FFCP PHASE1:Hg19::chr6:47009996..47010035,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:47009996..47010035,-
|short_description=p2@GPR110
|description=CAGE_peak_2_at_GPR110_5end
|association_with_transcript=0bp_to_ENST00000371243,ENST000004748...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=266977 | |EntrezGene=266977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18990 | |HGNC=18990 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T601 | |UniProt=Q5T601 | ||
|association_with_transcript=0bp_to_ENST00000371243,ENST00000474800,ENST00000477771,ENST00000491283_5end | |||
|cluster_id=chr6:47009996..47010035,- | |||
|coexpression_cluster_id=C2862 | |||
|description=CAGE_peak_2_at_GPR110_5end | |||
|id=chr6:47009996..47010035,- | |||
|ontology_enrichment_celltype=CL:0002076!4.63e-29!43;CL:0000066!1.88e-25!254;CL:0000223!3.10e-21!59;CL:0002251!5.97e-13!21;CL:0002368!2.06e-11!13;CL:0002159!7.99e-09!13;CL:0002202!6.39e-08!9;CL:0002632!6.39e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.23e-16;42!CL:0002202;1.85e-11;9!CL:0002632;1.85e-11;9!CL:0002251;2.29e-10;20!CL:0002621;1.13e-07;3!CL:0002368;1.45e-07;13!CL:0000307;1.66e-07;3!CL:0002328;5.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.16e-23,42;CL:0000066,3.55e-22,253;CL:0000223,4.24e-18,58;CL:0002202,1.98e-11,9;CL:0002632,1.98e-11,9;CL:0002251,2.67e-10,20;CL:0002621,1.17e-07,3;CL:0002368,1.52e-07,13;CL:0000068,1.60e-07,3;CL:0000069,1.60e-07,3;CL:0000307,1.60e-07,3;CL:0000377,1.60e-07,3;CL:0002328,6.25e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.40e-09;58!CL:0000377;1.66e-07;3 | |||
|ontology_enrichment_disease=DOID:305!7.13e-17!106;DOID:1749!6.63e-16!14;DOID:299!1.40e-14!25;DOID:0050687!4.41e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.48e-15;14!DOID:299;2.24e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.55e-15,106;DOID:1749,5.54e-15,14;DOID:299,2.67e-12,25;DOID:0050687,5.03e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.70e-25!169;UBERON:0000925!5.70e-25!169;UBERON:0006595!5.70e-25!169;UBERON:0001007!1.74e-20!155;UBERON:0001555!1.74e-20!155;UBERON:0007026!1.74e-20!155;UBERON:0001004!3.95e-19!72;UBERON:0000464!3.97e-17!104;UBERON:0000161!1.37e-16!35;UBERON:0005911!6.78e-15!82;UBERON:0000466!2.24e-14!126;UBERON:0000166!5.97e-13!21;UBERON:0004921!9.58e-13!129;UBERON:0004185!9.58e-13!129;UBERON:0005153!9.76e-13!37;UBERON:0005181!1.25e-12!35;UBERON:0000077!3.62e-12!130;UBERON:0005178!7.36e-12!34;UBERON:0002224!7.36e-12!34;UBERON:0000065!7.86e-12!53;UBERON:0001008!7.97e-12!45;UBERON:0006554!5.78e-11!44;UBERON:0005177!7.68e-11!107;UBERON:0000062!2.73e-10!511;UBERON:0000165!5.83e-10!28;UBERON:0000930!5.83e-10!28;UBERON:0005156!7.87e-10!59;UBERON:0000990!7.87e-10!59;UBERON:0001041!2.22e-09!98;UBERON:0005157!2.40e-09!51;UBERON:0003100!9.38e-09!41;UBERON:0003133!3.07e-08!48;UBERON:0000915!3.72e-08!52;UBERON:0004175!4.60e-08!25;UBERON:0003064!4.99e-08!37;UBERON:0000344!5.43e-08!12;UBERON:0000058!6.34e-08!26;UBERON:0002048!7.11e-08!22;UBERON:0000117!7.11e-08!22;UBERON:0000171!7.11e-08!22;UBERON:0000170!7.11e-08!22;UBERON:0005597!7.11e-08!22;UBERON:0000118!7.11e-08!22;UBERON:0008947!8.78e-08!38;UBERON:0003258!8.78e-08!38;UBERON:0007196!9.88e-08!14;UBERON:0001558!9.88e-08!14;UBERON:0002553!1.41e-07!70;UBERON:0002294!1.57e-07!7;UBERON:0001173!1.57e-07!7;UBERON:0004912!1.57e-07!7;UBERON:0000072!1.71e-07!46;UBERON:0000481!1.75e-07!347;UBERON