FFCP PHASE1:Hg19::chr7:12997533..12997536,+: Difference between revisions
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|id=chr7:12997533..12997536,+
|short_description=p@chr7:12997533..12997536,+
|description=CAGE_peak_at_chr7:12997533..12997536,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:12997533..12997536,+ | |||
|coexpression_cluster_id=C1985 | |||
|description=CAGE_peak_at_chr7:12997533..12997536,+ | |||
|id=chr7:12997533..12997536,+ | |||
|ontology_enrichment_celltype=CL:0002178!2.85e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;4.68e-66;3!CL:0000054;7.14e-26;2!CL:0000137;7.14e-26;2!CL:0000092;7.14e-26;2!CL:0002251;6.00e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.35e-66,3;CL:0000054,9.18e-26,2;CL:0000137,9.18e-26,2;CL:0000092,9.18e-26,2;CL:0002251,5.70e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!4.27e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.99e-50;1!DOID:3165;3.99e-50;1!DOID:0060121;3.99e-50;1!DOID:2438;3.99e-50;1!DOID:4418;3.99e-50;1!DOID:3119;1.63e-32;14!DOID:200;7.14e-26;2!DOID:4305;7.14e-26;2!DOID:0060072;1.13e-13;4!DOID:201;1.44e-09;6!DOID:0060100;1.44e-09;6!DOID:299;5.71e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,6.58e-50,1;DOID:3165,6.58e-50,1;DOID:0060121,6.58e-50,1;DOID:2438,6.58e-50,1;DOID:4418,6.58e-50,1;DOID:3119,1.46e-32,14;DOID:200,9.18e-26,2;DOID:4305,9.18e-26,2;DOID:0060072,1.29e-13,4;DOID:201,1.57e-09,6;DOID:0060100,1.57e-09,6;DOID:299,5.49e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.49e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;8.97e-89;5!UBERON:0010039;8.97e-89;5!UBERON:0001041;1.63e-32;14!UBERON:0005409;3.18e-20;22!UBERON:0000014;1.13e-13;4!UBERON:0004921;1.05e-11;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.57e-56,8;UBERON:0010039,4.57e-56,8;UBERON:0005409,4.90e-18,25;UBERON:0000014,1.29e-13,4 | |||
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| ||
|short_description=p@chr7:12997533..12997536,+ | |||
}} | }} |
Latest revision as of 05:57, 31 July 2015
Short description: | p@chr7:12997533..12997536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:12997533..12997536, + |
Coexpression cluster: | C1985_gastric_signet_lymphangiectasia_Prostate_smallcell_Intestinal_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.35e-66 | 3 |
bone matrix secreting cell | 9.18e-26 | 2 |
osteocyte | 9.18e-26 | 2 |
osteoclast | 9.18e-26 | 2 |
epithelial cell of alimentary canal | 5.70e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 4.57e-56 | 8 |
food storage organ | 4.57e-56 | 8 |
gastrointestinal system | 4.90e-18 | 25 |
zone of skin | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 6.58e-50 | 1 |
skin benign neoplasm | 6.58e-50 | 1 |
integumentary system benign neoplasm | 6.58e-50 | 1 |
dermis tumor | 6.58e-50 | 1 |
cutaneous fibrous histiocytoma | 6.58e-50 | 1 |
gastrointestinal system cancer | 1.46e-32 | 14 |
giant cell tumor | 9.18e-26 | 2 |
bone giant cell tumor | 9.18e-26 | 2 |
benign neoplasm | 1.29e-13 | 4 |
connective tissue cancer | 1.57e-09 | 6 |
musculoskeletal system cancer | 1.57e-09 | 6 |
adenocarcinoma | 5.49e-09 | 25 |