FFCP PHASE1:Hg19::chr7:37960377..37960389,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:37960377..37960389,+
|short_description=p7@EPDR1
|description=CAGE_peak_7_at_EPDR1_5end
|association_with_transcript=117bp_to_ENST00000423717_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54749 | |EntrezGene=54749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17572 | |HGNC=17572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=117bp_to_ENST00000423717_5end | |||
|cluster_id=chr7:37960377..37960389,+ | |||
|description=CAGE_peak_7_at_EPDR1_5end | |||
|id=chr7:37960377..37960389,+ | |||
|ontology_enrichment_celltype=CL:0000136!6.18e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.60e-14;13!CL:0002579;8.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.44e-14,15;CL:0002579,8.67e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.66e-20!115;UBERON:0000477!4.24e-09!286;UBERON:0000025!1.42e-08!194;UBERON:0001049!6.49e-08!57;UBERON:0005068!6.49e-08!57;UBERON:0006241!6.49e-08!57;UBERON:0007135!6.49e-08!57;UBERON:0005743!9.01e-08!86;UBERON:0004111!1.78e-07!241;UBERON:0001017!1.83e-07!82;UBERON:0000475!1.89e-07!365;UBERON:0003075!4.16e-07!86;UBERON:0007284!4.16e-07!86;UBERON:0002616!5.41e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.14e-12;9!UBERON:0000042;4.14e-12;9!UBERON:0003688;6.29e-11;6!UBERON:0002358;6.29e-11;6!UBERON:0003684;6.29e-11;6!UBERON:0001178;6.29e-11;6!UBERON:0004733;3.70e-10;12!UBERON:0002028;3.70e-10;12!UBERON:0002298;1.70e-09;6!UBERON:0004732;3.27e-09;13!UBERON:0002680;9.78e-07;9!UBERON:0001895;9.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.81e-19,114;UBERON:0003688,1.07e-10,6;UBERON:0002358,1.07e-10,6;UBERON:0003684,1.07e-10,6;UBERON:0001178,1.07e-10,6;UBERON:0004733,5.18e-10,12;UBERON:0002028,5.18e-10,12;UBERON:0007277,5.18e-10,12;UBERON:0002298,2.69e-09,6;UBERON:0004732,4.44e-09,13;UBERON:0004457,1.91e-08,12;UBERON:0000042,1.91e-08,12;UBERON:0003076,1.36e-07,15;UBERON:0003057,1.36e-07,15;UBERON:0010314,2.99e-07,132;UBERON:0002680,9.25e-07,9;UBERON:0001895,9.25e-07,9;UBERON:0010092,9.25e-07,9 | |||
|phase1_expression=4.36028110249336,2.14100523890983,5.92008497203079,1.0007329835313,2.68176656656373,3.48935409640147,2.53299878168311,0.631719873426831,0.783556884599516,0.737201809504527,0.697801167972428,0,0,0,0.331397375727916,0,0,0,1.46379839637152,0.123121058076788,0,0.313454721478088,0.572471974262113,0.410623275218653,0.125542639594803,0.458480434487708,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,1.44846518960824,0,0.486634870302636,0.189069634328136,0,0.087834785693126,1.0478326039817,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,1.49091585508596,1.8994576749687,1.72131935057184,0.286836620748814,1.41867352879343,0.560677600142307,0,1.97334038733728,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0,0,1.18800285728205,0.989067717114227,0,0.718618141816238,0,0,0.277064115484183,0.438977620880838,2.14541457059314,2.25357088359895,1.02088964844019,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0,0,0,0,0.969876340912871,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,1.30727666455444,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,1.96565443335525,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.939269553886573,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.317489471460845,0.381988425558278,1.17217447210047,1.71072446022705,0.308482478109971,0,0.285826432630578,0,1.30788020649984,0.2933531432838,0.258543431515556,0,0.845302752556,3.45719551560332,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,4.52159065589379,2.61460037580088,2.69927076191554,0,1.00451418286425,2.10833939483032,0.239624855491583,0,0,1.73737568001095,0,0.537182889719687,0