FFCP PHASE1:Hg19::chr7:33945132..33945160,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:33945132..33945160,+
|short_description=p1@BMPER
|description=CAGE_peak_1_at_BMPER_5end
|association_with_transcript=0bp_to_ENST00000436222,ENST00000444773...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=168667 | |EntrezGene=168667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |HGNC=24154 | ||
|TSSclassifier=strong | |||
|UniProt=C9JY72,F8WDG9 | |UniProt=C9JY72,F8WDG9 | ||
|association_with_transcript=0bp_to_ENST00000436222,ENST00000444773_5end | |||
|cluster_id=chr7:33945132..33945160,+ | |||
|coexpression_cluster_id=C4684 | |||
|description=CAGE_peak_1_at_BMPER_5end | |||
|id=chr7:33945132..33945160,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.63e-33!180;CL:0000057!1.48e-22!75;CL:0000359!1.02e-14!32;CL:0000192!1.25e-14!42;CL:0000514!1.25e-14!42;CL:0000680!1.26e-14!57;CL:0000056!1.26e-14!57;CL:0000355!1.26e-14!57;CL:0000187!2.68e-14!54;CL:0000393!5.25e-13!60;CL:0000211!5.25e-13!60;CL:0000183!1.95e-12!59;CL:0002620!4.55e-12!23;CL:0002494!5.53e-09!16;CL:0000222!2.50e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.65e-15;32!CL:0002620;9.30e-13;23!CL:0000192;1.59e-11;43!CL:0002494;6.69e-10;16!CL:0000057;2.88e-09;73!CL:0000187;6.04e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.74e-24,76;CL:0000359,1.93e-16,32;CL:0000192,3.56e-15,43;CL:0000514,3.56e-15,43;CL:0000680,2.43e-13,58;CL:0000056,2.43e-13,58;CL:0000355,2.43e-13,58;CL:0000187,6.10e-13,55;CL:0002620,1.03e-12,23;CL:0000393,3.11e-11,61;CL:0000211,3.11e-11,61;CL:0002494,7.20e-10,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.59e-11;43!CL:0000355;4.09e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.99e-19!83;UBERON:0002329!4.99e-19!83;UBERON:0003077!4.99e-19!83;UBERON:0003059!4.99e-19!83;UBERON:0007282!4.99e-19!83;UBERON:0009618!4.99e-19!83;UBERON:0007285!4.99e-19!83;UBERON:0000475!8.36e-19!365;UBERON:0004290!2.82e-18!70;UBERON:0000486!4.63e-16!82;UBERON:0000025!6.45e-15!194;UBERON:0002385!7.77e-15!63;UBERON:0001015!7.77e-15!63;UBERON:0000383!7.77e-15!63;UBERON:0001134!7.95e-15!61;UBERON:0002036!7.95e-15!61;UBERON:0003082!7.95e-15!61;UBERON:0004872!8.17e-14!84;UBERON:0005256!3.22e-13!143;UBERON:0000481!5.80e-13!347;UBERON:0000483!6.49e-13!309;UBERON:0004111!1.23e-12!241;UBERON:0000119!3.29e-12!312;UBERON:0000468!3.78e-12!659;UBERON:0000477!5.47e-12!286;UBERON:0001637!3.42e-11!42;UBERON:0003509!3.42e-11!42;UBERON:0004572!3.42e-11!42;UBERON:0004573!3.97e-11!33;UBERON:0004571!3.97e-11!33;UBERON:0002199!5.01e-11!45;UBERON:0002416!5.01e-11!45;UBERON:0000948!1.45e-10!24;UBERON:0005498!1.45e-10!24;UBERON:0004140!1.45e-10!24;UBERON:0009881!1.45e-10!24;UBERON:0004141!1.45e-10!24;UBERON:0003084!1.45e-10!24;UBERON:0007005!1.45e-10!24;UBERON:0004139!1.45e-10!24;UBERON:0004291!1.45e-10!24;UBERON:0003914!2.00e-10!118;UBERON:0001981!4.69e-10!60;UBERON:0007500!4.69e-10!60;UBERON:0004537!4.69e-10!60;UBERON:0006965!4.69e-10!60;UBERON:0007100!5.81e-10!27;UBERON:0002100!1.59e-09!216;UBERON:0002097!1.06e-08!40;UBERON:0003102!1.82e-08!95;UBERON:0000467!2.83e-08!625;UBERON:0000055!4.12e-08!69;UBERON:0000480!4.14e-08!626;UBERON:0007023!2.68e-07!115;UBERON:0001135!6.46e-07!15;UBERON:0002049!8.31e-07!79;UBERON:0007798!8.31e-07!79;UBERON:0003104!9.22e-07!238;UBERON:0009142!9.22e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.11e-11;33!UBERON:0004571;2.11e-11;33!UBERON:0000948;1.70e-10;22!UBERON:0001637;8.45e-09;42!UBERON:0003509;8.45e-09;42!UBERON:0004572;8.45e-09;42!UBERON:0007100;3.33e-08;25!UBERON:0002199;3.33e-08;46!UBERON:0002416;3.33e-08;46!UBERON:0002097;2.11e-07;41!UBERON:0003102;4.03e-07;50!UBERON:0001135;5.04e-07;15 | |||
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| ||
|short_description=p1@BMPER | |||
}} | }} |
Latest revision as of 08:34, 18 September 2015
Short description: | p1@BMPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BMPER_5end |
Coexpression cluster: | C4684_Smooth_lung_Fibroblast_mesenchymal_Chondrocyte_basal_mesodermal |
Association with transcript: | 0bp_to_ENST00000436222, ENST00000444773_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | C9JY72F8WDG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.74e-24 | 76 |
vascular associated smooth muscle cell | 1.93e-16 | 32 |
smooth muscle cell | 3.56e-15 | 43 |
smooth muscle myoblast | 3.56e-15 | 43 |
muscle precursor cell | 2.43e-13 | 58 |
myoblast | 2.43e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-13 | 58 |
muscle cell | 6.10e-13 | 55 |
skin fibroblast | 1.03e-12 | 23 |
electrically responsive cell | 3.11e-11 | 61 |
electrically active cell | 3.11e-11 | 61 |
cardiocyte | 7.20e-10 | 16 |