FFCP PHASE1:Hg19::chr7:131195831..131195842,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:131195831..131195842,-
|short_description=p13@PODXL
|description=CAGE_peak_13_at_PODXL_5end
|association_with_transcript=-174bp_to_ENST00000482581_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5420 | |EntrezGene=5420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |HGNC=9171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-174bp_to_ENST00000482581_5end | |||
|cluster_id=chr7:131195831..131195842,- | |||
|coexpression_cluster_id=C957 | |||
|description=CAGE_peak_13_at_PODXL_5end | |||
|id=chr7:131195831..131195842,- | |||
|ontology_enrichment_celltype=CL:0002322!1.52e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.79e-31;5!CL:0002321;3.96e-10;15!CL:0000540;7.47e-10;6!CL:0000404;7.47e-10;6!CL:0002379;2.42e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.59e-31,5;CL:0000540,8.46e-10,6;CL:0000031,8.46e-10,6;CL:0000404,8.46e-10,6;CL:0000047,1.84e-07,8;CL:0002379,3.62e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;7.47e-10;6!UBERON:0005425;2.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.42e-07;1!DOID:3565;2.42e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.62e-07,1;DOID:3565,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.37e-10!82;UBERON:0007023!1.03e-09!115;UBERON:0005743!1.14e-09!86;UBERON:0001049!2.16e-09!57;UBERON:0005068!2.16e-09!57;UBERON:0006241!2.16e-09!57;UBERON:0007135!2.16e-09!57;UBERON:0000073!1.98e-08!94;UBERON:0001016!1.98e-08!94;UBERON:0000955!3.28e-08!69;UBERON:0006238!3.28e-08!69;UBERON:0002780!1.25e-07!41;UBERON:0001890!1.25e-07!41;UBERON:0006240!1.25e-07!41;UBERON:0002616!2.33e-07!59;UBERON:0003080!2.66e-07!42;UBERON:0002020!2.84e-07!34;UBERON:0003528!2.84e-07!34;UBERON:0002791!9.49e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.42e-07;1!UBERON:0001785;2.42e-07;1!UBERON:0002464;2.42e-07;1!UBERON:0004904;2.42e-07;1!UBERON:0001021;2.42e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-07,1;UBERON:0001785,2.21e-07,1;UBERON:0002464,2.21e-07,1;UBERON:0004904,2.21e-07,1;UBERON:0001021,2.21e-07,1;UBERON:0003902,2.21e-07,1;UBERON:0005425,2.21e-07,1 | |||
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| ||
|short_description=p13@PODXL | |||
}} | }} |
Latest revision as of 10:06, 16 September 2015
Short description: | p13@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PODXL_5end |
Coexpression cluster: | C957_iPS_Fibroblast_teratocarcinoma_mesenchymal_H9_leiomyoma_testicular |
Association with transcript: | -174bp_to_ENST00000482581_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.59e-31 | 5 |
neuron | 8.46e-10 | 6 |
neuroblast | 8.46e-10 | 6 |
electrically signaling cell | 8.46e-10 | 6 |
neuronal stem cell | 1.84e-07 | 8 |
meningothelial cell | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-07 | 1 |
cranial nerve | 2.21e-07 | 1 |
nerve trunk | 2.21e-07 | 1 |
nerve connecting eye with brain | 2.21e-07 | 1 |
nerve | 2.21e-07 | 1 |
retinal neural layer | 2.21e-07 | 1 |
presumptive neural retina | 2.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.62e-07 | 1 |
meningioma | 3.62e-07 | 1 |