FFCP PHASE1:Hg19::chr7:22766603..22766625,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:22766603..22766625,-
|short_description=p@chr7:22766603..22766625,-
|description=CAGE_peak_at_chr7:22766603..22766625,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:22766603..22766625,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr7:22766603..22766625,- | |||
|id=chr7:22766603..22766625,- | |||
|ontology_enrichment_celltype=CL:0000860!4.32e-10!45;CL:0002057!8.46e-09!42;CL:0000048!9.73e-09!430;CL:0000723!3.24e-08!436;CL:0000034!5.46e-08!444;CL:0000012!1.48e-07!682;CL:0002371!1.49e-07!591;CL:0000144!1.51e-07!625;CL:0000134!2.64e-07!358;CL:0000548!2.81e-07!679;CL:0000004!2.81e-07!679;CL:0000255!2.81e-07!679;CL:0002194!3.90e-07!63;CL:0000576!3.90e-07!63;CL:0000040!3.90e-07!63;CL:0000559!3.90e-07!63;CL:0000057!4.68e-07!75;CL:0002320!5.02e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.53e-25;33!CL:0002057;4.53e-25;33!CL:0000473;7.27e-18;39!CL:0000234;7.27e-18;39!CL:0000576;5.26e-16;48!CL:0000766;1.17e-12;69!CL:0002393;1.56e-10;6!CL:0002397;1.56e-10;6!CL:0002087;2.00e-09;104!CL:0000319;8.40e-08;1!CL:0000763;8.62e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-33,42;CL:0002057,1.13e-33,42;CL:0000473,4.30e-29,48;CL:0000234,4.30e-29,48;CL:0002194,1.12e-22,59;CL:0000576,1.12e-22,59;CL:0000040,1.12e-22,59;CL:0000559,1.12e-22,59;CL:0002009,7.52e-22,61;CL:0000766,9.96e-21,72;CL:0000839,5.37e-20,66;CL:0000557,1.17e-19,67;CL:0002087,1.51e-13,115;CL:0002031,7.60e-13,120;CL:0000763,7.98e-13,108;CL:0000049,7.98e-13,108;CL:0000738,1.86e-12,136;CL:0000988,5.44e-10,177;CL:0002032,5.57e-10,161;CL:0000837,5.57e-10,161;CL:0000037,2.03e-09,168;CL:0000319,8.12e-08,1;CL:0002393,3.43e-07,9;CL:0002397,3.43e-07,9;CL:0000134,3.66e-07,354;CL:0002320,6.24e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;8.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.12e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003081!7.68e-09!216;UBERON:0004872!5.03e-08!84;UBERON:0001637!3.84e-07!42;UBERON:0003509!3.84e-07!42;UBERON:0004572!3.84e-07!42;UBERON:0000926!6.76e-07!448;UBERON:0004120!6.76e-07!448;UBERON:0006603!6.76e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;8.40e-08;1!UBERON:0009842;8.40e-08;1!UBERON:0003704;8.40e-08;1!UBERON:0001171;8.40e-08;1!UBERON:0001172;8.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.19e-17,76;UBERON:0001474,1.45e-15,82;UBERON:0002390,1.72e-14,98;UBERON:0003061,1.72e-14,98;UBERON:0004765,6.19e-14,90;UBERON:0002405,2.15e-13,93;UBERON:0002193,7.21e-13,108;UBERON:0001434,2.92e-12,100;UBERON:0003081,2.29e-09,203;UBERON:0001282,5.79e-08,1;UBERON:0009842,5.79e-08,1;UBERON:0003704,5.79e-08,1;UBERON:0001171,5.79e-08,1;UBERON:0001172,5.79e-08,1 | |||
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| ||
|short_description=p@chr7:22766603..22766625,- | |||
}} | }} |
Latest revision as of 08:36, 31 July 2015
Short description: | p@chr7:22766603..22766625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:22766603..22766625, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-33 | 42 |
defensive cell | 4.30e-29 | 48 |
phagocyte | 4.30e-29 | 48 |
monopoietic cell | 1.12e-22 | 59 |
monocyte | 1.12e-22 | 59 |
monoblast | 1.12e-22 | 59 |
promonocyte | 1.12e-22 | 59 |
macrophage dendritic cell progenitor | 7.52e-22 | 61 |
myeloid leukocyte | 9.96e-21 | 72 |
myeloid lineage restricted progenitor cell | 5.37e-20 | 66 |
granulocyte monocyte progenitor cell | 1.17e-19 | 67 |
nongranular leukocyte | 1.51e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.60e-13 | 120 |
myeloid cell | 7.98e-13 | 108 |
common myeloid progenitor | 7.98e-13 | 108 |
leukocyte | 1.86e-12 | 136 |
hematopoietic cell | 5.44e-10 | 177 |
hematopoietic oligopotent progenitor cell | 5.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.57e-10 | 161 |
hematopoietic stem cell | 2.03e-09 | 168 |
mucus secreting cell | 8.12e-08 | 1 |
intermediate monocyte | 3.43e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.43e-07 | 9 |
mesenchymal cell | 3.66e-07 | 354 |
connective tissue cell | 6.24e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.19e-17 | 76 |
bone element | 1.45e-15 | 82 |
hematopoietic system | 1.72e-14 | 98 |
blood island | 1.72e-14 | 98 |
skeletal element | 6.19e-14 | 90 |
immune system | 2.15e-13 | 93 |
hemolymphoid system | 7.21e-13 | 108 |
skeletal system | 2.92e-12 | 100 |
lateral plate mesoderm | 2.29e-09 | 203 |
intralobular bile duct | 5.79e-08 | 1 |
acinus | 5.79e-08 | 1 |
intrahepatic bile duct | 5.79e-08 | 1 |
portal lobule | 5.79e-08 | 1 |
hepatic acinus | 5.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.12e-08 | 1 |