FFCP PHASE1:Hg19::chr7:150329353..150329364,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:150329353..150329364,-
|short_description=p7@GIMAP6
|description=CAGE_peak_7_at_GIMAP6_5end
|association_with_transcript=17bp_to_ENST00000392862_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=474344 | |EntrezGene=474344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21918 | |HGNC=21918 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000392862_5end | |||
|cluster_id=chr7:150329353..150329364,- | |||
|coexpression_cluster_id=C1092 | |||
|description=CAGE_peak_7_at_GIMAP6_5end | |||
|id=chr7:150329353..150329364,- | |||
|ontology_enrichment_celltype=CL:0000115!6.37e-18!35;CL:0000791!5.67e-17!18;CL:0000789!5.67e-17!18;CL:0002420!5.67e-17!18;CL:0002419!5.67e-17!18;CL:0000790!5.67e-17!18;CL:0002139!8.32e-17!24;CL:0000625!1.48e-14!11;CL:0000071!1.01e-13!18;CL:0002546!1.01e-13!18;CL:0000084!2.48e-13!25;CL:0000827!2.48e-13!25;CL:0002078!1.53e-12!44;CL:1000413!6.01e-09!9;CL:0000213!5.92e-08!57;CL:0000215!5.92e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0000625;5.72e-25;11!CL:0000791;7.82e-23;18!CL:0000789;7.82e-23;18!CL:0002419;7.82e-23;18!CL:0000084;7.20e-16;25!CL:1000413;1.68e-11;9!CL:0002544;2.47e-11;6!CL:0000071;2.10e-10;18!CL:0000815;1.32e-09;2!CL:0000792;1.32e-09;2!CL:0002677;1.32e-09;2!CL:0002139;1.43e-07;24!CL:0000115;3.42e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.12e-25,11;CL:0000791,9.05e-23,18;CL:0000789,9.05e-23,18;CL:0002420,9.05e-23,18;CL:0002419,9.05e-23,18;CL:0000790,9.05e-23,18;CL:0000084,7.98e-16,25;CL:0000827,7.98e-16,25;CL:1000413,1.06e-11,9;CL:0002544,1.60e-11,6;CL:0000071,1.74e-10,18;CL:0002546,1.74e-10,18;CL:0000815,1.58e-09,2;CL:0000792,1.58e-09,2;CL:0002677,1.58e-09,2;CL:0000115,7.79e-08,36;CL:0002139,1.25e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;7.82e-23;18!CL:0002546;2.10e-10;18!UBERON:0005062;6.82e-10;4!UBERON:0007284;6.82e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.92e-42!115;UBERON:0001986!1.01e-13!18;UBERON:0004638!1.01e-13!18;UBERON:0004852!1.01e-13!18;UBERON:0000487!2.26e-10!22;UBERON:0001049!7.92e-10!57;UBERON:0005068!7.92e-10!57;UBERON:0006241!7.92e-10!57;UBERON:0007135!7.92e-10!57;UBERON:0000178!1.66e-09!15;UBERON:0000179!1.66e-09!15;UBERON:0000463!1.66e-09!15;UBERON:0003915!6.01e-09!9;UBERON:0004700!6.01e-09!9;UBERON:0001917!6.01e-09!9;UBERON:0006914!1.36e-08!25;UBERON:0004111!9.10e-08!241;UBERON:0003075!9.56e-08!86;UBERON:0007284!9.56e-08!86;UBERON:0000477!3.43e-07!286;UBERON:0000025!3.86e-07!194;UBERON:0001009!3.92e-07!113;UBERON:0004535!4.07e-07!110;UBERON:0002616!4.49e-07!59;UBERON:0002346!5.15e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.05e-21;15!UBERON:0000179;2.05e-21;15!UBERON:0000463;2.05e-21;15!UBERON:0003978;4.97e-13;3!UBERON:0000946;4.97e-13;3!UBERON:0002390;1.14e-12;32!UBERON:0003915;1.68e-11;9