 |
external female genitalia | 2.58e-34 | 1 |
duodenum | 1.85e-12 | 2 |
gingival epithelium | 2.89e-12 | 3 |
small intestine | 5.35e-08 | 4 |
bile duct | 7.17e-07 | 6 |
digestive system duct | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.48e-18 | 2 |
signet ring cell adenocarcinoma | 9.07e-18 | 2 |
adenocarcinoma | 1.09e-12 | 25 |
squamous cell carcinoma | 1.99e-10 | 14 |
carcinoma | 3.05e-08 | 106 |