.224170287987055,0,0,0.128343036279748,0.76228387266739,0,2.31986643833309,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.623912584592421,0.178428988797162,0,0,0.601892199455438,4.5481500811197,0,0,0,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,2.72918588600655,2.30192959932094,2.80660094433074,6.91951405980785,8.18731598506726,5.30817939773905,2.96836132889982,0,0.355123450626254,0.328508624055237,0,0.348631135379878,0,0.40101294060657,0,0,0.728364672026868,1.70461739447251,0,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,1.0457418040996,0.512900250232778,0,0.325378394664303,0.515205058238611,0.183138929636687,0.577566499444116,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0.979352392114111,0.165284915360978,0.576570202095319,0.127612712494584,0.2023155617111,0.464845549297286,0.62962469366128,0.6970372701606,0.616067160352178,3.72614221221915,0,0.74129687641568,0.858749320451947,0,0.632758849437452,0.38126038784765,0,0,1.90921948755562,0.78494864019923,0,0.274537029736055,0,3.43710218674637,4.75530963519025,0.842516912477962,0,2.43713489631284,0,0.136499911407986,0,3.39024349860728,0,4.64407282668854,1.31535265576129,0,0,0.405820753925408,0.6196469961995,0.845086807596724,0,0,0,0,3.37772216476263,2.30506425071931,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0.677167111206413,0,0,0,0,0.614481528616916,0,0.500547425135725,0.586164286206121,0,0,0,0.33307196799782,0,0,0.879049075631364,0.121360521749513,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0.329607748453519,0,2.59022384726391,0.276283915531148,0,0.920418142519393,0.246169610922139,0,0.269605053441981,0.716084698702437,0,0.690503839458535,0,0,0,1.29875337426592,0,0,0,0.724999575434793,0,1.27126825146383,0.236387681767936,0,0.291604613383254,0.347249989866585,0,0.361789315876224,4.5774520895125,3.31737779793674,4.72876190325676,1.53569778007781,0,0.278847488557207,2.23155749661011,0.797594390929008,0,0,0,0.31900115973192,0.366390373607449,0,1.02193298195737,0.31396051279005,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.530745387020035,0.611030144933625,0,0.370691816839509,0.208843899010911,0.876214728748802,7.2231988256891,1.40558667435203,0,0,0,0.394584402849391,0,0.30607276163049,1.13735843331278,0.60129367765797,0.103688191397247,0.664653872707185,0,0.627865836814451,0,0,0,0.173559738335131,0,0,1.92199335066233,2.23581842213102,0.677294319023596,0.438535902517113,0.328461828212837,0.678923115418936,0.0882561266915003,0.90392296312213,0.137041924646751,0,0.949661939338181,0,0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| ||
|short_description=p7@EPDR1 | |||
}} | }} |
Latest revision as of 11:55, 18 September 2015
Short description: | p7@EPDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EPDR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 117bp_to_ENST00000423717_5end |
EntrezGene: | EPDR1 |
HGNC: | 17572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.44e-14 | 15 |
omentum preadipocyte | 8.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.81e-19 | 114 |
omentum | 1.07e-10 | 6 |
peritoneum | 1.07e-10 | 6 |
abdominal cavity | 1.07e-10 | 6 |
visceral peritoneum | 1.07e-10 | 6 |
segmental subdivision of hindbrain | 5.18e-10 | 12 |
hindbrain | 5.18e-10 | 12 |
presumptive hindbrain | 5.18e-10 | 12 |
brainstem | 2.69e-09 | 6 |
segmental subdivision of nervous system | 4.44e-09 | 13 |
cavity lining | 1.91e-08 | 12 |
serous membrane | 1.91e-08 | 12 |
posterior neural tube | 1.36e-07 | 15 |
chordal neural plate | 1.36e-07 | 15 |
structure with developmental contribution from neural crest | 2.99e-07 | 132 |
regional part of metencephalon | 9.25e-07 | 9 |
metencephalon | 9.25e-07 | 9 |
future metencephalon | 9.25e-07 | 9 |