FFCP PHASE1:Hg19::chr7:96747044..96747055,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:96747044..96747055,+
|short_description=p3@ACN9
|description=CAGE_peak_3_at_ACN9_5end
|association_with_transcript=31bp_to_ENST00000489852_5end
|EntrezGen...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57001 | |EntrezGene=57001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21752 | |HGNC=21752 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000489852_5end | |||
|cluster_id=chr7:96747044..96747055,+ | |||
|coexpression_cluster_id=C2909 | |||
|description=CAGE_peak_3_at_ACN9_5end | |||
|id=chr7:96747044..96747055,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.69e-10,177;CL:0000037,3.91e-09,168;CL:0002032,2.36e-08,161;CL:0000837,2.36e-08,161;CL:0000542,2.98e-07,53;CL:0000051,2.98e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.81e-24!235;DOID:14566!7.51e-24!239;DOID:2531!3.03e-21!51;DOID:0060083!3.03e-21!51;DOID:1240!1.37e-16!39;DOID:0050686!2.31e-16!137;DOID:8692!1.59e-13!31;DOID:0050687!2.50e-11!143;DOID:305!1.06e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.14e-24;31!DOID:1240;9.04e-24;39!DOID:2531;6.49e-23;51!DOID:0060083;6.49e-23;51!DOID:1036;2.95e-12;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.71e-37,51;DOID:0060083,3.71e-37,51;DOID:1240,2.26e-29,39;DOID:162,1.31e-26,235;DOID:14566,1.72e-25,239;DOID:8692,2.78e-25,31;DOID:0050686,1.05e-20,137;DOID:1036,2.89e-12,8;DOID:0050687,7.60e-08,143;DOID:305,4.42e-07,106;DOID:0060058,5.50e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@ACN9 | |||
}} | }} |
Latest revision as of 06:20, 20 September 2015
Short description: | p3@ACN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACN9_5end |
Coexpression cluster: | C2909_lymphoma_adenocarcinoma_chronic_acute_diffuse_nonsmall_CD19 |
Association with transcript: | 31bp_to_ENST00000489852_5end |
EntrezGene: | ACN9 |
HGNC: | 21752 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.69e-10 | 177 |
hematopoietic stem cell | 3.91e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.36e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-08 | 161 |
lymphocyte | 2.98e-07 | 53 |
common lymphoid progenitor | 2.98e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.71e-37 | 51 |
immune system cancer | 3.71e-37 | 51 |
leukemia | 2.26e-29 | 39 |
cancer | 1.31e-26 | 235 |
disease of cellular proliferation | 1.72e-25 | 239 |
myeloid leukemia | 2.78e-25 | 31 |
organ system cancer | 1.05e-20 | 137 |
chronic leukemia | 2.89e-12 | 8 |
cell type cancer | 7.60e-08 | 143 |
carcinoma | 4.42e-07 | 106 |
lymphoma | 5.50e-07 | 10 |