:0009569!1.80e-07!113;UBERON:0003104!2.19e-07!238;UBERON:0009142!2.19e-07!238;UBERON:0003102!3.66e-07!95;UBERON:0000467!4.18e-07!625;UBERON:0000480!4.82e-07!626;UBERON:0000365!5.45e-07!5;UBERON:0002046!6.07e-07!5;UBERON:0004117!6.07e-07!5;UBERON:0007689!6.07e-07!5;UBERON:0007123!6.07e-07!5;UBERON:0003091!6.07e-07!5;UBERON:0004807!7.41e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.08e-10;15!UBERON:0001558;1.08e-10;15!UBERON:0002294;1.60e-10;7!UBERON:0001173;1.60e-10;7!UBERON:0005178;1.99e-10;34!UBERON:0002224;1.99e-10;34!UBERON:0005181;3.27e-09;35!UBERON:0004807;1.33e-08;22!UBERON:0004175;2.07e-08;21!UBERON:0003126;3.88e-08;7!UBERON:0001005;3.88e-08;7!UBERON:0006554;7.25e-08;30!UBERON:0001008;7.25e-08;30!UBERON:0000486;7.37e-08;12!UBERON:0001949;1.13e-07;3!UBERON:0005911;1.39e-07;36!UBERON:0000058;1.90e-07;10!UBERON:0000344;2.41e-07;20!UBERON:0004815;5.56e-07;3!UBERON:0002031;5.56e-07;3!UBERON:0001723;6.72e-07;3!UBERON:0001033;6.72e-07;3!UBERON:0000165;7.28e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.39e-17,160;UBERON:0000925,1.39e-17,160;UBERON:0006595,1.39e-17,160;UBERON:0001007,1.40e-17,145;UBERON:0001555,1.40e-17,145;UBERON:0007026,1.40e-17,145;UBERON:0005911,5.01e-14,82;UBERON:0000161,8.14e-13,36;UBERON:0004921,9.65e-12,118;UBERON:0005177,1.47e-11,101;UBERON:0005153,2.35e-11,37;UBERON:0005178,3.13e-11,34;UBERON:0002224,3.13e-11,34;UBERON:0005181,8.44e-11,35;UBERON:0007196,1.17e-10,15;UBERON:0001558,1.17e-10,15;UBERON:0001004,1.62e-10,74;UBERON:0001008,4.89e-10,48;UBERON:0001041,7.62e-10,87;UBERON:0005157,2.95e-09,47;UBERON:0006554,4.74e-09,47;UBERON:0000065,1.19e-08,54;UBERON:0000072,2.54e-08,47;UBERON:0008947,3.22e-08,38;UBERON:0003258,3.22e-08,38;UBERON:0003126,3.95e-08,7;UBERON:0001005,3.95e-08,7;UBERON:0002294,4.03e-08,9;UBERON:0001173,4.03e-08,9;UBERON:0004912,4.03e-08,9;UBERON:0000166,1.06e-07,22;UBERON:0001949,1.17e-07,3;UBERON:0005156,1.83e-07,59;UBERON:0000990,1.83e-07,59;UBERON:0000344,2.29e-07,20;UBERON:0004815,6.25e-07,3;UBERON:0002031,6.25e-07,3;UBERON:0001723,8.04e-07,3;UBERON:0001033,8.04e-07,3;UBERON:0010056,8.04e-07,3;UBERON:0004175,8.57e-07,25 | |||
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| ||
|short_description=p2@GPR110 | |||
}} | }} |
Latest revision as of 03:37, 19 September 2015
Short description: | p2@GPR110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPR110_5end |
Coexpression cluster: | C2862_lung_bronchioalveolar_epidermoid_prostate_mucinous_bile_squamous |
Association with transcript: | 0bp_to_ENST00000371243, ENST00000474800, ENST00000477771, ENST00000491283_5end |
EntrezGene: | GPR110 |
HGNC: | 18990 |
UniProt: | Q5T601 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.16e-23 | 42 |
epithelial cell | 3.55e-22 | 253 |
endodermal cell | 4.24e-18 | 58 |
epithelial cell of tracheobronchial tree | 1.98e-11 | 9 |
epithelial cell of lower respiratory tract | 1.98e-11 | 9 |
epithelial cell of alimentary canal | 2.67e-10 | 20 |
gingival epithelial cell | 1.17e-07 | 3 |
respiratory epithelial cell | 1.52e-07 | 13 |
duct epithelial cell | 1.60e-07 | 3 |
branched duct epithelial cell | 1.60e-07 | 3 |
tracheal epithelial cell | 1.60e-07 | 3 |
tracheoblast | 1.60e-07 | 3 |
bronchial epithelial cell | 6.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.55e-15 | 106 |
squamous cell carcinoma | 5.54e-15 | 14 |
adenocarcinoma | 2.67e-12 | 25 |
cell type cancer | 5.03e-09 | 143 |