FFCP PHASE1:Hg19::chr7:116199872..116199922,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:116199872..116199922,+
|short_description=p16@CAV1
|description=CAGE_peak_16_at_CAV1_5end
|association_with_transcript=0bp_to_AF070648_5end
|EntrezGene=85...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=857 | |EntrezGene=857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1527 | |HGNC=1527 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AF070648_5end | |||
|cluster_id=chr7:116199872..116199922,+ | |||
|coexpression_cluster_id=C2875 | |||
|description=CAGE_peak_16_at_CAV1_5end | |||
|id=chr7:116199872..116199922,+ | |||
|ontology_enrichment_celltype=CL:0000076!1.30e-08!62;CL:0000220!7.05e-08!246;CL:0000213!7.51e-08!57;CL:0000215!7.51e-08!57;CL:0002139!9.85e-08!24;CL:0000057!1.14e-07!75;CL:0002321!1.50e-07!248;CL:0000222!1.50e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.13e-15;24!CL:0002138;8.24e-12;6!CL:0000115;7.69e-09;36!CL:0000136;1.66e-07;13!CL:0000071;2.11e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.97e-15,24;CL:0005020,5.64e-12,6;CL:0002138,5.64e-12,6;CL:0005022,5.64e-12,6;CL:0000115,2.20e-11,36;CL:0000136,5.94e-10,15;CL:0000213,9.00e-09,58;CL:0000215,9.00e-09,58;CL:0002078,3.59e-08,45;CL:0000071,1.76e-07,18;CL:0002546,1.76e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;8.24e-12;6!CL:0002546;2.11e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.01e-10!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.35e-08;8!UBERON:0004536;1.35e-08;8!UBERON:0006558;1.35e-08;8!UBERON:0004638;2.11e-07;18!UBERON:0001986;2.11e-07;18!UBERON:0004852;2.11e-07;18!UBERON:0000487;5.91e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.02e-08,8;UBERON:0004536,1.02e-08,8;UBERON:0006558,1.02e-08,8;UBERON:0004638,1.76e-07,18;UBERON:0001986,1.76e-07,18;UBERON:0004852,1.76e-07,18;UBERON:0000487,4.30e-07,22;UBERON:0002465,9.09e-07,10 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.563817616383885,2.00146596706261,1.34088328328186,0,0,1.89515962028049,0.783556884599516,0,1.39560233594486,0,0,0.247532705920093,0.331397375727916,0,0,0,0.975865597581014,0,0.204000691244253,0,0,0.410623275218653,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.724232594804119,0,0,0.945348171640679,0.443458794925128,0.702678285545008,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,1.72046919021225,1.04142150482278,1.69592382577203,0.419499436209906,0.825354125820202,0,2.32575083252396,2.13459757612026,1.67360306382335,0,1.52054421143703,1.22031028774085,1.10298924103761,0,1.51809538082936,1.34717623575702,1.35133776579987,1.53316637465883,0,0.366403487860815,0,0,0.436094052142534,1.49091585508596,0.506522046658319,0.264818361626438,0,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0.151357427644931,0.576175924479999,0,1.24864030732128,0.570471821544449,1.19558944441441,0.704606991862589,0.323745888736263,1.12360645361799,0.816616685019573,0.61417158655884,0.516628905878827,0,1.23633464639278,0.910161361938026,0,0.841680569770331,0.375355559615893,0.831192346452549,0.438977620880838,0.919463387397059,1.20190447125277,0.113432183160021,0.89694817844431,0.213557388818567,0.635795703478686,0.900273288253207,0.618315175430633,0.515281080091258,0.37223371266318,0.168776332241266,0.584622030967192,0.252433774244115,0.460249493211497,0.161646056818812,0.355009592516614,0.705264687593482,0.339121184620975,0.57978255948989,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0,0.738155454624648,0,0,0,0,0,0,0,0,0,1.86575485194663,0,0.502644862058154,1.11106134190236,0,0,0,0.231860809950154,0.117408694235822,2.02113026865503,2.77791307545966,2.47330397904978,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.567100388969546,0.447792613514241,0.290633938513962,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0.571652865261156,0.112131084345361,0,0.8800594298514,0.387815147273333,0,5.071816515336,0.26593811658487,1.04007436911366,0.257207374262142,1.41849132023278,1.0656887160644,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0.958499421966331,0,0,2.17171960001369,1.84928690295345,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,2.07970861530807,6.24501460790066,2.83864347061082,1.87426263988341,1.50473049863859,0,0,0.664225598535437,0.368738337083406,1.04260337361699,0.195801157462741,0,0,0,0,0.303127571446259,0,0.907170879989041,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.771048469013278,0.710246901252508,1.39616165223476,0,0.929683027679674,0,1.20303882181971,0.0920809889358963,0.229628896329213,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.510281115829547,1.0795795805107,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0.48335359146061,0.924291702687866,0.767518373630648,1.24052915236078,0.966782203814463,1.30515024522806,0.852266274161009,0.0890320356467374,0.330569830721956,0.576570202095319,0.127612712494584,0.50578890427775,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0,0.190630193923825,0,0,0.636406495851874,0.78494864019923,0.359744915166629,0.54907405947211,0.353437207037059,0.606547444719948,1.58510321173008,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.860468113224309,0.196498082026242,0,0.354761064070598,0.422215270595328,0.987884678879706,0.379473173765715,0.349934720244983,0.288666338176536,0,0,0.282431402330337,0,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,7.69983884210687,1.22520107990516,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,1.18785872333055,1.84296421259539,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,2.17727711363265,0.898683511473268,0,0,0.493217028184668,0,2.22273980289274,0,0,0,0,0,0.724999575434793,0.227586896570999,0.762760950878299,0.236387681767936,0,1.16641845353302,0,0,0,0,0,0,0,0,0.278847488557207,0.384751292518985,0.113942055847001,0,0.179515288819544,0,0.638002319463839,0.366390373607449,0,0,0,0,0,0,0,0,0,1.47698645169619,0.163232808159148,0,0,1.99052386215701,0.176915129006678,3.05515072466813,0,0.247127877893006,0.208843899010911,0,1.60515529459758,0,0,0.391329237864179,0,1.18375320854817,2.41981432097328,0,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0.313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| ||
|short_description=p16@CAV1 | |||
}} | }} |
Latest revision as of 07:33, 25 September 2015
Short description: | p16@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CAV1_5end |
Coexpression cluster: | C2875_Wilms_epithelioid_pharyngeal_neuroectodermal_Olfactory_Mesenchymal_lung |
Association with transcript: | 0bp_to_AF070648_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.97e-15 | 24 |
lymphangioblast | 5.64e-12 | 6 |
endothelial cell of lymphatic vessel | 5.64e-12 | 6 |
vascular lymphangioblast | 5.64e-12 | 6 |
endothelial cell | 2.20e-11 | 36 |
fat cell | 5.94e-10 | 15 |
lining cell | 9.00e-09 | 58 |
barrier cell | 9.00e-09 | 58 |
meso-epithelial cell | 3.59e-08 | 45 |
blood vessel endothelial cell | 1.76e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.76e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.02e-08 | 8 |
lymph vasculature | 1.02e-08 | 8 |
lymphatic part of lymphoid system | 1.02e-08 | 8 |
blood vessel endothelium | 1.76e-07 | 18 |
endothelium | 1.76e-07 | 18 |
cardiovascular system endothelium | 1.76e-07 | 18 |
simple squamous epithelium | 4.30e-07 | 22 |
lymphoid system | 9.09e-07 | 10 |