FFCP PHASE1:Hg19::chr6:46889608..46889626,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:46889608..46889626,-
|short_description=p4@GPR116
|description=CAGE_peak_4_at_GPR116_5end
|association_with_transcript=87bp_to_ENST00000283296,ENST00000362...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221395 | |EntrezGene=221395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19030 | |HGNC=19030 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZF2,E9PBS6 | |UniProt=Q8IZF2,E9PBS6 | ||
|association_with_transcript=87bp_to_ENST00000283296,ENST00000362015,ENST00000456426,NM_001098518,uc003oyo.3,uc003oyp.3,uc003oyr.2_5end | |||
|cluster_id=chr6:46889608..46889626,- | |||
|coexpression_cluster_id=C1443 | |||
|description=CAGE_peak_4_at_GPR116_5end | |||
|id=chr6:46889608..46889626,- | |||
|ontology_enrichment_celltype=CL:0002139!9.63e-10!24;CL:0000115!1.36e-08!35;CL:0005020!2.48e-08!6;CL:0002138!2.48e-08!6;CL:0005022!2.48e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;4.44e-10;6!CL:0002139;3.76e-09;24!CL:0000115;4.39e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.96e-10,6;CL:0002138,3.96e-10,6;CL:0005022,3.96e-10,6;CL:0002139,3.70e-09,24;CL:0000115,1.53e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.83e-10;82!CL:0005022;4.44e-10;6!UBERON:0004872;3.43e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;9.76e-22;34!UBERON:0003528;1.54e-21;34!UBERON:0002020;1.54e-21;34!UBERON:0001869;2.30e-21;32!UBERON:0002791;3.95e-21;32!UBERON:0002619;6.91e-20;22!UBERON:0007023;2.14e-19;114!UBERON:0002780;1.15e-18;41!UBERON:0001890;1.15e-18;41!UBERON:0001950;5.59e-18;20!UBERON:0000073;4.39e-17;53!UBERON:0002616;4.39e-17;53!UBERON:0000956;7.63e-17;25!UBERON:0000203;7.63e-17;25!UBERON:0001017;5.71e-12;75!UBERON:0000955;7.14e-12;68!UBERON:0000125;1.51e-10;9!UBERON:0002308;1.51e-10;9!UBERON:0002420;2.87e-10;9!UBERON:0007245;2.87e-10;9!UBERON:0010009;2.87e-10;9!UBERON:0010011;2.87e-10;9!UBERON:0000454;2.87e-10;9!UBERON:0001016;1.33e-09;83!UBERON:0000200;6.21e-09;6!UBERON:0009663;2.28e-08;7!UBERON:0004732;7.09e-08;13!UBERON:0002298;1.03e-07;6!UBERON:0001473;3.09e-07;8!UBERON:0004536;3.09e-07;8!UBERON:0006558;3.09e-07;8!UBERON:0002465;5.36e-07;10!UBERON:0004733;7.19e-07;12!UBERON:0002028;7.19e-07;12!UBERON:0001871;9.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.71e-79,114;UBERON:0001049,2.28e-34,56;UBERON:0005068,2.28e-34,56;UBERON:0006241,2.28e-34,56;UBERON:0007135,2.28e-34,56;UBERON:0000073,1.47e-31,53;UBERON:0002616,1.47e-31,53;UBERON:0002780,4.09e-26,41;UBERON:0001890,4.09e-26,41;UBERON:0003080,4.09e-26,41;UBERON:0006240,4.09e-26,41;UBERON:0003075,4.79e-26,82;UBERON:0007284,4.79e-26,82;UBERON:0000955,1.52e-25,68;UBERON:0006238,1.52e-25,68;UBERON:0001017,1.53e-25,81;UBERON:0003528,1.59e-25,34;UBERON:0002020,1.59e-25,34;UBERON:0001893,2.64e-25,34;UBERON:0002346,4.02e-24,86;UBERON:0001869,1.02e-23,32;UBERON:0002791,1.96e-23,32;UBERON:0001016,8.79e-23,89;UBERON:0004111,9.47e-22,240;UBERON:0010314,4.82e-20,132;UBERON:0002619,7.24e-20,22;UBERON:0000025,1.32e-19,192;UBERON:0010371,2.60e-18,104;UBERON:0001950,6.15e-18,20;UBERON:0000956,7.95e-17,25;UBERON:0000203,7.95e-17,25;UBERON:0003056,1.06e-16,61;UBERON:0011216,1.91e-15,223;UBERON:0000125,1.80e-10,9;UBERON:0002308,1.80e-10,9;UBERON:0002420,2.82e-10,9;UBERON:0007245,2.82e-10,9;UBERON:0010009,2.82e-10,9;UBERON:0010011,2.82e-10,9;UBERON:0000454,2.82e-10,9;UBERON:0004121,6.30e-10,171;UBERON:0000924,6.30e-10,171;UBERON:0006601,6.30e-10,171;UBERON:0000483,6.39e-10,306;UBERON:0000119,1.27e-09,309;UBERON:0003076,2.63e-09,15;UBERON:0003057,2.63e-09,15;UBERON:0000200,6.74e-09,6;UBERON:0009663,2.37e-08,7;UBERON:0004732,1.01e-07,13;UBERON:0002298,1.26e-07,6;UBERON:0001473,2.85e-07,8;UBERON:0004536,2.85e-07,8;UBERON:0006558,2.85e-07,8;UBERON:0002465,4.35e-07,10;UBERON:0004733,9.91e-07,12;UBERON:0002028,9.91e-07,12;UBERON:0007277,9.91e-07,12 