!UBERON:0004700;1.68e-11;9!UBERON:0001917;1.68e-11;9!UBERON:0004638;2.10e-10;18!UBERON:0001986;2.10e-10;18!UBERON:0004852;2.10e-10;18!UBERON:0002133;2.36e-09;2!UBERON:0000487;2.42e-08;22!UBERON:0002193;4.38e-08;42!UBERON:0006914;3.13e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.57e-21,15;UBERON:0000179,1.57e-21,15;UBERON:0000463,1.57e-21,15;UBERON:0003978,5.77e-13,3;UBERON:0009751,5.77e-13,3;UBERON:0000946,5.77e-13,3;UBERON:0002523,5.77e-13,3;UBERON:0005983,5.77e-13,3;UBERON:0002165,5.77e-13,3;UBERON:0002062,5.77e-13,3;UBERON:0007280,5.77e-13,3;UBERON:0003915,1.06e-11,9;UBERON:0004700,1.06e-11,9;UBERON:0001917,1.06e-11,9;UBERON:0004535,1.36e-10,109;UBERON:0004638,1.74e-10,18;UBERON:0001986,1.74e-10,18;UBERON:0004852,1.74e-10,18;UBERON:0001009,3.45e-10,112;UBERON:0002133,2.63e-09,2;UBERON:0000487,2.08e-08,22;UBERON:0006914,2.75e-07,25 | |||
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| ||
|short_description=p7@GIMAP6 | |||
}} | }} |
Latest revision as of 03:34, 17 September 2015
Short description: | p7@GIMAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GIMAP6_5end |
Coexpression cluster: | C1092_Hepatic_CD8_CD4_Endothelial_Renal_lymph_spleen |
Association with transcript: | 17bp_to_ENST00000392862_5end |
EntrezGene: | GIMAP6 |
HGNC: | 21918 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.12e-25 | 11 |
mature alpha-beta T cell | 9.05e-23 | 18 |
alpha-beta T cell | 9.05e-23 | 18 |
immature T cell | 9.05e-23 | 18 |
mature T cell | 9.05e-23 | 18 |
immature alpha-beta T cell | 9.05e-23 | 18 |
T cell | 7.98e-16 | 25 |
pro-T cell | 7.98e-16 | 25 |
endothelial cell of artery | 1.06e-11 | 9 |
aortic endothelial cell | 1.60e-11 | 6 |
blood vessel endothelial cell | 1.74e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.74e-10 | 18 |
regulatory T cell | 1.58e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.58e-09 | 2 |
naive regulatory T cell | 1.58e-09 | 2 |
endothelial cell | 7.79e-08 | 36 |
endothelial cell of vascular tree | 1.25e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
blood | 1.57e-21 | 15 |
haemolymphatic fluid | 1.57e-21 | 15 |
organism substance | 1.57e-21 | 15 |
valve | 5.77e-13 | 3 |
cardiac mesenchyme | 5.77e-13 | 3 |
cardial valve | 5.77e-13 | 3 |
tunica intima | 5.77e-13 | 3 |
heart layer | 5.77e-13 | 3 |
endocardium | 5.77e-13 | 3 |
endocardial cushion | 5.77e-13 | 3 |
presumptive endocardium | 5.77e-13 | 3 |
endothelial tube | 1.06e-11 | 9 |
arterial system endothelium | 1.06e-11 | 9 |
endothelium of artery | 1.06e-11 | 9 |
cardiovascular system | 1.36e-10 | 109 |
blood vessel endothelium | 1.74e-10 | 18 |
endothelium | 1.74e-10 | 18 |
cardiovascular system endothelium | 1.74e-10 | 18 |
circulatory system | 3.45e-10 | 112 |
atrioventricular valve | 2.63e-09 | 2 |
simple squamous epithelium | 2.08e-08 | 22 |
squamous epithelium | 2.75e-07 | 25 |