FFCP PHASE1:Hg19::chr7:45952575..45952582,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:45952575..45952582,-
|short_description=p26@IGFBP3
|description=CAGE_peak_26_at_IGFBP3_5end
|association_with_transcript=44bp_to_AF370418_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC0 | |UniProt=Q71RC0 | ||
|association_with_transcript=44bp_to_AF370418_5end | |||
|cluster_id=chr7:45952575..45952582,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_26_at_IGFBP3_5end | |||
|id=chr7:45952575..45952582,- | |||
|ontology_enrichment_celltype=CL:0000057!2.93e-12!75;CL:0002620!4.02e-12!23;CL:0000055!2.50e-10!180;CL:0002334!3.96e-09!12;CL:0000499!1.78e-08!27;CL:0000153!1.54e-07!9;CL:0000447!1.54e-07!9;CL:0000515!2.94e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000153;3.03e-19;9!CL:0000447;3.03e-19;9!CL:0000138;4.05e-19;6!CL:0000327;4.37e-16;15!CL:0000499;1.55e-14;28!CL:0002620;2.57e-13;23!CL:0002595;1.10e-12;5!CL:0000135;5.86e-10;3!CL:0000388;5.86e-10;3!CL:0000228;6.40e-08;1!CL:0002372;6.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.43e-19,9;CL:0000447,2.43e-19,9;CL:0000058,3.98e-19,6;CL:0000138,3.98e-19,6;CL:0000327,4.32e-16,15;CL:0000499,1.31e-14,28;CL:0002620,2.34e-13,23;CL:0002595,1.52e-12,5;CL:0000057,2.41e-10,76;CL:0000135,4.00e-10,3;CL:0000388,4.00e-10,3;CL:0000228,5.79e-08,1;CL:0002372,5.79e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.38e-09!5;DOID:450!3.38e-09!5;DOID:66!3.38e-09!5;DOID:423!3.38e-09!5;DOID:0080000!3.38e-09!5;DOID:11722!3.38e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;2.90e-08;1!DOID:3571;6.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.71e-08,1;DOID:3571,9.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.53e-07!40;UBERON:0002199!4.06e-07!45;UBERON:0002416!4.06e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.10e-12;5!UBERON:0001533;1.10e-12;5!UBERON:0007846;5.86e-10;3!UBERON:0000043;5.86e-10;3!UBERON:0007845;5.86e-10;3!UBERON:0003513;3.33e-09;7!UBERON:0002097;3.59e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.52e-12,5;UBERON:0001533,1.52e-12,5;UBERON:0007846,4.00e-10,3;UBERON:0000043,4.00e-10,3;UBERON:0007845,4.00e-10,3;UBERON:0002097,2.65e-09,41;UBERON:0003513,4.18e-09,7;UBERON:0002199,3.60e-08,46;UBERON:0002416,3.60e-08,46 | |||
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|phase1_expression=0.908391896352783,0.642301571672949,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,10.1202962667679,8.52274448081012,6.80778639115871,0,3.89307896242109,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,1.68203280042692,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,1.25572744982203,0.427114777637135,0.847727604638247,1.20036438433761,0.618315175430633,0.515281080091258,1.67505170698431,0.337552664482532,0.292311015483596,1.7670364197088,1.19664868234989,0,3.90510551768276,1.20902517873168,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.868687840005475,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.909382714338778,0,0,0.744323423456331,0.153461973288062,0.841980283299221,0.384417447767103,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,1.05650146756755,0,0,0,0,1.32687795048244,3.5076070820301,0,0,0,0,0,0,0,0.35667105148125,0,0.422215270595328,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0.890894042497916,1.53580351049616,0,0,0,0,0,0,0.276283915531148,0,0,0,2.79935628895627,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,2.55200927785536,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0.999048047910651,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,1.62899880526114,0.864221491201268,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0,0.233713309847224,0,0,1.0062716070103,0.889811221596536,0,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,1.03018711554838,0,0,0,0,0,0.226705925512272,0,0,0,0.617602894321944,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0.913158720509496,0.863710364874486,6.21077194253165,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.679708458751268,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0.743990036333503,1.84870251452567,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p26@IGFBP3 | |||
}} | }} |
Latest revision as of 19:23, 18 September 2015
Short description: | p26@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 44bp_to_AF370418_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | Q71RC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.43e-19 | 9 |
carbohydrate secreting cell | 2.43e-19 | 9 |
chondroblast | 3.98e-19 | 6 |
chondrocyte | 3.98e-19 | 6 |
extracellular matrix secreting cell | 4.32e-16 | 15 |
stromal cell | 1.31e-14 | 28 |
skin fibroblast | 2.34e-13 | 23 |
smooth muscle cell of the subclavian artery | 1.52e-12 | 5 |
fibroblast | 2.41e-10 | 76 |
fibrocyte | 4.00e-10 | 3 |
tendon cell | 4.00e-10 | 3 |
multinucleate cell | 5.79e-08 | 1 |
myotube | 5.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.52e-12 | 5 |
subclavian artery | 1.52e-12 | 5 |
dense regular connective tissue | 4.00e-10 | 3 |
tendon | 4.00e-10 | 3 |
regular connective tissue | 4.00e-10 | 3 |
skin of body | 2.65e-09 | 41 |
trunk blood vessel | 4.18e-09 | 7 |
integument | 3.60e-08 | 46 |
integumental system | 3.60e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.71e-08 | 1 |
liver cancer | 9.29e-08 | 1 |