FFCP PHASE1:Hg19::chr7:45957011..45957025,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:45957011..45957025,-
|short_description=p15@IGFBP3
|description=CAGE_peak_15_at_IGFBP3_5end
|association_with_transcript=-15bp_to_ENST00000428530_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000428530_5end | |||
|cluster_id=chr7:45957011..45957025,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_15_at_IGFBP3_5end | |||
|id=chr7:45957011..45957025,- | |||
|ontology_enrichment_celltype=CL:0000057!1.01e-08!75;CL:0000499!7.58e-08!27;CL:0002620!2.03e-07!23;CL:0000153!6.28e-07!9;CL:0000447!6.28e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000153;5.35e-17;9!CL:0000447;5.35e-17;9!CL:0002620;4.30e-16;23!CL:0000138;6.42e-14;6!CL:0000327;1.46e-12;15!CL:0002595;2.21e-10;5!CL:0000499;1.77e-09;28!CL:0002537;2.33e-09;5!CL:0002589;5.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,5.37e-17,9;CL:0000447,5.37e-17,9;CL:0002620,3.14e-16,23;CL:0000058,6.44e-14,6;CL:0000138,6.44e-14,6;CL:0000057,4.15e-13,76;CL:0000327,1.36e-12,15;CL:0002595,1.90e-10,5;CL:0000499,1.68e-09,28;CL:0002537,1.91e-09,5;CL:0002589,4.59e-07,2;CL:0000048,5.72e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.59e-14;5!DOID:450;1.59e-14;5!DOID:66;1.59e-14;5!DOID:423;1.59e-14;5!DOID:0080000;1.59e-14;5!DOID:11722;1.59e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.39e-14,5;DOID:450,1.39e-14,5;DOID:66,1.39e-14,5;DOID:423,1.39e-14,5;DOID:0080000,1.39e-14,5;DOID:11722,1.39e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.66e-10!14;UBERON:0000158!1.66e-10!14;UBERON:0004871!5.97e-08!8;UBERON:0004923!8.30e-08!57;UBERON:0000478!1.37e-07!24;UBERON:0000305!5.01e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.21e-10;5!UBERON:0001533;2.21e-10;5!UBERON:0005631;1.09e-09;10!UBERON:0000158;1.09e-09;10!UBERON:0002097;3.40e-09;41!UBERON:0004457;4.70e-08;9!UBERON:0000042;4.70e-08;9!UBERON:0002199;1.50e-07;46!UBERON:0002416;1.50e-07;46!UBERON:0003513;2.13e-07;7!UBERON:0001529;5.65e-07;2!UBERON:0007204;5.65e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.80e-11,41;UBERON:0002199,6.03e-11,46;UBERON:0002416,6.03e-11,46;UBERON:0003834,1.90e-10,5;UBERON:0001533,1.90e-10,5;UBERON:0005631,5.60e-09,14;UBERON:0000158,5.60e-09,14;UBERON:0004871,9.41e-09,8;UBERON:0003513,1.92e-07,7;UBERON:0001529,4.59e-07,2;UBERON:0007204,4.59e-07,2;UBERON:0000305,9.50e-07,7 | |||
|phase1_expression=0.363356758541113,3.42560838225573,2.25527046553554,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,28.9151321907653,22.0588680679791,14.3398053771215,6.36228757640879,15.0856809793817,0,0.443458794925128,0.263504357079378,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,0.573673241497627,0,1.68203280042692,1.06748995729705,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,1.22595118319608,0.150238058906597,0,2.33206526395521,1.70845911054854,2.11931901159562,3.30100205692843,2.67936576019941,1.28820270022815,5.76962254627928,0.675105328965065,1.94874010322397,4.29137416214995,3.40584624976508,0,7.10019185033229,4.83610071492673,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0.258543431515556,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0.718874566474748,0,0,0.868687840005475,0.61642896765115,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,1.24900292158013,0.315404830067869,0.702848489956279,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0.30239029332968,2.72918588600655,0.460385919864187,3.08726103876381,0.768834895534206,3.07024349440022,0.482561763430822,0,0,1.24293207719189,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,2.51849877464512,0.6970372701606,0,0,0,1.66791797193528,8.01499365755151,0,0,0,0,0,0,2.35484592059769,0,0,0,0.202182481573316,0,0,0,0.243713489631284,3.16950440270266,0,0,1.13008116620243,2.75682671773062,5.97095077717098,16.2226827543892,0,0,0,0,0,0,0,0.7133421029625,0,4.01104507065562,2.63435914367922,0,0,0,0.670302275535787,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,1.90995587790152,1.48482340416319,3.68592842519078,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,11.8195043311487,0,0,0,0.295930216910801,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,1.91400695839152,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.694238953340524,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,3.19695375331408,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,3.96329871896644,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,2.034148301238,2.71499800876856,0.864221491201268,0.326587360109409,0,0,0,0,0.439656701034247,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0.233713309847224,0,0.189403005275089,0,5.33886732957922,0,0.604923695052956,0.466311601748341,0,0,0,0,0.414706207840855,0,0,0.150257608997218,1.14241563650639,0,0.181848659202559,0,2.32016879939247,1.19428766609585,0,0.343395705182793,0,0,0,0,0,0.906823702049089,0,0,2.68633261622231,0.926404341482917,0,0,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0.636008701306837,0,0,0,0.6124909547064,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0.693153996902029,0,0,0,0.0752103283492573,0.60511520611056,0,0,0.163771917510097,0,0,0.781078098613847,0,0,0,0,0,0,1.53314913167514,0,0,0,0.227662191351298,1.06442844195167,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,3.88669664193519,5.25526856675755,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,4.07825075250761,0.0939839179798536,0,0,1.07132363163395,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0.371995018166751,4.15958065768276,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.639701945702943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| ||
|short_description=p15@IGFBP3 | |||
}} | }} |
Latest revision as of 19:56, 18 September 2015
Short description: | p15@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -15bp_to_ENST00000428530_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 5.37e-17 | 9 |
carbohydrate secreting cell | 5.37e-17 | 9 |
skin fibroblast | 3.14e-16 | 23 |
chondroblast | 6.44e-14 | 6 |
chondrocyte | 6.44e-14 | 6 |
fibroblast | 4.15e-13 | 76 |
extracellular matrix secreting cell | 1.36e-12 | 15 |
smooth muscle cell of the subclavian artery | 1.90e-10 | 5 |
stromal cell | 1.68e-09 | 28 |
amnion mesenchymal stem cell | 1.91e-09 | 5 |
smooth muscle cell of the brachiocephalic vasculature | 4.59e-07 | 2 |
multi fate stem cell | 5.72e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.80e-11 | 41 |
integument | 6.03e-11 | 46 |
integumental system | 6.03e-11 | 46 |
thoracic segment blood vessel | 1.90e-10 | 5 |
subclavian artery | 1.90e-10 | 5 |
extraembryonic membrane | 5.60e-09 | 14 |
membranous layer | 5.60e-09 | 14 |
somatic layer of lateral plate mesoderm | 9.41e-09 | 8 |
trunk blood vessel | 1.92e-07 | 7 |
brachiocephalic artery | 4.59e-07 | 2 |
brachiocephalic vasculature | 4.59e-07 | 2 |
amnion | 9.50e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.39e-14 | 5 |
myotonic disease | 1.39e-14 | 5 |
muscle tissue disease | 1.39e-14 | 5 |
myopathy | 1.39e-14 | 5 |
muscular disease | 1.39e-14 | 5 |
myotonic dystrophy | 1.39e-14 | 5 |