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0,0,2.45733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0,0,0,0,0.79504962946682,0,0,0,0,0.275118041940067,0.417989933073621,39.0209306345687,21.3459757612026,33.8067818892317,6.44526907374635,2.28081631715554,6.34561349625241,0,0,7.5011771758627,5.16417557040191,1.23872628531654,0,2.84779697870439,5.67925406184263,0,0,0,14.4121865991642,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,1.40241773803446,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0.939269553886573,12.2711480596913,4.62985512576611,7.99067439385313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,2.60588947434988,0,0,1.50719688529793,1.74306691720059,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07423381301644,0,0.128139149255701,0,0.321707842287215,0,0,0.355123450626254,0.410635780069046,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,2.2112181685947,13.3867867983326,0,0,0,0,0,0,0,0,0,0,0,6.4915837338065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17790904272285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8416052661202,0,0,0,0.71623345421307,0,0,2.98244294329889,3.09472716103128,0,0,0,1.39473591775749,0.552567831062295,0,0.102268682502155,0,0,0,0,0,2.86065876347107,0,3.33410970433911,3.87733098438087,3.6179558283122,3.99227596002388,0,0,15.9499906595655,0,0,0,0,0,0,2.65722415744152,2.41192877250816,1.52581736317083,1.10579259931225,1.18219047581419,3.29078095730959,0,0,3.69361240818226,0,0,0,0,0.638002319463839,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21143911258348,3.05515072466813,0,0,0,1.61762719153625,8.02577647298789,0.937057782901357,0,0,0,2.76209081994573,2.41981432097328,0,4.04394109622323,0,0,0,0,0,0,0,0.416024019039416,0,0,0,3.66926003308263,0,0,0,0,2.03676934625681,0,2.25980740780532,0,0,5.25479606433793,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,4.38097212454378,0,0,0,16.477661675063,7.10397314436219,26.5613019093421,6.19004901546872,8.15529491459485,18.3000595102335,8.59948447830096,2.52209918479682,0,0,0,0,0,0,2.38568906942791,3.94989877723569,0,0,0,0,0,5.34596098590617,0,6.30445658393585,2.98991152369489,0,0,0,4.2881719582402,33.766690488637,0,0,0,0,0,0,0.340776043570843,0,3.51725360827398,1.32506888912221,4.39562051629272,3.04134984008187,0,7.75296524548339,19.1149468496173,3.77290332239198,20.2977137120126,1.9846640872478,0,0,0,2.72008901684737,8.0220766087264,2.75711019087115,2.95085367638824,0,5.31640907980192,6.10131324509816,7.01069211956399,2.86704597845036,2.3295100822739,4.09836259413131,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0.414706207840855,0.53168342911599,5.73919567992907,0.300515217994437,14.0897928502454,1.22061219961398,3.27327586564607,0.107410557042488,0,5.97143833047924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11556213761404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,3.78952428069111,5.6678630530234,4.46974805360024,5.12790910601888,0.504143392443436,2.76629009856872,2.90656162137332,4.28308260777463,0,0,0,0,0,0,0,2.78278214892252,0,1.56302802246618,0,0,0,4.38994300019565,3.12431239445539,6.40729069153671,3.6781169912466,0,1.64477330057155,8.435590032618,0,0,1.60710550763486,3.36283722218824,0.606965604236632,0.682986574053893,3.10458295569236,0,0,3.46645638181842,3.68327531951955,0,0,1.96232732126285,1.72827148907602,0,3.65263488203798,0,0,2.7875852228896,0,0,0,0,0,0,0,0,0,0,3.81048345171836,0,0,0,0,0,0,8.41657488344263,3.79852385368114,1.1598144313382,2.4285549652957,0,0,0,0,0,0.301925687133347,1.15761237161917,1.09279780251979,0,2.69663153929296,0,4.90771167787363,1.78227840196252,2.5359343655004,0,13.0637645991996,12.0536250510589,0,0,0,0,5.11235471772562,0.917458566809082,2.29343333042322,0,4.1474809016458,0.436350690340377,1.5870805215462,0,0,0,0,0,0,0,0,0,0,2.5006970412019,0.535928260312357,4.1458471972939,1.96522692137601,3.62497769231668,2.14257988317366,0.322944549180031,0.558672428662721,1.56984607612859,6.49201014437282,3.63810940124795,5.22520194952707,1.71116650542641,0.606168477131288,2.51027718874367,5.65522606128223,0,0,0,0,7.03922827210363,2.07810455110873,1.62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| ||
|short_description=p4@GPR116 | |||
}} | }} |
Latest revision as of 03:32, 19 September 2015
Short description: | p4@GPR116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPR116_5end |
Coexpression cluster: | C1443_Endothelial_lung_left_heart_adipose_spleen_mature |
Association with transcript: | 87bp_to_ENST00000283296, ENST00000362015, ENST00000456426, NM_001098518, uc003oyo.3, uc003oyp.3, uc003oyr.2_5end |
EntrezGene: | GPR116 |
HGNC: | 19030 |
UniProt: | Q8IZF2E9PBS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.96e-10 | 6 |
endothelial cell of lymphatic vessel | 3.96e-10 | 6 |
vascular lymphangioblast | 3.96e-10 | 6 |
endothelial cell of vascular tree | 3.70e-09 | 24 |
endothelial cell | 1.53e-08 | 36 |